LmxM.18.1060 | cysteine peptidase, Clan CA, family C2, putative

_IDPredictionOTHERSPmTPCS_Position
LmxM.18.1060OTHER0.9999680.0000210.000012
No Results

  • Fasta :-

    >LmxM.18.1060 MTVTREQSYISVCRELNDLPLRQVQEALKYGDARLDVSGIYLPRKHFRCVLQFIEERPDI EELILDGVNIGVEEVKLLKESLLRSCVSKLSLQRIKLDSASAKIIRQLCIENSNLVSVVL RETCIPSYLVDEIMLIVDLNRLNAESSSSTSTAEAQQKASGVGRWILFRGRKDRDFCGTV KLSTSVTRKVVDGFVTSYDSVFSDISFQQDAFNHPVAGTEAIRLNRYSALHSFQEAKLGN SKAPFSPSPYYNNQNLCAALNVLTFYNALCKSLVVKRYDKAGLYVFRLFAGGSPVEVYVD DLVPCIHVDATCTIVGLNSCSSPFYAAVLEKAVAKAIGGYRYIQELSLRDCIELLTGCTA FEVNLLRRSSFSTTFDTLRALSEYGHKLVACAIPRTSIEEQTFEESGVWCGIPYAILKTD VCRKKGIHYVFLIQVAAPSNGRALKYAFEYEMYKTEEVNGNCVLWVTFEDFAATFERLFL LLWPFDDAVSDHKNTVEFQVASESLSASSQFAKNPSFLLQNEGKNSSPVMVSLSTFSASD VAIGAKCLFYKAANTENGASLRRYNVCENNALFDSEVFEGNEGSFFFNLLPTERLQMTLS SRVPSSFRIGISSVENVTAIQLPDIMTSSTLSAKWNTFFKAKRFSDDIFQLNRISGGITV SLVLALSQTTGNSPPFPLGVLGWKGTSIDIVDAANPHFSTQQERSTVCVHSFLLTLGAGE SVFILPYCCGNRCPDDYDLTVFCKESFTQSRVKTASVLRCTKT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/343 Sequence name : 343 Sequence length : 763 VALUES OF COMPUTED PARAMETERS Coef20 : 4.056 CoefTot : 0.135 ChDiff : -4 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.453 1.512 0.313 0.622 MesoH : 0.233 0.758 -0.139 0.315 MuHd_075 : 23.995 9.494 4.797 4.492 MuHd_095 : 25.283 10.958 6.095 3.337 MuHd_100 : 16.910 10.697 5.256 3.149 MuHd_105 : 18.439 15.858 6.778 5.266 Hmax_075 : 0.900 3.700 -0.756 1.440 Hmax_095 : 3.000 4.462 -0.045 1.690 Hmax_100 : -1.000 5.900 0.068 1.480 Hmax_105 : 2.800 9.500 1.210 3.360 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6118 0.3882 DFMC : 0.7088 0.2912
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 763 LmxM.18.1060 MTVTREQSYISVCRELNDLPLRQVQEALKYGDARLDVSGIYLPRKHFRCVLQFIEERPDIEELILDGVNIGVEEVKLLKE 80 SLLRSCVSKLSLQRIKLDSASAKIIRQLCIENSNLVSVVLRETCIPSYLVDEIMLIVDLNRLNAESSSSTSTAEAQQKAS 160 GVGRWILFRGRKDRDFCGTVKLSTSVTRKVVDGFVTSYDSVFSDISFQQDAFNHPVAGTEAIRLNRYSALHSFQEAKLGN 240 SKAPFSPSPYYNNQNLCAALNVLTFYNALCKSLVVKRYDKAGLYVFRLFAGGSPVEVYVDDLVPCIHVDATCTIVGLNSC 320 SSPFYAAVLEKAVAKAIGGYRYIQELSLRDCIELLTGCTAFEVNLLRRSSFSTTFDTLRALSEYGHKLVACAIPRTSIEE 400 QTFEESGVWCGIPYAILKTDVCRKKGIHYVFLIQVAAPSNGRALKYAFEYEMYKTEEVNGNCVLWVTFEDFAATFERLFL 480 LLWPFDDAVSDHKNTVEFQVASESLSASSQFAKNPSFLLQNEGKNSSPVMVSLSTFSASDVAIGAKCLFYKAANTENGAS 560 LRRYNVCENNALFDSEVFEGNEGSFFFNLLPTERLQMTLSSRVPSSFRIGISSVENVTAIQLPDIMTSSTLSAKWNTFFK 640 AKRFSDDIFQLNRISGGITVSLVLALSQTTGNSPPFPLGVLGWKGTSIDIVDAANPHFSTQQERSTVCVHSFLLTLGAGE 720 SVFILPYCCGNRCPDDYDLTVFCKESFTQSRVKTASVLRCTKT 800 ................................................................................ 80 ................................................................................ 160 .............P.................................................................. 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ........................