LmxM.09.0770 | oligopeptidase b

_IDPredictionOTHERSPmTPCS_Position
LmxM.09.0770OTHER0.9977630.0001860.002051
No Results

  • Fasta :-

    >LmxM.09.0770 MSSGNSIAASVQPPIAAKKPHRVTFGYVEGEDRGPNPMNPPRHHEDPYFWMRDDDRKDPA VIEHLKKEKAYFEACSSDMTQLRDDIYTEHISHIKEDDMSAPYLYGQYRYYTREVKGKSY KIYCRVPKDKEPGDVAVEEVVIDVNKVAEGKPFCDVMEVEPAPPEHDLVAFSVDMSGNEV YAIEFKHMSDPCRTVADTVSGTNGEIVWGPDHTSFFYVTKDETLRENKVWRHVMGRPQSE DVCLYEENNPLFRAFMYKAADTNTLCIGSQSSETTEVHLLDLRQGNAHNTVEVVRPREKG VRYDVQMHGTRHLLILTNKDGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMENIAVRSNY LVVTGRRGGLTRIWTMMVDPQDGVFKPGAELREVMMEEPIFTVHLVESQMLEYEESTFRM EYSSLATPNTWFNVSPQDHSRTVVKVREVGGGFDAANYKVERRFATAPDQTKIPLSLVYH KDLDMTQPQPCMLYGYGSYGISMDPQFTIQHLPYCDRGMIYVIAHIRGGSEMGRAWYEIG AKYLTKRNTFSDFIAAAEFLVDAKLTTPSQLACEGRSAGGLLVGAVLNMRPDLFKVALAG VPFVDVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGL HDPRVAYWEPAKWVSKLREHKTDCNEILLNMDMESGHFSARDRYKFWKESAVQQAFVCKH LKSTMRLLVRR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/565 Sequence name : 565 Sequence length : 731 VALUES OF COMPUTED PARAMETERS Coef20 : 3.703 CoefTot : -1.023 ChDiff : -22 ZoneTo : 28 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.929 1.453 0.110 0.528 MesoH : -0.098 0.652 -0.203 0.295 MuHd_075 : 25.439 15.296 6.333 5.503 MuHd_095 : 20.277 13.082 4.177 3.576 MuHd_100 : 20.565 9.202 4.374 3.220 MuHd_105 : 29.166 10.513 7.707 5.243 Hmax_075 : 8.800 14.700 3.141 4.520 Hmax_095 : 5.513 11.900 -1.117 2.494 Hmax_100 : 8.200 9.100 0.537 2.790 Hmax_105 : 6.417 9.100 0.114 3.103 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7744 0.2256 DFMC : 0.6832 0.3168
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 731 LmxM.09.0770 MSSGNSIAASVQPPIAAKKPHRVTFGYVEGEDRGPNPMNPPRHHEDPYFWMRDDDRKDPAVIEHLKKEKAYFEACSSDMT 80 QLRDDIYTEHISHIKEDDMSAPYLYGQYRYYTREVKGKSYKIYCRVPKDKEPGDVAVEEVVIDVNKVAEGKPFCDVMEVE 160 PAPPEHDLVAFSVDMSGNEVYAIEFKHMSDPCRTVADTVSGTNGEIVWGPDHTSFFYVTKDETLRENKVWRHVMGRPQSE 240 DVCLYEENNPLFRAFMYKAADTNTLCIGSQSSETTEVHLLDLRQGNAHNTVEVVRPREKGVRYDVQMHGTRHLLILTNKD 320 GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMENIAVRSNYLVVTGRRGGLTRIWTMMVDPQDGVFKPGAELREVMMEEPI 400 FTVHLVESQMLEYEESTFRMEYSSLATPNTWFNVSPQDHSRTVVKVREVGGGFDAANYKVERRFATAPDQTKIPLSLVYH 480 KDLDMTQPQPCMLYGYGSYGISMDPQFTIQHLPYCDRGMIYVIAHIRGGSEMGRAWYEIGAKYLTKRNTFSDFIAAAEFL 560 VDAKLTTPSQLACEGRSAGGLLVGAVLNMRPDLFKVALAGVPFVDVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSY 640 SPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLREHKTDCNEILLNMDMESGHFSARDRYKFWKESAVQQAFVCKH 720 LKSTMRLLVRR 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ........... