LmxM.16.1385 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.16.1385OTHER0.9763870.0016540.021959
No Results

  • Fasta :-

    >LmxM.16.1385 MNIYIIYIRSRRELILPSGVMLNSLVDMPVPVTVRPLRVLGGGSSTSKDSKSGHQSPRGM QEGRSPPYTGSTHASPRGTTGKAASVAMPLATDLLTSMESTVTVNSSTTPPPRLTITIFA ELEDDVEAGGLSFSKASHATVNSVTAGGTCLRVEHDPLTLTQTLLSPLRYSSLCQRAKAE APAGSALSSSEKSGKAAMRRKSGFPMPAGGDRSPERICSGSFRTFSPAESTDLAVRTDSS FFSGLPNDISWIHRRVTTYPGSEAADPPPLRISATPVVPIVPHVAEPSSRKRVAEDMQRL YGSPGAAAASTAVSPTKEASHASISATSRDVSWSGGCPGNTTDASQSPRLAAKKDKKLSF FTPSTSKKPTKVEGKTMPSVAAGQRQAREQIIRVGVQRLYQRLNELRLVVYRVRNDGNCQ FRAISHQLLGNEDYHDIIRSQIVSYMRAARARSFDYYFESPAHADVYYNNLAKSGSWGDE LSLRAASDCLYVNIHVLSSEERNCYITYRPSADHAVSAPSFLVDVWKLRERRRAERRLLR AYGPQQQQGDSSGSNTFGGSRQTSLYAGSQGIGSDDEGEMDANAIQIALHRRLQQCEIRC SLPLSATGSYTGGGGGGSSPGAATMPLLQPQSTMREPSQLLKPAAVPVPRLSSGNEDASG NDAANQVAKFRAVGAEVQSLDTATQAVNIFTQRKESANAYNTSDGAVCFPRRRGEDATHP PFTGAASLEFSSSSLPRLQAQHHDLMVSGSTTEEAPVSGGTRRVDTMTSLQAHSQTMRHG DEAGEIMLLASNTQRRRMNPSFQQSFSSMQRENSPTGHADHFNVDNARSSSHALSASVGG SRANSQLLGSLVPRAATTSLRLGTDDDGSLPSGSDAGSSASQGVCCFSFEPRTEPIDIFL SYLYPVHYNSLSVVQKEVPAAGTEPTAEATTTPSTPPLQPSGSVGAR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/7 Sequence name : 7 Sequence length : 947 VALUES OF COMPUTED PARAMETERS Coef20 : 4.391 CoefTot : -1.099 ChDiff : 11 ZoneTo : 48 KR : 6 DE : 2 CleavSite : 48 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.247 1.406 0.172 0.533 MesoH : -0.133 0.261 -0.259 0.195 MuHd_075 : 33.288 26.169 9.449 6.658 MuHd_095 : 42.221 23.644 9.548 8.634 MuHd_100 : 35.330 18.826 8.230 7.742 MuHd_105 : 32.955 15.811 7.745 6.674 Hmax_075 : 20.183 26.600 4.427 7.540 Hmax_095 : 15.750 18.988 3.061 5.836 Hmax_100 : 14.600 16.000 1.922 4.820 Hmax_105 : 12.367 19.300 1.920 4.643 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4585 0.5415 DFMC : 0.5394 0.4606
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 947 LmxM.16.1385 MNIYIIYIRSRRELILPSGVMLNSLVDMPVPVTVRPLRVLGGGSSTSKDSKSGHQSPRGMQEGRSPPYTGSTHASPRGTT 80 GKAASVAMPLATDLLTSMESTVTVNSSTTPPPRLTITIFAELEDDVEAGGLSFSKASHATVNSVTAGGTCLRVEHDPLTL 160 TQTLLSPLRYSSLCQRAKAEAPAGSALSSSEKSGKAAMRRKSGFPMPAGGDRSPERICSGSFRTFSPAESTDLAVRTDSS 240 FFSGLPNDISWIHRRVTTYPGSEAADPPPLRISATPVVPIVPHVAEPSSRKRVAEDMQRLYGSPGAAAASTAVSPTKEAS 320 