LmxM.20.1180 | calpain-like cysteine peptidase

_IDPredictionOTHERSPmTPCS_Position
LmxM.20.1180OTHER0.9995510.0004030.000046
No Results

  • Fasta :-

    >LmxM.20.1180 MSQDQHNDEAHWTEIEEEAPQEGEVPDVPDQAEDCNEGAPGEEQGEDCNEGSPAEEQAED CNEGAPAEELAEDCNEGAPAEELAEDCNEGAPAEEQAEGAADGPDQCQDLEGEEKPELPC EETQQGEQFTEEVVSVEALETQEHGAPAPEEAYEGECAEDFAQEFHCLQYYSGDSEAQVV PQQAFEEEAPQEYPKETDNNYDAPQHAHEVVGPGSAHARSMPAPHAAAAPPSAIVKPRTR HVKSVARWEAVGYDPRDGSDDEFELSTCMAPVYEDEGEEGNEDASVFKHGEPDFKGEIMS CFDEPNLLYRIIDPKTKTWAFYNDSLQYEMHVQFIFGKHSKLQPLENTTLRQNEEGQYVM EVVVYPTETEMFSQGTVNGFTSKLRAVPLTVDYHNARRRITEELVNNETAAIQQVTNSDN AEDVLQACIDSGIPFVDPEFPPCQASLEAGASKPFKPFAWARPQACVPEEMASQVRLFRA SVRPACVDAGDLGDSWVICSVASVSEDPARLMGMFRHPEGKAAAQREHAVGAYRVTFNKN GWWRSVVVDSYLPVSGGKLKYAKSATDPAEIWPAILEKAYAKLHGSYGRICSGDPLHALQ DMTGFSTMRFDESLTDDKASDQLFSDLVHGIAAGYTVICSTPGRGPHDKDQELCEMYAQV GLVTGCAYTILEAKYIESKELRMVKVRNVWGHSVEWSGNWGNDDTKWDANPDIAEECNFQ KAADGMFWMSWKDARKYFNGGGVCFTHQAAYDYRMNCVFTEGVPSAVLEIEVQSPTCFTF VISQDDKRCQVNASEYKPVMISIAEPVEGEMYKVVMNSSANGARPTSDKWTFLQARDVSL IHELDAGKYIVVPRIMPSDDPVEPVPYVLGMICSKEVGNGDVSVKFKRLDAGNRVFENFP KFEPELMEVEQPVQYQKRAPGEAFPMTQMGEELM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/386 Sequence name : 386 Sequence length : 934 VALUES OF COMPUTED PARAMETERS Coef20 : 2.411 CoefTot : -0.043 ChDiff : -100 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.265 1.388 0.207 0.566 MesoH : -0.671 0.169 -0.347 0.160 MuHd_075 : 29.629 15.754 6.116 4.323 MuHd_095 : 3.344 3.873 1.192 1.387 MuHd_100 : 12.685 6.665 3.043 2.313 MuHd_105 : 16.204 6.284 3.660 2.406 Hmax_075 : -2.333 -1.983 -5.621 1.178 Hmax_095 : -14.612 -8.200 -7.600 -0.090 Hmax_100 : -13.400 -8.200 -7.639 -0.090 Hmax_105 : -12.500 -5.800 -6.446 0.180 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9991 0.0009 DFMC : 0.9950 0.0050