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.09.0770 18 QPPIAAK|KP 0.067 . LmxM.09.0770 19 PPIAAKK|PH 0.091 . LmxM.09.0770 22 AAKKPHR|VT 0.111 . LmxM.09.0770 33 YVEGEDR|GP 0.074 . LmxM.09.0770 42 NPMNPPR|HH 0.126 . LmxM.09.0770 52 DPYFWMR|DD 0.133 . LmxM.09.0770 56 WMRDDDR|KD 0.091 . LmxM.09.0770 57 MRDDDRK|DP 0.111 . LmxM.09.0770 66 AVIEHLK|KE 0.058 . LmxM.09.0770 67 VIEHLKK|EK 0.090 . LmxM.09.0770 69 EHLKKEK|AY 0.066 . LmxM.09.0770 83 SDMTQLR|DD 0.138 . LmxM.09.0770 95 EHISHIK|ED 0.062 . LmxM.09.0770 109 YLYGQYR|YY 0.113 . LmxM.09.0770 113 QYRYYTR|EV 0.096 . LmxM.09.0770 116 YYTREVK|GK 0.110 . LmxM.09.0770 118 TREVKGK|SY 0.118 . LmxM.09.0770 121 VKGKSYK|IY 0.075 . LmxM.09.0770 125 SYKIYCR|VP 0.089 . LmxM.09.0770 128 IYCRVPK|DK 0.262 . LmxM.09.0770 130 CRVPKDK|EP 0.087 . LmxM.09.0770 146 VVIDVNK|VA 0.068 . LmxM.09.0770 151 NKVAEGK|PF 0.072 . LmxM.09.0770 186 VYAIEFK|HM 0.065 . LmxM.09.0770 193 HMSDPCR|TV 0.163 . LmxM.09.0770 220 SFFYVTK|DE 0.069 . LmxM.09.0770 225 TKDETLR|EN 0.081 . LmxM.09.0770 228 ETLRENK|VW 0.102 . LmxM.09.0770 231 RENKVWR|HV 0.212 . LmxM.09.0770 236 WRHVMGR|PQ 0.112 . LmxM.09.0770 253 ENNPLFR|AF 0.093 . LmxM.09.0770 258 FRAFMYK|AA 0.108 . LmxM.09.0770 283 VHLLDLR|QG 0.067 . LmxM.09.0770 295 NTVEVVR|PR 0.094 . LmxM.09.0770 297 VEVVRPR|EK 0.093 . LmxM.09.0770 299 VVRPREK|GV 0.076 . LmxM.09.0770 302 PREKGVR|YD 0.101 . LmxM.09.0770 311 VQMHGTR|HL 0.074 . LmxM.09.0770 319 LLILTNK|DG 0.063 . LmxM.09.0770 326 DGAVNHK|LL 0.070 . LmxM.09.0770 332 KLLIAPR|GQ 0.076 . LmxM.09.0770 357 MENIAVR|SN 0.142 . LmxM.09.0770 366 YLVVTGR|RG 0.080 . LmxM.09.0770 367 LVVTGRR|GG 0.101 . LmxM.09.0770 372 RRGGLTR|IW 0.108 . LmxM.09.0770 386 PQDGVFK|PG 0.061 . LmxM.09.0770 392 KPGAELR|EV 0.215 . LmxM.09.0770 419 YEESTFR|ME 0.080 . LmxM.09.0770 441 SPQDHSR|TV 0.184 . LmxM.09.0770 445 HSRTVVK|VR 0.074 . LmxM.09.0770 447 RTVVKVR|EV 0.274 . LmxM.09.0770 459 FDAANYK|VE 0.057 . LmxM.09.0770 462 ANYKVER|RF 0.098 . LmxM.09.0770 463 NYKVERR|FA 0.212 . LmxM.09.0770 472 TAPDQTK|IP 0.057 . LmxM.09.0770 481 LSLVYHK|DL 0.084 . LmxM.09.0770 517 HLPYCDR|GM 0.093 . LmxM.09.0770 527 YVIAHIR|GG 0.102 . LmxM.09.0770 534 GGSEMGR|AW 0.126 . LmxM.09.0770 542 WYEIGAK|YL 0.063 . LmxM.09.0770 546 GAKYLTK|RN 0.061 . LmxM.09.0770 547 AKYLTKR|NT 0.164 . LmxM.09.0770 564 EFLVDAK|LT 0.063 . LmxM.09.0770 576 QLACEGR|SA 0.308 . LmxM.09.0770 590 GAVLNMR|PD 0.066 . LmxM.09.0770 595 MRPDLFK|VA 0.074 . LmxM.09.0770 632 GNPNEYK|YY 0.087 . LmxM.09.0770 647 SPMDNVR|AQ 0.099 . LmxM.09.0770 664 CGLHDPR|VA 0.084 . LmxM.09.0770 672 AYWEPAK|WV 0.090 . LmxM.09.0770 676 PAKWVSK|LR 0.063 . LmxM.09.0770 678 KWVSKLR|EH 0.079 . LmxM.09.0770 681 SKLREHK|TD 0.106 . LmxM.09.0770 701 SGHFSAR|DR 0.132 . LmxM.09.0770 703 HFSARDR|YK 0.154 . LmxM.09.0770 705 SARDRYK|FW 0.092 . LmxM.09.0770 708 DRYKFWK|ES 0.082 . LmxM.09.0770 719 QQAFVCK|HL 0.072 . LmxM.09.0770 722 FVCKHLK|ST 0.079 . LmxM.09.0770 726 HLKSTMR|LL 0.081 . LmxM.09.0770 730 TMRLLVR|R- 0.086 . LmxM.09.0770 731 MRLLVRR|-- 0.164 . ____________________________^_________________

