LmxM.10.0390 | GP63, leishmanolysin

_IDPredictionOTHERSPmTPCS_Position
LmxM.10.0390OTHER0.9229790.0318210.045201
No Results

  • Fasta :-

    >LmxM.10.0390 MSVDSSSTHRNRCVAARLVRLAAAGAAVTVAVGTAAAWAHAAAPQHRCIHDAMQARVRQS VAAQRMAPSAVSAVGLPHVTLDAADTAAGADPSTGTPRNVVRAANWGALRIAVSAEDLTD PAYHCARVGQRVNNRVGDIVTCTAEDILTDEKRGILVKHLVPQALQLHRERLKVRQVQGK WKVTGMAADVCSYFKVPPAHVTGGVSNTDFVLYVASVPSEESVLAWATTCQVFPDGHPAV GVINIPAANIAARYDQLVTRVVTHEMAHALGFSGTFFDAVGILRDVPNVRGKPYFALMIN SSTAVAKAREQYGCNSLEYLEMEDQGDAGSAGSHIKMRNAQDELMAASASAGYYTALTMA VFQDLGFYQADFSKAEAMPWGRNAGCAFLSEKCMENGITKWPAMFCNESADAIRCPTSRL SVGMCDVTRYQALPPYLQYFTDPFLAGSSAFMDYCPAVVPFADGNCGQSASEADAAFKAF NVFSDAARCIDGAFRPKTTHGLIKSYAALCANVKCDTATRTYSVQVRGSSGYANCTPGLR FELSTVSDAFEKGGYVTCPPYVEVCQGNPQAIKDGGNAAAGRRGPRAAATALVVAALLAV AL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/600 Sequence name : 600 Sequence length : 602 VALUES OF COMPUTED PARAMETERS Coef20 : 5.080 CoefTot : 1.520 ChDiff : 2 ZoneTo : 81 KR : 8 DE : 2 CleavSite : 67 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.729 2.176 0.314 0.638 MesoH : 0.141 0.598 -0.188 0.339 MuHd_075 : 32.907 24.746 10.873 6.645 MuHd_095 : 34.143 19.707 9.810 6.632 MuHd_100 : 31.742 18.420 8.647 6.757 MuHd_105 : 30.907 20.727 8.901 7.375 Hmax_075 : 13.417 21.117 4.025 6.580 Hmax_095 : 6.300 11.300 1.033 2.765 Hmax_100 : 9.100 8.000 0.889 3.580 Hmax_105 : 9.683 10.033 -0.328 4.500 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5755 0.4245 DFMC : 0.1631 0.8369 This protein is probably imported in mitochondria. f(Ser) = 0.0864 f(Arg) = 0.0988 CMi = 0.41494 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 602 LmxM.10.0390 MSVDSSSTHRNRCVAARLVRLAAAGAAVTVAVGTAAAWAHAAAPQHRCIHDAMQARVRQSVAAQRMAPSAVSAVGLPHVT 80 LDAADTAAGADPSTGTPRNVVRAANWGALRIAVSAEDLTDPAYHCARVGQRVNNRVGDIVTCTAEDILTDEKRGILVKHL 160 VPQALQLHRERLKVRQVQGKWKVTGMAADVCSYFKVPPAHVTGGVSNTDFVLYVASVPSEESVLAWATTCQVFPDGHPAV 240 GVINIPAANIAARYDQLVTRVVTHEMAHALGFSGTFFDAVGILRDVPNVRGKPYFALMINSSTAVAKAREQYGCNSLEYL 320 EMEDQGDAGSAGSHIKMRNAQDELMAASASAGYYTALTMAVFQDLGFYQADFSKAEAMPWGRNAGCAFLSEKCMENGITK 400 WPAMFCNESADAIRCPTSRLSVGMCDVTRYQALPPYLQYFTDPFLAGSSAFMDYCPAVVPFADGNCGQSASEADAAFKAF 480 NVFSDAARCIDGAFRPKTTHGLIKSYAALCANVKCDTATRTYSVQVRGSSGYANCTPGLRFELSTVSDAFEKGGYVTCPP 560 YVEVCQGNPQAIKDGGNAAAGRRGPRAAATALVVAALLAVAL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .......................