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 934 LmxM.20.1180 MSQDQHNDEAHWTEIEEEAPQEGEVPDVPDQAEDCNEGAPGEEQGEDCNEGSPAEEQAEDCNEGAPAEELAEDCNEGAPA 80 EELAEDCNEGAPAEEQAEGAADGPDQCQDLEGEEKPELPCEETQQGEQFTEEVVSVEALETQEHGAPAPEEAYEGECAED 160 FAQEFHCLQYYSGDSEAQVVPQQAFEEEAPQEYPKETDNNYDAPQHAHEVVGPGSAHARSMPAPHAAAAPPSAIVKPRTR 240 HVKSVARWEAVGYDPRDGSDDEFELSTCMAPVYEDEGEEGNEDASVFKHGEPDFKGEIMSCFDEPNLLYRIIDPKTKTWA 320 FYNDSLQYEMHVQFIFGKHSKLQPLENTTLRQNEEGQYVMEVVVYPTETEMFSQGTVNGFTSKLRAVPLTVDYHNARRRI 400 TEELVNNETAAIQQVTNSDNAEDVLQACIDSGIPFVDPEFPPCQASLEAGASKPFKPFAWARPQACVPEEMASQVRLFRA 480 SVRPACVDAGDLGDSWVICSVASVSEDPARLMGMFRHPEGKAAAQREHAVGAYRVTFNKNGWWRSVVVDSYLPVSGGKLK 560 YAKSATDPAEIWPAILEKAYAKLHGSYGRICSGDPLHALQDMTGFSTMRFDESLTDDKASDQLFSDLVHGIAAGYTVICS 640 TPGRGPHDKDQELCEMYAQVGLVTGCAYTILEAKYIESKELRMVKVRNVWGHSVEWSGNWGNDDTKWDANPDIAEECNFQ 720 KAADGMFWMSWKDARKYFNGGGVCFTHQAAYDYRMNCVFTEGVPSAVLEIEVQSPTCFTFVISQDDKRCQVNASEYKPVM 800 ISIAEPVEGEMYKVVMNSSANGARPTSDKWTFLQARDVSLIHELDAGKYIVVPRIMPSDDPVEPVPYVLGMICSKEVGNG 880 DVSVKFKRLDAGNRVFENFPKFEPELMEVEQPVQYQKRAPGEAFPMTQMGEELM 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ...................................................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.20.1180 115 DLEGEEK|PE 0.062 . LmxM.20.1180 195 APQEYPK|ET 0.076 . LmxM.20.1180 219 PGSAHAR|SM 0.169 . LmxM.20.1180 236 PPSAIVK|PR 0.071 . LmxM.20.1180 238 SAIVKPR|TR 0.113 . LmxM.20.1180 240 IVKPRTR|HV 0.122 . LmxM.20.1180 243 PRTRHVK|SV 0.446 . LmxM.20.1180 247 HVKSVAR|WE 0.088 . LmxM.20.1180 256 AVGYDPR|DG 0.114 . LmxM.20.1180 288 EDASVFK|HG 0.075 . LmxM.20.1180 295 HGEPDFK|GE 0.061 . LmxM.20.1180 310 EPNLLYR|II 0.159 . LmxM.20.1180 315 YRIIDPK|TK 0.066 . LmxM.20.1180 317 IIDPKTK|TW 0.062 . LmxM.20.1180 338 VQFIFGK|HS 0.061 . LmxM.20.1180 341 IFGKHSK|LQ 0.060 . LmxM.20.1180 351 LENTTLR|QN 0.123 . LmxM.20.1180 383 VNGFTSK|LR 0.057 . LmxM.20.1180 385 GFTSKLR|AV 0.098 . LmxM.20.1180 397 VDYHNAR|RR 0.086 . LmxM.20.1180 398 DYHNARR|RI 0.130 . LmxM.20.1180 399 YHNARRR|IT 0.193 . LmxM.20.1180 453 LEAGASK|PF 0.061 . LmxM.20.1180 456 GASKPFK|PF 0.098 . LmxM.20.1180 462 KPFAWAR|PQ 0.111 . LmxM.20.1180 476 EMASQVR|LF 0.088 . LmxM.20.1180 479 SQVRLFR|AS 0.161 . LmxM.20.1180 483 LFRASVR|PA 0.101 . LmxM.20.1180 