LmxM.08_29.2240 | Aminopeptidase M1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008237      GO:0008270      

  • Computed_GO_Functions:  metallopeptidase activity      zinc ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.08_29.2240OTHER0.9998970.0000720.000031
No Results

  • Fasta :-

    >LmxM.08_29.2240 MPMTTSVKLENPYVPSGYDLRVTVDLSTWSYTAVETVHLQRCPAFPDGDTIQLHAAPSIE VTSVKGATLERRDDTADTLVLKLDAETMALAVPTLYFEFTHVIQKELRGFYQVSFKHGGK QHRMASTHFEPVSARLFYICHDEPAQRADFTLTVTLPKSEEHYVVLSNSPLGSKMVKGDT VVHTFQTVPRCPPYLTACVVGELEHISTVVNGIPVSVYATLGKAGRAQFALTTTVFALEF FEKFFQCKYPLPKLDVVAIPDFPIGGMENWGCITCAEAILVDPQQSSAEAKRGASNLICH EVSHNWFGNLVAINWWEGLWLKEGFASWCGYYATHAYAPQWNALDAAALKVVSALNDDIY EHSHPVEVPIHDPGDITQIFDSISYSKGMGLVFMLQAFLGDKWGSAVAHYIKKHQFRDTK TVQLWEALEESSQLPITEALTSFTTQMGYPMIHVSRQDGNTIVVTQEPCRFVTASEKGMR TWCVPLVVEGMDASVGRATPMLRGDTPMEVTLPAGIAKGAFANVNPRRTGFYRCRYDNPT FDAWLANYRQLSPADRRSLFSDTLAAIRMGYDDIPRLARIATVVSAFETDIYVLREYLQT MGTFLHSFDDACLTKSLTKELHGFLIPVAESLIGVIPQDDSASLRRNFYLDASISTLLSS GEPAEVSAHPLIQWALQQAQGFLSGADFNAGTLSACLRAWLRRADPTDLPARNAQLYAKL QEVDGNEELCRSLVLAMTSSPSVDFALDIMKKCIENDGVRSQYGEHVFWSLASNPAISGE EVWQAFQQNFDAVNVQWGGGQFRIQAIVSFLGEALFGDAAADEFEAFFETHPLPNARLAI GRAAEELRIRSWLNKTWKASLPHVFCRH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/237 Sequence name : 237 Sequence length : 868 VALUES OF COMPUTED PARAMETERS Coef20 : 3.186 CoefTot : -0.132 ChDiff : -25 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.229 1.553 0.165 0.671 MesoH : 0.067 0.654 -0.196 0.330 MuHd_075 : 1.615 6.188 1.280 1.498 MuHd_095 : 7.148 5.445 2.595 2.624 MuHd_100 : 6.974 7.213 3.014 2.466 MuHd_105 : 7.422 8.759 3.364 2.176 Hmax_075 : 7.467 4.783 0.474 3.057 Hmax_095 : 7.612 3.200 -0.209 2.432 Hmax_100 : 6.900 4.300 -0.375 2.660 Hmax_105 : 7.583 6.650 -0.369 3.313 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9851 0.0149 DFMC : 0.9751 0.0249
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 868 LmxM.08_29.2240 MPMTTSVKLENPYVPSGYDLRVTVDLSTWSYTAVETVHLQRCPAFPDGDTIQLHAAPSIEVTSVKGATLERRDDTADTLV 80 LKLDAETMALAVPTLYFEFTHVIQKELRGFYQVSFKHGGKQHRMASTHFEPVSARLFYICHDEPAQRADFTLTVTLPKSE 160 EHYVVLSNSPLGSKMVKGDTVVHTFQTVPRCPPYLTACVVGELEHISTVVNGIPVSVYATLGKAGRAQFALTTTVFALEF 240 FEKFFQCKYPLPKLDVVAIPDFPIGGMENWGCITCAEAILVDPQQSSAEAKRGASNLICHEVSHNWFGNLVAINWWEGLW 320 LKEGFASWCGYYATHAYAPQWNALDAAALKVVSALNDDIYEHSHPVEVPIHDPGDITQIFDSISYSKGMGLVFMLQAFLG 400 DKWGSAVAHYIKKHQFRDTKTVQLWEALEESSQLPITEALTSFTTQMGYPMIHVSRQDGNTIVVTQEPCRFVTASEKGMR 480 TWCVPLVVEGMDASVGRATPMLRGDTPMEVTLPAGIAKGAFANVNPRRTGFYRCRYDNPTFDAWLANYRQLSPADRRSLF 560 SDTLAAIRMGYDDIPRLARIATVVSAFETDIYVLREYLQTMGTFLHSFDDACLTKSLTKELHGFLIPVAESLIGVIPQDD 640 SASLRRNFYLDASISTLLSSGEPAEVSAHPLIQWALQQAQGFLSGADFNAGTLSACLRAWLRRADPTDLPARNAQLYAKL 720 QEVDGNEELCRSLVLAMTSSPSVDFALDIMKKCIENDGVRSQYGEHVFWSLASNPAISGEEVWQAFQQNFDAVNVQWGGG 800 QFRIQAIVSFLGEALFGDAAADEFEAFFETHPLPNARLAIGRAAEELRIRSWLNKTWKASLPHVFCRH 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 .................................