  • Fasta :-

    >LmxM.09.0770 ATGTCGTCGGGCAACTCCATCGCGGCCTCTGTGCAGCCGCCGATCGCCGCCAAGAAGCCG CACCGCGTCACGTTCGGCTACGTGGAGGGTGAGGACCGCGGCCCGAACCCGATGAACCCG CCGCGCCATCACGAGGACCCATACTTTTGGATGCGGGACGACGATCGCAAGGATCCGGCC GTGATTGAGCACCTCAAAAAAGAGAAGGCCTACTTCGAGGCGTGCAGCTCCGACATGACG CAGCTGCGCGACGACATCTACACGGAGCACATTTCGCACATCAAGGAAGATGACATGTCT GCGCCGTACCTGTACGGCCAGTACCGGTACTACACCCGCGAGGTGAAGGGTAAGTCGTAC AAGATTTACTGCCGCGTGCCCAAGGACAAGGAGCCGGGTGACGTCGCGGTCGAGGAGGTC GTCATCGATGTCAACAAGGTCGCCGAGGGCAAACCGTTCTGTGACGTGATGGAGGTGGAG CCGGCACCGCCGGAGCACGACCTCGTGGCCTTCTCTGTGGACATGAGCGGTAACGAGGTG TACGCGATCGAATTTAAGCATATGTCGGACCCGTGCCGGACTGTAGCCGACACGGTGAGC GGCACTAATGGCGAGATTGTGTGGGGCCCGGACCACACCTCCTTTTTCTACGTGACGAAG GACGAAACGCTGCGCGAAAACAAAGTGTGGCGCCACGTGATGGGGAGGCCGCAGTCCGAG GACGTCTGCCTCTACGAGGAGAACAACCCGCTGTTCAGGGCCTTCATGTACAAGGCCGCC GACACAAACACGCTTTGCATCGGCTCGCAGTCGTCGGAGACGACAGAGGTGCACCTGCTT GATCTGCGCCAGGGCAACGCGCACAATACCGTTGAAGTTGTGCGGCCGCGCGAGAAGGGT GTGCGCTACGACGTGCAGATGCACGGCACCCGCCATCTTCTGATCCTCACCAACAAAGAC GGGGCGGTGAACCACAAGCTTCTCATAGCGCCGCGCGGTCAGCCGAGCGACTGGTCACAT GTGCTGGTGGATCACAGCGAGGACGTGTTTATGGAGAACATCGCGGTGCGCTCGAACTAC CTCGTCGTGACAGGCCGCCGCGGCGGGTTGACGCGCATCTGGACGATGATGGTGGACCCG CAGGATGGTGTCTTCAAGCCTGGTGCCGAGCTGCGCGAGGTGATGATGGAGGAGCCGATC TTCACGGTGCACCTCGTGGAGTCCCAGATGTTGGAGTACGAAGAGTCGACATTCCGCATG GAGTACTCGTCCCTTGCCACGCCGAACACGTGGTTCAACGTCAGCCCGCAGGACCACTCT CGCACCGTTGTAAAAGTGCGCGAGGTCGGCGGTGGCTTCGACGCCGCCAACTACAAGGTG GAGCGCCGCTTCGCTACCGCACCGGACCAGACCAAGATCCCGCTTTCACTTGTCTACCAC AAAGACCTCGACATGACCCAGCCGCAGCCGTGCATGCTGTACGGGTACGGCAGCTACGGC ATCAGCATGGACCCTCAGTTCACCATTCAGCATCTGCCGTACTGTGACCGCGGCATGATC