510 VSEDPAR|LM 0.104 . LmxM.20.1180 516 RLMGMFR|HP 0.103 . LmxM.20.1180 521 FRHPEGK|AA 0.106 . LmxM.20.1180 526 GKAAAQR|EH 0.089 . LmxM.20.1180 534 HAVGAYR|VT 0.091 . LmxM.20.1180 539 YRVTFNK|NG 0.058 . LmxM.20.1180 544 NKNGWWR|SV 0.173 . LmxM.20.1180 558 LPVSGGK|LK 0.059 . LmxM.20.1180 560 VSGGKLK|YA 0.075 . LmxM.20.1180 563 GKLKYAK|SA 0.098 . LmxM.20.1180 578 WPAILEK|AY 0.070 . LmxM.20.1180 582 LEKAYAK|LH 0.069 . LmxM.20.1180 589 LHGSYGR|IC 0.095 . LmxM.20.1180 609 TGFSTMR|FD 0.096 . LmxM.20.1180 618 ESLTDDK|AS 0.061 . LmxM.20.1180 644 ICSTPGR|GP 0.120 . LmxM.20.1180 649 GRGPHDK|DQ 0.108 . LmxM.20.1180 674 YTILEAK|YI 0.078 . LmxM.20.1180 679 AKYIESK|EL 0.061 . LmxM.20.1180 682 IESKELR|MV 0.137 . LmxM.20.1180 685 KELRMVK|VR 0.103 . LmxM.20.1180 687 LRMVKVR|NV 0.165 . LmxM.20.1180 706 WGNDDTK|WD 0.060 . LmxM.20.1180 721 EECNFQK|AA 0.087 . LmxM.20.1180 732 MFWMSWK|DA 0.103 . LmxM.20.1180 735 MSWKDAR|KY 0.126 . LmxM.20.1180 736 SWKDARK|YF 0.109 . LmxM.20.1180 754 QAAYDYR|MN 0.103 . LmxM.20.1180 787 VISQDDK|RC 0.058 . LmxM.20.1180 788 ISQDDKR|CQ 0.127 . LmxM.20.1180 797 VNASEYK|PV 0.085 . LmxM.20.1180 813 VEGEMYK|VV 0.070 . LmxM.20.1180 824 SSANGAR|PT 0.144 . LmxM.20.1180 829 ARPTSDK|WT 0.073 . LmxM.20.1180 836 WTFLQAR|DV 0.160 . LmxM.20.1180 848 HELDAGK|YI 0.059 . LmxM.20.1180 854 KYIVVPR|IM 0.083 . LmxM.20.1180 875 LGMICSK|EV 0.088 . LmxM.20.1180 885 NGDVSVK|FK 0.059 . LmxM.20.1180 887 DVSVKFK|RL 0.103 . LmxM.20.1180 888 VSVKFKR|LD 0.161 . LmxM.20.1180 894 RLDAGNR|VF 0.075 . LmxM.20.1180 901 VFENFPK|FE 0.062 . LmxM.20.1180 917 QPVQYQK|RA 0.064 . LmxM.20.1180 918 PVQYQKR|AP 0.321 . ____________________________^_________________

  • Fasta :-

    >LmxM.20.1180 ATGTCTCAAGATCAGCATAACGACGAGGCCCACTGGACCGAGATCGAAGAGGAGGCTCCA CAGGAAGGGGAAGTCCCCGACGTGCCTGACCAGGCTGAGGATTGCAACGAGGGCGCACCG GGAGAGGAGCAGGGTGAGGATTGCAACGAGGGCTCACCGGCAGAGGAGCAGGCTGAGGAT TGCAACGAGGGCGCACCGGCAGAGGAGCTGGCTGAGGATTGCAACGAGGGCGCACCGGCA GAGGAGCTGGCTGAGGATTGCAACGAGGGCGCACCGGCAGAGGAGCAGGCTGAGGGAGCC