HASISATSRDVSWSGGCPGNTTDASQSPRLAAKKDKKLSFFTPSTSKKPTKVEGKTMPSVAAGQRQAREQIIRVGVQRLY 400 QRLNELRLVVYRVRNDGNCQFRAISHQLLGNEDYHDIIRSQIVSYMRAARARSFDYYFESPAHADVYYNNLAKSGSWGDE 480 LSLRAASDCLYVNIHVLSSEERNCYITYRPSADHAVSAPSFLVDVWKLRERRRAERRLLRAYGPQQQQGDSSGSNTFGGS 560 RQTSLYAGSQGIGSDDEGEMDANAIQIALHRRLQQCEIRCSLPLSATGSYTGGGGGGSSPGAATMPLLQPQSTMREPSQL 640 LKPAAVPVPRLSSGNEDASGNDAANQVAKFRAVGAEVQSLDTATQAVNIFTQRKESANAYNTSDGAVCFPRRRGEDATHP 720 PFTGAASLEFSSSSLPRLQAQHHDLMVSGSTTEEAPVSGGTRRVDTMTSLQAHSQTMRHGDEAGEIMLLASNTQRRRMNP 800 SFQQSFSSMQRENSPTGHADHFNVDNARSSSHALSASVGGSRANSQLLGSLVPRAATTSLRLGTDDDGSLPSGSDAGSSA 880 SQGVCCFSFEPRTEPIDIFLSYLYPVHYNSLSVVQKEVPAAGTEPTAEATTTPSTPPLQPSGSVGAR 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.16.1385 9 IYIIYIR|SR 0.085 . LmxM.16.1385 11 IIYIRSR|RE 0.072 . LmxM.16.1385 12 IYIRSRR|EL 0.261 . LmxM.16.1385 35 PVPVTVR|PL 0.081 . LmxM.16.1385 38 VTVRPLR|VL 0.293 . LmxM.16.1385 48 GGSSTSK|DS 0.079 . LmxM.16.1385 51 STSKDSK|SG 0.120 . LmxM.16.1385 58 SGHQSPR|GM 0.149 . LmxM.16.1385 64 RGMQEGR|SP 0.123 . LmxM.16.1385 77 STHASPR|GT 0.165 . LmxM.16.1385 82 PRGTTGK|AA 0.103 . LmxM.16.1385 113 STTPPPR|LT 0.101 . LmxM.16.1385 135 GGLSFSK|AS 0.067 . LmxM.16.1385 152 AGGTCLR|VE 0.073 . LmxM.16.1385 169 TLLSPLR|YS 0.092 . LmxM.16.1385 176 YSSLCQR|AK 0.103 . LmxM.16.1385 178 SLCQRAK|AE 0.074 . LmxM.16.1385 192 ALSSSEK|SG 0.090 . LmxM.16.1385 195 SSEKSGK|AA 0.080 . LmxM.16.1385 199 SGKAAMR|RK 0.098 . LmxM.16.1385 200 GKAAMRR|KS 0.174 . LmxM.16.1385 201 KAAMRRK|SG 0.147 . LmxM.16.1385 212 MPAGGDR|SP 0.148 . LmxM.16.1385 216 GDRSPER|IC 0.168 . LmxM.16.1385 223 ICSGSFR|TF 0.188 . LmxM.16.1385 236 STDLAVR|TD 0.076 . LmxM.16.1385 254 DISWIHR|RV 0.147 . LmxM.16.1385 255 ISWIHRR|VT 0.145 . LmxM.16.1385 271 ADPPPLR|IS 0.070 . LmxM.16.1385 290 VAEPSSR|KR 0.083 . LmxM.16.1385 291 AEPSSRK|RV 0.081 . LmxM.16.1385 292 EPSSRKR|VA 0.401 . LmxM.16.1385 299 VAEDMQR|LY 0.077 . LmxM.16.1385 317 TAVSPTK|EA 0.080 . LmxM.16.1385 329 SISATSR|DV 0.323 . LmxM.16.1385 349 DASQSPR|LA 0.127 . LmxM.16.1385 353 SPRLAAK|KD 0.065 . LmxM.16.1385 354 PRLAAKK|DK 0.124 . LmxM.16.1385 356 LAAKKDK|KL 0.082 . LmxM.16.1385 357 AAKKDKK|LS 0.091 . LmxM.16.1385 367 FTPSTSK|KP 0.058 . LmxM.16.1385 368 TPSTSKK|PT 0.223 . LmxM.16.1385 