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.08_29.2240 8 PMTTSVK|LE 0.058 . LmxM.08_29.2240 21 PSGYDLR|VT 0.075 . LmxM.08_29.2240 41 ETVHLQR|CP 0.068 . LmxM.08_29.2240 65 IEVTSVK|GA 0.074 . LmxM.08_29.2240 71 KGATLER|RD 0.082 . LmxM.08_29.2240 72 GATLERR|DD 0.139 . LmxM.08_29.2240 82 ADTLVLK|LD 0.054 . LmxM.08_29.2240 105 FTHVIQK|EL 0.061 . LmxM.08_29.2240 108 VIQKELR|GF 0.098 . LmxM.08_29.2240 116 FYQVSFK|HG 0.085 . LmxM.08_29.2240 120 SFKHGGK|QH 0.062 . LmxM.08_29.2240 123 HGGKQHR|MA 0.169 . LmxM.08_29.2240 135 FEPVSAR|LF 0.085 . LmxM.08_29.2240 147 HDEPAQR|AD 0.088 . LmxM.08_29.2240 158 LTVTLPK|SE 0.076 . LmxM.08_29.2240 174 NSPLGSK|MV 0.062 . LmxM.08_29.2240 177 LGSKMVK|GD 0.076 . LmxM.08_29.2240 190 TFQTVPR|CP 0.087 . LmxM.08_29.2240 223 VYATLGK|AG 0.065 . LmxM.08_29.2240 226 TLGKAGR|AQ 0.109 . LmxM.08_29.2240 243 ALEFFEK|FF 0.067 . LmxM.08_29.2240 248 EKFFQCK|YP 0.075 . LmxM.08_29.2240 253 CKYPLPK|LD 0.065 . LmxM.08_29.2240 291 QSSAEAK|RG 0.074 . LmxM.08_29.2240 292 SSAEAKR|GA 0.372 . LmxM.08_29.2240 322 WEGLWLK|EG 0.059 . LmxM.08_29.2240 350 LDAAALK|VV 0.076 . LmxM.08_29.2240 387 DSISYSK|GM 0.070 . LmxM.08_29.2240 402 QAFLGDK|WG 0.062 . LmxM.08_29.2240 412 AVAHYIK|KH 0.054 . LmxM.08_29.2240 413 VAHYIKK|HQ 0.103 . LmxM.08_29.2240 417 IKKHQFR|DT 0.240 . LmxM.08_29.2240 420 HQFRDTK|TV 0.152 . LmxM.08_29.2240 456 PMIHVSR|QD 0.102 . LmxM.08_29.2240 470 VTQEPCR|FV 0.187 . LmxM.08_29.2240 477 FVTASEK|GM 0.057 . LmxM.08_29.2240 480 ASEKGMR|TW 0.088 . LmxM.08_29.2240 497 MDASVGR|AT 0.113 . LmxM.08_29.2240 503 RATPMLR|GD 0.102 . LmxM.08_29.2240 518 LPAGIAK|GA 0.106 . LmxM.08_29.2240 527 FANVNPR|RT 0.100 . LmxM.08_29.2240 528 ANVNPRR|TG 0.104 . LmxM.08_29.2240 533 RRTGFYR|CR 0.101 . LmxM.08_29.2240 535 TGFYRCR|YD 0.107 . LmxM.08_29.2240 549 AWLANYR|QL 0.096 . LmxM.08_29.2240 556 QLSPADR|RS 0.079 . LmxM.08_29.2240 557 LSPADRR|SL 0.160 . LmxM.08_29.2240 568 DTLAAIR|MG 0.070 . LmxM.08_29.2240 576 GYDDIPR|LA 0.083 . LmxM.08_29.2240 579 DIPRLAR|IA 0.247 . LmxM.08_29.2240 595 TDIYVLR|EY 0.097 . LmxM.08_29.2240 615 DDACLTK|SL 0.108 . LmxM.08_29.2240 619 LTKSLTK|EL 0.061 . LmxM.08_29.2240 645 DDSASLR|RN 0.090 . LmxM.08_29.2240 646 DSASLRR|NF 0.097 . LmxM.08_29.2240 698 TLSACLR|AW 0.093 . LmxM.08_29.2240 702 CLRAWLR|RA 0.083 . LmxM.08_29.2240 703 LRAWLRR|AD 0.185 . LmxM.08_29.2240 712 PTDLPAR|NA 0.080 . LmxM.08_29.2240 719 NAQLYAK|LQ 0.067 . LmxM.08_29.2240 731 GNEELCR|SL 0.131 . LmxM.08_29.2240 751 FALDIMK|KC 0.055 . LmxM.08_29.2240 752 ALDIMKK|CI 0.096 . LmxM.08_29.2240 760 IENDGVR|SQ 0.101 . LmxM.08_29.2240 803 WGGGQFR|IQ 0.082 . LmxM.08_29.2240 837 HPLPNAR|LA 0.103 . LmxM.08_29.2240 842 ARLAIGR|AA 0.121 . LmxM.08_29.2240 848 RAAEELR|IR 0.096 . LmxM.08_29.2240 850 AEELRIR|SW 0.099 . LmxM.08_29.2240 855 IRSWLNK|TW 0.104 . LmxM.08_29.2240 858 WLNKTWK|AS 0.071 . LmxM.08_29.2240 867 LPHVFCR|H- 0.172 . ____________________________^_________________