GCAGATGGACCTGATCAATGTCAAGATCTGGAGGGTGAAGAGAAACCTGAACTGCCATGT GAGGAGACACAACAGGGCGAACAGTTCACAGAGGAGGTCGTCTCGGTCGAGGCTCTCGAG ACCCAGGAGCACGGTGCCCCTGCACCCGAGGAGGCTTACGAGGGAGAGTGTGCCGAGGAC TTTGCTCAGGAGTTCCACTGTCTCCAATATTACTCGGGGGACAGCGAGGCCCAAGTAGTC CCGCAGCAGGCTTTCGAGGAGGAGGCTCCTCAGGAGTACCCGAAAGAGACCGACAATAAC TATGACGCACCGCAGCACGCGCACGAAGTGGTGGGTCCTGGCAGCGCTCACGCCCGCTCG ATGCCTGCGCCGCACGCTGCCGCTGCGCCGCCGAGCGCGATTGTGAAGCCGCGGACGCGC CACGTGAAGAGCGTCGCTCGCTGGGAGGCGGTGGGGTATGACCCGCGTGACGGGAGCGAC GATGAGTTCGAGCTGTCGACGTGCATGGCACCGGTATACGAGGACGAGGGTGAGGAGGGC AACGAGGATGCGAGCGTGTTCAAGCACGGCGAGCCGGATTTCAAGGGGGAGATCATGTCG TGCTTCGACGAGCCGAACCTGCTGTACCGGATCATTGACCCGAAGACGAAGACGTGGGCG TTTTACAACGACAGCCTGCAGTACGAGATGCATGTACAGTTCATATTTGGCAAGCACTCG AAACTGCAGCCGCTGGAGAACACGACGTTGCGGCAGAACGAAGAGGGCCAATACGTGATG GAGGTGGTCGTGTACCCGACGGAGACTGAGATGTTTTCGCAGGGCACTGTGAACGGGTTC ACAAGCAAGCTGCGCGCGGTGCCACTGACGGTGGACTACCATAATGCGCGCCGCAGGATC ACGGAGGAGCTGGTGAACAACGAGACGGCTGCGATCCAGCAGGTGACGAACAGCGACAAC GCGGAGGACGTGCTGCAGGCGTGCATCGACAGCGGGATTCCGTTCGTGGACCCCGAGTTC CCGCCGTGCCAGGCGTCGCTGGAGGCTGGGGCGAGCAAGCCGTTCAAGCCGTTTGCGTGG GCACGCCCCCAGGCGTGCGTGCCGGAGGAGATGGCGTCGCAGGTGCGACTGTTCCGCGCG AGCGTGAGGCCCGCCTGCGTGGACGCTGGCGACCTCGGCGACTCGTGGGTGATTTGCTCT GTTGCGTCGGTGTCGGAGGACCCTGCGCGGCTGATGGGGATGTTCCGCCACCCGGAGGGC AAGGCTGCGGCGCAGCGCGAGCACGCGGTTGGCGCGTACCGCGTGACGTTCAACAAAAAT GGGTGGTGGCGCAGCGTGGTGGTGGACAGCTACCTGCCTGTGTCCGGCGGCAAGCTGAAG TACGCGAAGAGCGCGACGGACCCTGCGGAGATCTGGCCTGCGATCCTAGAGAAGGCGTAC GCGAAGCTGCATGGCAGCTACGGGAGGATCTGCTCCGGCGACCCGCTGCACGCACTCCAG GACATGACCGGGTTCTCGACGATGCGCTTCGACGAGTCGCTGACGGACGACAAGGCGAGC GACCAGCTGTTCAGCGATCTTGTGCACGGGATTGCTGCAGGGTACACGGTGATCTGCAGC ACGCCCGGGCGCGGGCCGCACGACAAGGACCAGGAGCTGTGCGAGATGTACGCGCAGGTG GGGCTTGTGACCGGGTGCGCGTACACGATCCTGGAGGCGAAGTACATCGAGAGCAAGGAG CTGCGGATGGTGAAGGTACGCAACGTGTGGGGGCACAGCGTGGAGTGGAGCGGCAACTGG GGGAACGACGACACGAAATGGGACGCGAACCCGGACATCGCGGAGGAGTGCAACTTCCAG AAGGCGGCGGATGGGATGTTCTGGATGTCGTGGAAGGACGCGCGGAAGTACTTCAACGGT GGTGGCGTGTGCTTCACGCACCAGGCGGCGTACGACTACCGCATGAACTGCGTGTTCACG