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.10.0390 10 DSSSTHR|NR 0.089 . LmxM.10.0390 12 SSTHRNR|CV 0.137 . LmxM.10.0390 17 NRCVAAR|LV 0.142 . LmxM.10.0390 20 VAARLVR|LA 0.267 . LmxM.10.0390 47 AAAPQHR|CI 0.166 . LmxM.10.0390 56 HDAMQAR|VR 0.099 . LmxM.10.0390 58 AMQARVR|QS 0.109 . LmxM.10.0390 65 QSVAAQR|MA 0.102 . LmxM.10.0390 98 PSTGTPR|NV 0.115 . LmxM.10.0390 102 TPRNVVR|AA 0.169 . LmxM.10.0390 110 ANWGALR|IA 0.088 . LmxM.10.0390 127 PAYHCAR|VG 0.083 . LmxM.10.0390 131 CARVGQR|VN 0.092 . LmxM.10.0390 135 GQRVNNR|VG 0.100 . LmxM.10.0390 152 DILTDEK|RG 0.052 . LmxM.10.0390 153 ILTDEKR|GI 0.170 . LmxM.10.0390 158 KRGILVK|HL 0.074 . LmxM.10.0390 169 QALQLHR|ER 0.074 . LmxM.10.0390 171 LQLHRER|LK 0.075 . LmxM.10.0390 173 LHRERLK|VR 0.063 . LmxM.10.0390 175 RERLKVR|QV 0.155 . LmxM.10.0390 180 VRQVQGK|WK 0.087 . LmxM.10.0390 182 QVQGKWK|VT 0.080 . LmxM.10.0390 195 DVCSYFK|VP 0.055 . LmxM.10.0390 253 AANIAAR|YD 0.111 . LmxM.10.0390 260 YDQLVTR|VV 0.129 . LmxM.10.0390 284 DAVGILR|DV 0.111 . LmxM.10.0390 290 RDVPNVR|GK 0.078 . LmxM.10.0390 292 VPNVRGK|PY 0.079 . LmxM.10.0390 307 SSTAVAK|AR 0.088 . LmxM.10.0390 309 TAVAKAR|EQ 0.112 . LmxM.10.0390 336 SAGSHIK|MR 0.072 . LmxM.10.0390 338 GSHIKMR|NA 0.215 . LmxM.10.0390 374 YQADFSK|AE 0.056 . LmxM.10.0390 382 EAMPWGR|NA 0.133 . LmxM.10.0390 392 CAFLSEK|CM 0.067 . LmxM.10.0390 400 MENGITK|WP 0.059 . LmxM.10.0390 414 ESADAIR|CP 0.079 . LmxM.10.0390 419 IRCPTSR|LS 0.085 . LmxM.10.0390 429 GMCDVTR|YQ 0.073 . LmxM.10.0390 478 EADAAFK|AF 0.059 . LmxM.10.0390 488 VFSDAAR|CI 0.159 . LmxM.10.0390 495 CIDGAFR|PK 0.078 . LmxM.10.0390 497 DGAFRPK|TT 0.073 . LmxM.10.0390 504 TTHGLIK|SY 0.096 . LmxM.10.0390 514 ALCANVK|CD 0.059 . LmxM.10.0390 520 KCDTATR|TY 0.090 . LmxM.10.0390 527 TYSVQVR|GS 0.158 . LmxM.10.0390 540 NCTPGLR|FE 0.061 . LmxM.10.0390 552 VSDAFEK|GG 0.058 . LmxM.10.0390 573 GNPQAIK|DG 0.075 . LmxM.10.0390 582 GNAAAGR|RG 0.083 . LmxM.10.0390 583 NAAAGRR|GP 0.146 . LmxM.10.0390 586 AGRRGPR|AA 0.358 . ____________________________^_________________