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmxM.18.1060 5 --MTVTR|EQ 0.085 . LmxM.18.1060 14 SYISVCR|EL 0.091 . LmxM.18.1060 22 LNDLPLR|QV 0.116 . LmxM.18.1060 29 QVQEALK|YG 0.066 . LmxM.18.1060 34 LKYGDAR|LD 0.087 . LmxM.18.1060 44 SGIYLPR|KH 0.085 . LmxM.18.1060 45 GIYLPRK|HF 0.092 . LmxM.18.1060 48 LPRKHFR|CV 0.222 . LmxM.18.1060 57 LQFIEER|PD 0.077 . LmxM.18.1060 76 IGVEEVK|LL 0.062 . LmxM.18.1060 79 EEVKLLK|ES 0.049 . LmxM.18.1060 84 LKESLLR|SC 0.097 . LmxM.18.1060 89 LRSCVSK|LS 0.074 . LmxM.18.1060 94 SKLSLQR|IK 0.075 . LmxM.18.1060 96 LSLQRIK|LD 0.065 . LmxM.18.1060 103 LDSASAK|II 0.090 . LmxM.18.1060 106 ASAKIIR|QL 0.113 . LmxM.18.1060 121 LVSVVLR|ET 0.092 . LmxM.18.1060 141 LIVDLNR|LN 0.072 . LmxM.18.1060 158 TAEAQQK|AS 0.089 . LmxM.18.1060 164 KASGVGR|WI 0.107 . LmxM.18.1060 169 GRWILFR|GR 0.093 . LmxM.18.1060 171 WILFRGR|KD 0.077 . LmxM.18.1060 172 ILFRGRK|DR 0.250 . LmxM.18.1060 174 FRGRKDR|DF 0.534 *ProP* LmxM.18.1060 181 DFCGTVK|LS 0.057 . LmxM.18.1060 188 LSTSVTR|KV 0.164 . LmxM.18.1060 189 STSVTRK|VV 0.178 . LmxM.18.1060 223 AGTEAIR|LN 0.069 . LmxM.18.1060 226 EAIRLNR|YS 0.176 . LmxM.18.1060 237 HSFQEAK|LG 0.063 . LmxM.18.1060 242 AKLGNSK|AP 0.054 . LmxM.18.1060 271 FYNALCK|SL 0.074 . LmxM.18.1060 276 CKSLVVK|RY 0.082 . LmxM.18.1060 277 KSLVVKR|YD 0.273 . LmxM.18.1060 280 VVKRYDK|AG 0.092 . LmxM.18.1060 287 AGLYVFR|LF 0.083 . LmxM.18.1060 331 YAAVLEK|AV 0.100 . LmxM.18.1060 335 LEKAVAK|AI 0.095 . LmxM.18.1060 341 KAIGGYR|YI 0.078 . LmxM.18.1060 349 IQELSLR|DC 0.101 . LmxM.18.1060 367 FEVNLLR|RS 0.073 . LmxM.18.1060 368 EVNLLRR|SS 0.185 . LmxM.18.1060 379 TTFDTLR|AL 0.109 . LmxM.18.1060 387 LSEYGHK|LV 0.069 . LmxM.18.1060 395 VACAIPR|TS 0.084 . LmxM.18.1060 418 IPYAILK|TD 0.056 . LmxM.18.1060 423 LKTDVCR|KK 0.105 . LmxM.18.1060 424 KTDVCRK|KG 0.072 . LmxM.18.1060 425 TDVCRKK|GI 0.158 . LmxM.18.1060 442 AAPSNGR|AL 0.082 . LmxM.18.1060 445 SNGRALK|YA 0.276 . LmxM.18.1060 454 FEYEMYK|TE 0.061 . LmxM.18.1060 477 FAATFER|LF 0.070 . LmxM.18.1060 493 DAVSDHK|NT 0.057 . LmxM.18.1060 513 ASSQFAK|NP 0.079 . LmxM.18.1060 524 LLQNEGK|NS 0.082 . LmxM.18.1060 546 DVAIGAK|CL 0.065 . LmxM.18.1060 551 AKCLFYK|AA 0.087 . LmxM.18.1060 562 ENGASLR|RY 0.092 . LmxM.18.1060 563 NGASLRR|YN 0.116 . LmxM.18.1060 594 NLLPTER|LQ 0.063 . LmxM.18.1060 602 QMTLSSR|VP 0.073 . LmxM.18.1060 608 RVPSSFR|IG 0.075 . LmxM.18.1060 634 SSTLSAK|WN 0.061 . LmxM.18.1060 640 KWNTFFK|AK 0.072 . LmxM.18.1060 642 NTFFKAK|RF 0.083 . LmxM.18.1060 643 TFFKAKR|FS 0.313 . LmxM.18.1060 653 DIFQLNR|IS 0.093 . LmxM.18.1060 684 LGVLGWK|GT 0.068 . LmxM.18.1060 704 FSTQQER|ST 0.128 . LmxM.18.1060 732 PYCCGNR|CP 0.079 . LmxM.18.1060 744 DLTVFCK|ES 0.068 . LmxM.18.1060 751 ESFTQSR|VK 0.086 . LmxM.18.1060 753 FTQSRVK|TA 0.075 . LmxM.18.1060 759 KTASVLR|CT 0.096 . LmxM.18.1060 762 SVLRCTK|T- 0.096 . ____________________________^_________________