GAAGGCGTGCCGTCCGCTGTGCTGGAGATCGAGGTGCAGTCGCCTACGTGCTTCACGTTT GTGATTTCGCAGGACGACAAGCGGTGCCAGGTGAACGCGTCGGAGTACAAGCCTGTGATG ATCAGCATTGCGGAGCCCGTGGAGGGCGAGATGTACAAGGTCGTCATGAACTCCTCGGCG AACGGCGCGCGGCCGACGTCGGACAAGTGGACGTTTCTGCAGGCACGCGACGTCTCGCTG ATCCACGAGCTGGACGCTGGGAAGTACATTGTCGTGCCGCGCATCATGCCTTCGGATGAC CCGGTGGAGCCTGTACCGTACGTTCTGGGGATGATCTGCAGCAAGGAGGTCGGGAACGGC GACGTGAGCGTGAAGTTCAAGCGCCTGGACGCTGGCAACCGCGTGTTTGAGAACTTCCCG AAGTTCGAGCCGGAGCTGATGGAGGTGGAGCAGCCGGTCCAGTACCAGAAGCGCGCGCCG GGCGAGGCATTCCCGATGACGCAGATGGGGGAGGAGCTGATGTAG
  • Download Fasta

  • Fasta :-

    MSQDQHNDEAHWTEIEEEAPQEGEVPDVPDQAEDCNEGAPGEEQGEDCNEGSPAEEQAED CNEGAPAEELAEDCNEGAPAEELAEDCNEGAPAEEQAEGAADGPDQCQDLEGEEKPELPC EETQQGEQFTEEVVSVEALETQEHGAPAPEEAYEGECAEDFAQEFHCLQYYSGDSEAQVV PQQAFEEEAPQEYPKETDNNYDAPQHAHEVVGPGSAHARSMPAPHAAAAPPSAIVKPRTR HVKSVARWEAVGYDPRDGSDDEFELSTCMAPVYEDEGEEGNEDASVFKHGEPDFKGEIMS CFDEPNLLYRIIDPKTKTWAFYNDSLQYEMHVQFIFGKHSKLQPLENTTLRQNEEGQYVM EVVVYPTETEMFSQGTVNGFTSKLRAVPLTVDYHNARRRITEELVNNETAAIQQVTNSDN AEDVLQACIDSGIPFVDPEFPPCQASLEAGASKPFKPFAWARPQACVPEEMASQVRLFRA SVRPACVDAGDLGDSWVICSVASVSEDPARLMGMFRHPEGKAAAQREHAVGAYRVTFNKN GWWRSVVVDSYLPVSGGKLKYAKSATDPAEIWPAILEKAYAKLHGSYGRICSGDPLHALQ DMTGFSTMRFDESLTDDKASDQLFSDLVHGIAAGYTVICSTPGRGPHDKDQELCEMYAQV GLVTGCAYTILEAKYIESKELRMVKVRNVWGHSVEWSGNWGNDDTKWDANPDIAEECNFQ KAADGMFWMSWKDARKYFNGGGVCFTHQAAYDYRMNCVFTEGVPSAVLEIEVQSPTCFTF VISQDDKRCQVNASEYKPVMISIAEPVEGEMYKVVMNSSANGARPTSDKWTFLQARDVSL IHELDAGKYIVVPRIMPSDDPVEPVPYVLGMICSKEVGNGDVSVKFKRLDAGNRVFENFP KFEPELMEVEQPVQYQKRAPGEAFPMTQMGEELM

  • title: catalytic site
  • coordinates: S495,C666,N688
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.20.1180481 SLFRASVRPA0.995unspLmxM.20.1180481 SLFRASVRPA0.995unspLmxM.20.1180481 SLFRASVRPA0.995unspLmxM.20.1180503 SCSVASVSED0.993unspLmxM.20.1180613 SRFDESLTDD0.995unspLmxM.20.1180730 SMFWMSWKDA0.997unspLmxM.20.1180827 SARPTSDKWT0.998unspLmxM.20.1180883 SNGDVSVKFK0.992unspLmxM.20.1180135 SEEVVSVEAL0.995unspLmxM.20.1180259 SPRDGSDDEF0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India