371 TSKKPTK|VE 0.092 . LmxM.16.1385 375 PTKVEGK|TM 0.059 . LmxM.16.1385 385 SVAAGQR|QA 0.115 . LmxM.16.1385 388 AGQRQAR|EQ 0.228 . LmxM.16.1385 393 AREQIIR|VG 0.080 . LmxM.16.1385 398 IRVGVQR|LY 0.087 . LmxM.16.1385 402 VQRLYQR|LN 0.077 . LmxM.16.1385 407 QRLNELR|LV 0.091 . LmxM.16.1385 412 LRLVVYR|VR 0.101 . LmxM.16.1385 414 LVVYRVR|ND 0.085 . LmxM.16.1385 422 DGNCQFR|AI 0.159 . LmxM.16.1385 439 DYHDIIR|SQ 0.100 . LmxM.16.1385 447 QIVSYMR|AA 0.086 . LmxM.16.1385 450 SYMRAAR|AR 0.224 . LmxM.16.1385 452 MRAARAR|SF 0.340 . LmxM.16.1385 473 YYNNLAK|SG 0.092 . LmxM.16.1385 484 GDELSLR|AA 0.132 . LmxM.16.1385 502 VLSSEER|NC 0.082 . LmxM.16.1385 509 NCYITYR|PS 0.092 . LmxM.16.1385 527 FLVDVWK|LR 0.061 . LmxM.16.1385 529 VDVWKLR|ER 0.089 . LmxM.16.1385 531 VWKLRER|RR 0.062 . LmxM.16.1385 532 WKLRERR|RA 0.384 . LmxM.16.1385 533 KLRERRR|AE 0.151 . LmxM.16.1385 536 ERRRAER|RL 0.199 . LmxM.16.1385 537 RRRAERR|LL 0.238 . LmxM.16.1385 540 AERRLLR|AY 0.417 . LmxM.16.1385 561 NTFGGSR|QT 0.079 . LmxM.16.1385 591 IQIALHR|RL 0.086 . LmxM.16.1385 592 QIALHRR|LQ 0.124 . LmxM.16.1385 599 LQQCEIR|CS 0.079 . LmxM.16.1385 635 QPQSTMR|EP 0.106 . LmxM.16.1385 642 EPSQLLK|PA 0.069 . LmxM.16.1385 650 AAVPVPR|LS 0.115 . LmxM.16.1385 669 AANQVAK|FR 0.081 . LmxM.16.1385 671 NQVAKFR|AV 0.226 . LmxM.16.1385 693 VNIFTQR|KE 0.081 . LmxM.16.1385 694 NIFTQRK|ES 0.083 . LmxM.16.1385 711 GAVCFPR|RR 0.094 . LmxM.16.1385 712 AVCFPRR|RG 0.130 . LmxM.16.1385 713 VCFPRRR|GE 0.124 . LmxM.16.1385 737 SSSSLPR|LQ 0.121 . LmxM.16.1385 762 PVSGGTR|RV 0.123 . LmxM.16.1385 763 VSGGTRR|VD 0.113 . LmxM.16.1385 778 AHSQTMR|HG 0.132 . LmxM.16.1385 795 LASNTQR|RR 0.078 . LmxM.16.1385 796 ASNTQRR|RM 0.190 . LmxM.16.1385 797 SNTQRRR|MN 0.118 . LmxM.16.1385 811 SFSSMQR|EN 0.126 . LmxM.16.1385 828 FNVDNAR|SS 0.183 . LmxM.16.1385 842 ASVGGSR|AN 0.103 . LmxM.16.1385 854 LGSLVPR|AA 0.183 . LmxM.16.1385 861 AATTSLR|LG 0.074 . LmxM.16.1385 892 CFSFEPR|TE 0.083 . LmxM.16.1385 916 SLSVVQK|EV 0.117 . LmxM.16.1385 947 SGSVGAR|-- 0.134 . ____________________________^_________________

  • Fasta :-