  • Fasta :-

    >LmxM.10.0390 ATGTCCGTCGACAGCAGCAGCACGCACCGGAACCGCTGCGTCGCCGCGCGCCTGGTGCGC CTCGCGGCTGCCGGCGCCGCAGTCACCGTCGCTGTCGGCACCGCGGCCGCGTGGGCACAC GCCGCTGCGCCCCAGCACCGCTGCATCCACGACGCGATGCAGGCCCGCGTGCGGCAGTCG GTGGCGGCTCAGCGCATGGCCCCCAGCGCGGTGTCCGCGGTGGGCCTGCCGCACGTGACT CTCGACGCCGCGGACACCGCTGCCGGCGCCGATCCCAGCACGGGCACCCCGCGCAACGTT GTGCGCGCCGCGAACTGGGGCGCGCTGCGCATCGCCGTCTCCGCCGAAGACCTCACCGAC CCCGCCTACCACTGCGCTCGTGTCGGGCAGCGCGTCAACAACCGCGTTGGCGACATTGTC ACCTGCACCGCCGAGGATATCCTCACCGACGAGAAGCGCGGCATCCTCGTCAAGCACCTC GTCCCGCAGGCGCTGCAGCTGCACAGGGAGCGGCTGAAGGTGCGGCAGGTGCAGGGCAAG TGGAAGGTGACGGGCATGGCGGCCGACGTGTGCAGCTACTTCAAGGTGCCGCCGGCGCAC GTCACCGGAGGCGTGAGCAACACCGACTTCGTGTTGTACGTCGCCTCTGTGCCGAGCGAG GAGAGTGTGCTGGCGTGGGCCACGACCTGCCAGGTGTTCCCTGACGGCCACCCAGCCGTC GGCGTCATCAACATCCCCGCGGCGAACATTGCGGCGCGGTACGACCAGCTCGTCACGCGT GTCGTCACGCACGAGATGGCGCACGCGCTGGGCTTCAGCGGCACATTCTTTGACGCCGTC GGCATCCTGCGCGACGTGCCGAACGTACGTGGAAAGCCGTATTTCGCACTCATGATCAAC AGCAGCACGGCGGTGGCGAAGGCGCGTGAGCAGTACGGCTGCAACAGCTTGGAGTATCTG GAGATGGAGGACCAGGGCGATGCGGGCTCCGCCGGGTCGCATATCAAGATGCGCAACGCG CAGGACGAGCTCATGGCGGCTTCCGCATCTGCCGGGTACTACACCGCCCTGACCATGGCC GTCTTCCAGGACCTCGGCTTCTACCAGGCGGACTTCAGCAAGGCCGAGGCGATGCCGTGG GGCCGGAACGCCGGCTGCGCCTTCCTCAGCGAGAAGTGCATGGAGAACGGCATCACGAAG TGGCCGGCGATGTTCTGCAATGAGAGTGCGGACGCCATACGGTGCCCCACCAGTCGCCTC AGCGTCGGAATGTGCGATGTTACCCGCTACCAAGCGCTTCCGCCGTACTTGCAGTACTTC ACGGACCCGTTCCTGGCCGGCAGCTCCGCCTTCATGGACTACTGCCCTGCGGTGGTGCCC TTCGCTGATGGCAACTGCGGGCAGAGTGCCTCTGAAGCCGACGCAGCCTTTAAGGCCTTC AACGTCTTCTCCGACGCGGCGCGCTGCATCGACGGCGCCTTCAGACCGAAGACGACTCAC GGTCTAATCAAGTCGTACGCCGCCCTGTGCGCCAACGTGAAGTGCGACACGGCCACGCGC ACGTACAGCGTCCAGGTGCGCGGCAGCAGCGGCTACGCCAACTGCACGCCGGGCCTCAGG TTTGAGCTGAGCACCGTGAGCGACGCCTTCGAGAAGGGCGGCTACGTCACGTGCCCGCCG TACGTGGAGGTGTGCCAGGGCAACCCGCAGGCTATCAAGGACGGCGGCAACGCCGCGGCT GGTCGCCGTGGTCCGCGCGCCGCGGCGACGGCGCTGGTGGTGGCCGCGCTGCTCGCCGTG GCGCTCTAG
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  • Fasta :-

    MSVDSSSTHRNRCVAARLVRLAAAGAAVTVAVGTAAAWAHAAAPQHRCIHDAMQARVRQS VAAQRMAPSAVSAVGLPHVTLDAADTAAGADPSTGTPRNVVRAANWGALRIAVSAEDLTD PAYHCARVGQRVNNRVGDIVTCTAEDILTDEKRGILVKHLVPQALQLHRERLKVRQVQGK WKVTGMAADVCSYFKVPPAHVTGGVSNTDFVLYVASVPSEESVLAWATTCQVFPDGHPAV GVINIPAANIAARYDQLVTRVVTHEMAHALGFSGTFFDAVGILRDVPNVRGKPYFALMIN SSTAVAKAREQYGCNSLEYLEMEDQGDAGSAGSHIKMRNAQDELMAASASAGYYTALTMA VFQDLGFYQADFSKAEAMPWGRNAGCAFLSEKCMENGITKWPAMFCNESADAIRCPTSRL SVGMCDVTRYQALPPYLQYFTDPFLAGSSAFMDYCPAVVPFADGNCGQSASEADAAFKAF NVFSDAARCIDGAFRPKTTHGLIKSYAALCANVKCDTATRTYSVQVRGSSGYANCTPGLR FELSTVSDAFEKGGYVTCPPYVEVCQGNPQAIKDGGNAAAGRRGPRAAATALVVAALLAV AL

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.10.0390114 SRIAVSAEDL0.991unspLmxM.10.0390114 SRIAVSAEDL0.991unspLmxM.10.0390114 SRIAVSAEDL0.991unspLmxM.10.0390421 STSRLSVGMC0.993unspLmxM.10.03907 SVDSSSTHRN0.992unspLmxM.10.039096 TPSTGTPRNV0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India