  • Fasta :-

    >LmxM.18.1060 ATGACAGTGACACGAGAGCAGTCATATATCTCTGTATGCAGGGAACTAAATGACCTCCCT CTTCGCCAGGTTCAAGAGGCCTTGAAGTATGGCGATGCAAGGCTTGATGTCAGCGGAATT TACTTACCACGGAAGCACTTTCGCTGCGTACTGCAATTTATCGAGGAGCGCCCCGACATC GAAGAGCTAATCTTGGATGGCGTGAACATAGGTGTGGAGGAGGTGAAGCTACTGAAAGAG TCACTGCTGCGCTCTTGCGTGTCAAAGCTGAGTCTGCAGCGGATAAAGCTGGACTCTGCA AGCGCGAAAATTATTCGTCAACTTTGCATTGAAAATTCGAACTTAGTGTCTGTTGTACTG AGAGAGACGTGCATCCCTTCTTATCTAGTCGATGAAATTATGCTGATTGTTGATTTGAAT CGGTTGAACGCGGAATCGTCGAGCTCCACGTCTACTGCGGAGGCGCAACAGAAGGCCTCG GGTGTGGGACGGTGGATTCTTTTCAGGGGAAGAAAGGACCGTGACTTTTGTGGGACTGTG AAGCTATCAACTAGTGTGACGAGAAAAGTTGTCGACGGTTTTGTTACATCATACGACTCT GTTTTTAGTGATATCTCTTTTCAACAAGACGCTTTCAATCATCCTGTTGCAGGGACGGAA GCAATTCGATTGAATAGATACTCTGCATTGCACTCCTTTCAGGAAGCTAAGCTGGGAAAT TCCAAAGCTCCTTTCTCGCCATCGCCTTATTACAACAACCAGAATTTGTGCGCTGCTTTG AATGTTCTCACTTTTTACAACGCCCTTTGCAAGTCGTTGGTTGTAAAACGATACGATAAG GCGGGGCTGTACGTGTTTCGCCTTTTTGCCGGCGGATCACCTGTTGAGGTGTACGTTGAC GATTTAGTTCCATGCATTCACGTAGATGCGACATGCACCATTGTAGGTTTGAATTCGTGC AGTAGCCCGTTTTACGCCGCGGTCCTTGAGAAGGCTGTTGCAAAAGCAATAGGTGGTTAT CGCTACATCCAAGAACTATCGTTACGTGACTGCATCGAGCTCCTTACAGGTTGCACAGCT TTCGAAGTGAATTTATTGAGGCGATCATCGTTTTCTACCACTTTCGACACGCTACGAGCC CTGAGCGAGTATGGACACAAACTGGTCGCGTGCGCCATCCCGCGTACCTCGATTGAGGAA CAAACGTTCGAAGAGAGCGGGGTGTGGTGCGGAATTCCGTACGCCATTTTGAAAACGGAT GTTTGCCGAAAAAAAGGTATTCACTATGTTTTTTTGATTCAGGTGGCTGCCCCGTCGAAT GGAAGGGCCCTGAAGTACGCGTTTGAGTATGAGATGTACAAGACCGAAGAGGTAAATGGG AACTGTGTTTTGTGGGTGACGTTTGAAGACTTTGCTGCTACGTTTGAGCGCCTTTTTCTT CTTCTGTGGCCTTTCGACGACGCTGTATCGGATCATAAAAATACTGTGGAGTTTCAAGTG GCGAGCGAGTCTTTGTCTGCGTCTTCTCAATTCGCTAAGAACCCCAGTTTTTTGCTTCAA AATGAAGGAAAGAACTCAAGCCCGGTTATGGTGTCGTTATCCACTTTTTCCGCATCTGAC GTCGCAATTGGAGCCAAATGTCTTTTTTACAAGGCCGCTAATACTGAGAATGGAGCTTCT CTGCGTCGCTACAATGTATGCGAAAACAATGCATTGTTTGACTCGGAGGTGTTTGAAGGG AATGAGGGGTCTTTTTTTTTCAATCTGCTCCCCACAGAGCGCCTGCAGATGACTCTTTCT TCACGTGTACCAAGCAGCTTTAGGATTGGAATATCATCCGTGGAGAATGTCACCGCGATT CAGCTCCCAGACATTATGACTTCGTCCACTTTGTCTGCAAAGTGGAACACGTTCTTTAAG GCAAAGCGTTTTTCTGACGATATATTTCAGCTTAACAGGATTAGTGGTGGAATCACTGTT AGTCTTGTACTTGCTCTCTCTCAAACCACTGGCAACAGCCCTCCTTTCCCGCTCGGAGTT CTTGGTTGGAAGGGTACTTCTATCGACATTGTCGATGCAGCCAATCCACATTTTTCCACA CAACAGGAAAGGAGCACTGTCTGCGTACATAGCTTCCTGCTTACTCTCGGTGCTGGTGAA AGCGTCTTTATCCTTCCTTATTGCTGTGGAAACCGATGTCCTGATGATTATGATCTTACG GTTTTCTGCAAGGAAAGCTTTACGCAGAGCAGAGTGAAAACGGCCTCTGTGCTACGATGT ACAAAGACCTGA
  • Download Fasta