    >LmxM.16.1385 ATGAACATATATATAATATATATCAGAAGTCGCCGTGAGCTGATACTGCCAAGCGGCGTC ATGCTCAACTCGCTCGTGGACATGCCGGTGCCAGTGACGGTGCGCCCTCTGCGCGTGCTG GGCGGCGGTAGCTCCACCTCAAAGGACAGCAAGAGCGGGCACCAGTCGCCACGCGGCATG CAAGAGGGACGCTCACCGCCCTACACGGGAAGCACTCACGCAAGCCCAAGGGGCACCACC GGCAAAGCCGCCAGCGTCGCGATGCCGCTCGCCACCGACCTTCTCACTAGCATGGAAAGC ACGGTGACAGTGAACTCGTCAACGACGCCGCCACCACGGCTGACGATCACCATCTTCGCG GAGCTCGAAGATGACGTGGAGGCTGGTGGCCTGAGCTTTAGCAAAGCTAGCCACGCCACC GTGAATAGCGTCACTGCCGGCGGTACCTGTCTCCGCGTCGAGCACGACCCCCTCACCCTT ACCCAGACCCTCTTGTCGCCTCTCCGCTACAGCTCACTGTGTCAGCGTGCGAAAGCCGAG GCACCGGCGGGATCGGCACTCTCATCAAGCGAGAAGTCAGGCAAAGCAGCGATGCGTCGG AAGAGCGGCTTTCCCATGCCGGCCGGTGGAGACCGCAGTCCTGAGAGAATATGTAGCGGC AGTTTCAGAACGTTCAGTCCTGCCGAGTCCACGGATCTTGCCGTACGGACGGACTCGAGT TTCTTCTCAGGGTTGCCGAATGATATATCGTGGATTCACCGCCGGGTGACGACGTACCCA GGGAGTGAGGCTGCGGACCCGCCTCCCTTACGCATCTCCGCGACACCCGTCGTGCCCATC GTTCCGCACGTCGCCGAGCCGTCATCGCGCAAGCGTGTGGCGGAGGATATGCAGCGGCTT TACGGTAGTCCCGGTGCAGCAGCGGCGTCGACCGCGGTGTCCCCTACCAAAGAAGCATCA CATGCGTCCATCTCTGCGACATCAAGGGACGTGTCGTGGTCGGGCGGTTGCCCAGGGAAC ACCACCGACGCCTCTCAGTCGCCGCGGCTGGCGGCTAAGAAAGACAAGAAGCTATCCTTC TTCACCCCTTCCACCTCCAAGAAGCCGACGAAGGTGGAAGGCAAGACGATGCCGTCCGTA GCGGCTGGCCAACGGCAGGCGCGTGAGCAGATCATCCGGGTTGGAGTGCAGCGGCTGTAC CAACGCCTTAACGAGCTGCGCCTCGTTGTCTACCGCGTCCGCAACGATGGCAACTGCCAG TTCCGGGCCATTTCGCACCAACTGTTGGGCAATGAGGACTACCATGACATCATCCGCAGC CAGATCGTCTCCTACATGCGGGCGGCACGAGCGAGAAGCTTCGACTACTACTTCGAGTCA CCTGCGCACGCAGACGTCTACTACAACAACTTGGCCAAGTCAGGATCTTGGGGAGACGAG CTGTCGCTGCGGGCAGCGAGCGACTGCCTCTACGTGAATATCCATGTCTTGTCCTCCGAA GAGCGCAACTGCTACATTACCTATCGCCCCTCCGCCGACCATGCCGTCTCGGCACCGTCG TTTCTCGTCGATGTGTGGAAGCTGCGGGAGCGCCGCCGGGCCGAGCGTCGCCTTCTCCGC GCATACGGGCCGCAACAGCAGCAGGGTGACAGCAGCGGCAGCAACACTTTTGGAGGTTCG CGGCAGACGTCGTTATACGCCGGCTCCCAAGGCATCGGCAGCGATGACGAGGGCGAGATG GACGCAAACGCGATTCAGATCGCCCTGCACCGCCGACTGCAGCAGTGCGAGATCCGCTGC AGTCTGCCGCTCTCAGCGACGGGCAGCTACACTGGCGGTGGTGGTGGTGGCTCCAGTCCC GGGGCGGCGACAATGCCGCTCCTGCAGCCTCAGTCAACGATGAGGGAGCCTAGCCAACTA CTGAAACCGGCAGCAGTGCCGGTTCCTCGCCTCTCCAGCGGCAACGAGGACGCCTCGGGT AACGACGCTGCGAATCAGGTGGCGAAGTTCCGCGCTGTTGGTGCTGAGGTACAGTCGCTC GATACGGCCACGCAGGCCGTCAACATATTTACCCAACGAAAGGAATCGGCCAACGCGTAC AACACGAGTGATGGTGCCGTCTGCTTTCCTCGCAGGCGCGGTGAAGATGCTACGCATCCG CCGTTCACTGGCGCGGCATCGCTTGAGTTCTCAAGCTCATCCTTGCCTCGCCTGCAGGCG CAACACCACGACCTGATGGTGTCTGGCAGCACAACAGAGGAGGCGCCTGTCTCCGGTGGC ACGCGGCGGGTCGACACCATGACCTCCCTCCAGGCCCATTCACAGACGATGCGGCACGGG