  • Fasta :-

    >LmxM.08_29.2240 ATGCCAATGACAACGAGCGTCAAATTGGAGAACCCTTATGTGCCCTCTGGGTATGACCTA CGCGTCACGGTGGACCTCTCCACGTGGAGCTACACAGCTGTGGAGACGGTGCACCTGCAG CGCTGTCCTGCCTTCCCAGACGGCGACACGATCCAGCTGCATGCAGCCCCGTCGATCGAG GTGACCTCAGTGAAGGGAGCCACCCTGGAACGGCGCGACGATACGGCGGACACGCTTGTG CTGAAGCTGGACGCGGAGACAATGGCGTTGGCGGTCCCTACGCTGTACTTTGAGTTCACG CATGTAATCCAAAAGGAGTTGCGCGGCTTCTACCAGGTGAGCTTCAAGCATGGCGGAAAG CAGCACCGCATGGCCTCCACGCACTTCGAGCCCGTGTCAGCGCGGCTTTTCTACATCTGC CATGACGAGCCGGCGCAGCGCGCGGATTTCACCCTGACCGTGACACTGCCAAAGTCGGAG GAGCACTACGTCGTTCTTTCCAACAGTCCTCTGGGGTCGAAGATGGTGAAGGGGGACACG GTGGTGCACACCTTCCAAACGGTGCCCAGGTGCCCGCCATACCTGACAGCCTGCGTCGTC GGTGAGCTGGAGCACATCAGCACCGTAGTCAACGGCATCCCGGTCAGCGTGTATGCGACG CTGGGCAAGGCGGGACGGGCGCAGTTTGCCCTTACCACCACCGTGTTCGCTCTCGAGTTC TTCGAGAAGTTTTTCCAGTGCAAGTACCCGCTACCAAAGCTGGACGTCGTTGCCATTCCC GACTTCCCGATTGGTGGGATGGAGAACTGGGGCTGCATAACGTGCGCTGAGGCGATACTG GTGGACCCGCAGCAGTCGAGCGCGGAGGCGAAGCGCGGCGCGTCGAACCTGATATGCCAC GAAGTCTCGCACAACTGGTTTGGTAACCTTGTTGCCATCAACTGGTGGGAGGGCCTGTGG CTCAAGGAGGGCTTTGCGTCGTGGTGCGGCTACTACGCGACGCACGCATACGCGCCGCAG TGGAATGCTCTGGACGCTGCAGCGCTGAAGGTGGTCTCGGCGCTGAACGACGACATATAC GAGCACAGTCACCCCGTTGAGGTGCCCATCCACGACCCTGGAGATATTACCCAGATCTTC GACAGTATCAGCTACAGCAAGGGCATGGGCCTGGTTTTCATGTTGCAGGCGTTCCTTGGC GATAAGTGGGGATCTGCCGTGGCACACTACATCAAAAAGCACCAATTCAGGGACACCAAG ACGGTGCAACTCTGGGAGGCGCTGGAGGAGTCGTCGCAGCTGCCCATTACCGAGGCTCTC ACCAGCTTCACTACGCAGATGGGCTACCCAATGATCCACGTCTCCAGACAGGACGGGAAC ACCATCGTGGTGACGCAAGAGCCGTGCCGCTTCGTCACGGCGTCGGAGAAGGGTATGCGG ACCTGGTGCGTGCCTCTTGTCGTAGAGGGCATGGACGCTAGCGTTGGGCGTGCGACACCG ATGCTGCGCGGCGACACGCCCATGGAGGTGACCCTGCCGGCCGGCATTGCGAAGGGGGCC TTTGCCAACGTCAACCCGCGCCGTACCGGCTTCTACCGCTGCCGGTACGACAATCCCACC TTCGATGCATGGCTCGCCAACTACAGGCAGCTTTCCCCCGCCGATCGCCGCTCCCTCTTT TCCGACACGCTGGCCGCGATTCGGATGGGTTACGATGACATTCCGCGGCTGGCGAGGATC GCTACGGTCGTTTCGGCGTTCGAGACGGATATCTATGTGCTGCGAGAGTACCTGCAGACC ATGGGTACCTTCCTCCACTCTTTCGACGATGCTTGTCTGACAAAGAGCCTGACCAAGGAG CTGCATGGTTTCCTCATCCCGGTCGCCGAGTCCCTCATAGGAGTCATCCCGCAGGACGAC AGCGCGTCGCTGCGCCGCAACTTTTACCTCGACGCCAGTATCTCCACGCTGTTGAGCAGC GGGGAGCCGGCGGAGGTCTCTGCCCACCCGCTGATCCAGTGGGCGCTGCAGCAAGCACAG GGCTTCCTCTCAGGGGCGGATTTCAACGCTGGCACGCTCAGCGCCTGCCTGCGTGCCTGG CTTCGCAGGGCCGACCCCACCGACCTTCCAGCGCGCAACGCGCAACTGTACGCGAAACTG CAGGAGGTGGACGGCAACGAGGAGCTGTGCCGTTCGCTGGTCCTGGCCATGACGAGCAGC CCCTCAGTTGACTTTGCGCTGGACATCATGAAAAAATGCATCGAGAACGACGGCGTCCGC AGCCAGTACGGCGAGCATGTCTTCTGGAGCCTCGCGTCGAATCCAGCGATCTCGGGCGAG GAGGTGTGGCAGGCATTTCAGCAGAACTTCGACGCCGTGAACGTGCAGTGGGGTGGCGGC CAGTTCCGCATCCAGGCTATTGTGAGCTTTCTGGGTGAGGCGCTCTTTGGCGATGCTGCG GCGGACGAGTTCGAGGCCTTCTTCGAGACGCATCCACTTCCTAATGCCCGCCTCGCCATC GGCCGCGCCGCTGAGGAGCTGCGCATTCGCTCGTGGTTGAACAAAACATGGAAGGCTTCC CTACCTCACGTATTCTGCCGTCACTAA
  • Download Fasta