  • Fasta :-

    MTVTREQSYISVCRELNDLPLRQVQEALKYGDARLDVSGIYLPRKHFRCVLQFIEERPDI EELILDGVNIGVEEVKLLKESLLRSCVSKLSLQRIKLDSASAKIIRQLCIENSNLVSVVL RETCIPSYLVDEIMLIVDLNRLNAESSSSTSTAEAQQKASGVGRWILFRGRKDRDFCGTV KLSTSVTRKVVDGFVTSYDSVFSDISFQQDAFNHPVAGTEAIRLNRYSALHSFQEAKLGN SKAPFSPSPYYNNQNLCAALNVLTFYNALCKSLVVKRYDKAGLYVFRLFAGGSPVEVYVD DLVPCIHVDATCTIVGLNSCSSPFYAAVLEKAVAKAIGGYRYIQELSLRDCIELLTGCTA FEVNLLRRSSFSTTFDTLRALSEYGHKLVACAIPRTSIEEQTFEESGVWCGIPYAILKTD VCRKKGIHYVFLIQVAAPSNGRALKYAFEYEMYKTEEVNGNCVLWVTFEDFAATFERLFL LLWPFDDAVSDHKNTVEFQVASESLSASSQFAKNPSFLLQNEGKNSSPVMVSLSTFSASD VAIGAKCLFYKAANTENGASLRRYNVCENNALFDSEVFEGNEGSFFFNLLPTERLQMTLS SRVPSSFRIGISSVENVTAIQLPDIMTSSTLSAKWNTFFKAKRFSDDIFQLNRISGGITV SLVLALSQTTGNSPPFPLGVLGWKGTSIDIVDAANPHFSTQQERSTVCVHSFLLTLGAGE SVFILPYCCGNRCPDDYDLTVFCKESFTQSRVKTASVLRCTKT

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.18.1060382 SLRALSEYGH0.997unspLmxM.18.1060382 SLRALSEYGH0.997unspLmxM.18.1060382 SLRALSEYGH0.997unspLmxM.18.1060397 SIPRTSIEEQ0.998unspLmxM.18.1060632 SSSTLSAKWN0.995unspLmxM.18.1060151 SSSSTSTAEA0.993unspLmxM.18.1060370 SLRRSSFSTT0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India