GACGAGGCTGGCGAGATCATGCTGCTTGCGTCGAACACGCAGCGCCGCCGAATGAATCCG TCGTTCCAGCAGAGCTTCTCTTCCATGCAGAGAGAGAACTCGCCCACCGGCCACGCTGAC CACTTTAACGTCGACAACGCGCGAAGCAGTTCCCACGCACTTTCCGCCAGTGTTGGCGGA AGTCGTGCCAACTCTCAGCTCCTCGGCAGCCTTGTCCCGCGTGCTGCCACAACTTCTCTC CGACTCGGCACCGATGATGACGGCAGTCTGCCGAGTGGCTCGGATGCCGGCAGCAGCGCT AGCCAGGGGGTCTGCTGCTTTTCTTTTGAACCGCGAACAGAGCCGATCGACATCTTCCTG TCGTACCTTTATCCAGTGCACTACAACTCGCTCAGTGTGGTGCAGAAGGAGGTGCCGGCT GCCGGCACCGAGCCCACGGCTGAGGCGACGACAACGCCTTCTACACCGCCGCTACAGCCG AGTGGGAGTGTCGGCGCGCGCTGA
  • Download Fasta

  • Fasta :-

    MNIYIIYIRSRRELILPSGVMLNSLVDMPVPVTVRPLRVLGGGSSTSKDSKSGHQSPRGM QEGRSPPYTGSTHASPRGTTGKAASVAMPLATDLLTSMESTVTVNSSTTPPPRLTITIFA ELEDDVEAGGLSFSKASHATVNSVTAGGTCLRVEHDPLTLTQTLLSPLRYSSLCQRAKAE APAGSALSSSEKSGKAAMRRKSGFPMPAGGDRSPERICSGSFRTFSPAESTDLAVRTDSS FFSGLPNDISWIHRRVTTYPGSEAADPPPLRISATPVVPIVPHVAEPSSRKRVAEDMQRL YGSPGAAAASTAVSPTKEASHASISATSRDVSWSGGCPGNTTDASQSPRLAAKKDKKLSF FTPSTSKKPTKVEGKTMPSVAAGQRQAREQIIRVGVQRLYQRLNELRLVVYRVRNDGNCQ FRAISHQLLGNEDYHDIIRSQIVSYMRAARARSFDYYFESPAHADVYYNNLAKSGSWGDE LSLRAASDCLYVNIHVLSSEERNCYITYRPSADHAVSAPSFLVDVWKLRERRRAERRLLR AYGPQQQQGDSSGSNTFGGSRQTSLYAGSQGIGSDDEGEMDANAIQIALHRRLQQCEIRC SLPLSATGSYTGGGGGGSSPGAATMPLLQPQSTMREPSQLLKPAAVPVPRLSSGNEDASG NDAANQVAKFRAVGAEVQSLDTATQAVNIFTQRKESANAYNTSDGAVCFPRRRGEDATHP PFTGAASLEFSSSSLPRLQAQHHDLMVSGSTTEEAPVSGGTRRVDTMTSLQAHSQTMRHG DEAGEIMLLASNTQRRRMNPSFQQSFSSMQRENSPTGHADHFNVDNARSSSHALSASVGG SRANSQLLGSLVPRAATTSLRLGTDDDGSLPSGSDAGSSASQGVCCFSFEPRTEPIDIFL SYLYPVHYNSLSVVQKEVPAAGTEPTAEATTTPSTPPLQPSGSVGAR

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.16.138597 SDLLTSMEST0.995unspLmxM.16.138597 SDLLTSMEST0.995unspLmxM.16.138597 SDLLTSMEST0.995unspLmxM.16.1385190 SALSSSEKSG0.994unspLmxM.16.1385193 SSSEKSGKAA0.995unspLmxM.16.1385202 SMRRKSGFPM0.994unspLmxM.16.1385213 SGGDRSPERI0.995unspLmxM.16.1385226 SFRTFSPAES0.995unspLmxM.16.1385332 SSRDVSWSGG0.997unspLmxM.16.1385366 STPSTSKKPT0.996unspLmxM.16.1385499 SHVLSSEERN0.994unspLmxM.16.1385564 SSRQTSLYAG0.993unspLmxM.16.1385652 SVPRLSSGNE0.994unspLmxM.16.1385659 SNEDASGNDA0.993unspLmxM.16.1385814 SQRENSPTGH0.996unspLmxM.16.138552 SKDSKSGHQS0.991unspLmxM.16.138575 SSTHASPRGT0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India