TACGTCATAGCCCACATCCGCGGCGGCAGTGAGATGGGCCGTGCATGGTACGAGATCGGC GCCAAGTACCTCACGAAGCGCAACACCTTTTCGGACTTCATCGCGGCAGCCGAGTTCCTG GTGGATGCGAAATTGACGACACCGTCGCAGCTGGCCTGCGAGGGGCGTAGCGCCGGCGGC CTGCTGGTGGGCGCGGTGCTGAACATGCGTCCTGATCTCTTCAAGGTGGCGCTCGCCGGC GTGCCGTTCGTGGATGTCATGACGACCATGTGCGACCCCAGCATTCCCTTGACGACGGGC GAGTGGGAGGAGTGGGGCAACCCGAACGAGTACAAGTACTACGACTACATGCTGAGCTAC AGCCCCATGGACAACGTCCGCGCGCAGGAGTACCCGAATATCATGGTCCAGTGCGGCCTG CACGACCCCCGCGTCGCCTATTGGGAACCGGCCAAGTGGGTGAGCAAGCTGCGTGAGCAC AAGACAGACTGCAACGAAATTCTGCTGAACATGGACATGGAGAGCGGACACTTCTCCGCC AGGGATCGCTACAAGTTCTGGAAGGAGTCGGCTGTCCAGCAAGCGTTCGTGTGCAAGCAC CTGAAGAGCACCATGCGCCTGCTGGTTCGCAGGTAA
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  • Fasta :-

    MSSGNSIAASVQPPIAAKKPHRVTFGYVEGEDRGPNPMNPPRHHEDPYFWMRDDDRKDPA VIEHLKKEKAYFEACSSDMTQLRDDIYTEHISHIKEDDMSAPYLYGQYRYYTREVKGKSY KIYCRVPKDKEPGDVAVEEVVIDVNKVAEGKPFCDVMEVEPAPPEHDLVAFSVDMSGNEV YAIEFKHMSDPCRTVADTVSGTNGEIVWGPDHTSFFYVTKDETLRENKVWRHVMGRPQSE DVCLYEENNPLFRAFMYKAADTNTLCIGSQSSETTEVHLLDLRQGNAHNTVEVVRPREKG VRYDVQMHGTRHLLILTNKDGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMENIAVRSNY LVVTGRRGGLTRIWTMMVDPQDGVFKPGAELREVMMEEPIFTVHLVESQMLEYEESTFRM EYSSLATPNTWFNVSPQDHSRTVVKVREVGGGFDAANYKVERRFATAPDQTKIPLSLVYH KDLDMTQPQPCMLYGYGSYGISMDPQFTIQHLPYCDRGMIYVIAHIRGGSEMGRAWYEIG AKYLTKRNTFSDFIAAAEFLVDAKLTTPSQLACEGRSAGGLLVGAVLNMRPDLFKVALAG VPFVDVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGL HDPRVAYWEPAKWVSKLREHKTDCNEILLNMDMESGHFSARDRYKFWKESAVQQAFVCKH LKSTMRLLVRR

    No Results
No Results
No Results
IDSitePeptideScoreMethod
LmxM.09.0770641 SMLSYSPMDN0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India