  • Fasta :-

    MPMTTSVKLENPYVPSGYDLRVTVDLSTWSYTAVETVHLQRCPAFPDGDTIQLHAAPSIE VTSVKGATLERRDDTADTLVLKLDAETMALAVPTLYFEFTHVIQKELRGFYQVSFKHGGK QHRMASTHFEPVSARLFYICHDEPAQRADFTLTVTLPKSEEHYVVLSNSPLGSKMVKGDT VVHTFQTVPRCPPYLTACVVGELEHISTVVNGIPVSVYATLGKAGRAQFALTTTVFALEF FEKFFQCKYPLPKLDVVAIPDFPIGGMENWGCITCAEAILVDPQQSSAEAKRGASNLICH EVSHNWFGNLVAINWWEGLWLKEGFASWCGYYATHAYAPQWNALDAAALKVVSALNDDIY EHSHPVEVPIHDPGDITQIFDSISYSKGMGLVFMLQAFLGDKWGSAVAHYIKKHQFRDTK TVQLWEALEESSQLPITEALTSFTTQMGYPMIHVSRQDGNTIVVTQEPCRFVTASEKGMR TWCVPLVVEGMDASVGRATPMLRGDTPMEVTLPAGIAKGAFANVNPRRTGFYRCRYDNPT FDAWLANYRQLSPADRRSLFSDTLAAIRMGYDDIPRLARIATVVSAFETDIYVLREYLQT MGTFLHSFDDACLTKSLTKELHGFLIPVAESLIGVIPQDDSASLRRNFYLDASISTLLSS GEPAEVSAHPLIQWALQQAQGFLSGADFNAGTLSACLRAWLRRADPTDLPARNAQLYAKL QEVDGNEELCRSLVLAMTSSPSVDFALDIMKKCIENDGVRSQYGEHVFWSLASNPAISGE EVWQAFQQNFDAVNVQWGGGQFRIQAIVSFLGEALFGDAAADEFEAFFETHPLPNARLAI GRAAEELRIRSWLNKTWKASLPHVFCRH

  • title: Zn binding site
  • coordinates: H300,H304,E323
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.08_29.2240552 SYRQLSPADR0.997unspLmxM.08_29.2240552 SYRQLSPADR0.997unspLmxM.08_29.2240552 SYRQLSPADR0.997unspLmxM.08_29.224063 SIEVTSVKGA0.991unspLmxM.08_29.2240506 TLRGDTPMEV0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India