LmxM.21.0400 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase, putative

UniProt_ID: E9AV07

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0036459
Computed_GO_Functions: thiol-dependent ubiquitinyl hydrolase activity
Computed_GO_Process_IDs: GO:0016579
Computed_GO_Processes: protein deubiquitination
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs: GO:0004197 GO:0004221
Curated_GO_Functions: cysteine-type endopeptidase activity obsolete ubiquitin thiolesterase activity
Curated_GO_Processes: ubiquitin-dependent protein catabolic process

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	LmxM.21.0400	OTHER	0.999884	0.000114	0.000003

No Results

Fasta :-
>LmxM.21.0400 MDTVGSSVPRYVDAKSMVYTLPCFTPDRSLSSPTSGGAGPRSQPIAIQMSISQQLPMISS SSDFRACAPSSPLSPSRRRFAANLSSTLEIPTYNTTTSTVVEDLSCSSPVLKSYRQHSFS QPRWDACLADSPKSPGMSIHGCASLSAGASEAPVAMSPATSFSSGAGSSSHSTAIHTKFL EITGHPLGLENYGNTCYCNSVIQLIYHCAPLRLRLLELHHVYLTKKGKSGFEEGTVLFHL CSLIGAMHKSNNRTKDKYQREKIVPKDLLNCVRAKNEVFNNDMQQDAHEFTMFLLNDIWD TEQRIMADPANVNLFLKHEASMKKKGSLPFSWKHSKDKHISSHKENKLDKTTSAAATNSD AGTSGGKAVDAQQHFSRELTPLQVILQGQFGSLTACLECENVTARDEVFMDLSLETAQGT SLLRCLDHFGDPEYFWGTNKLRCEECKMPVRAAKTIHVQQLPQYALLIHLKRFQYDVKKQ TFTKKADHVALPMQMDVEEYLTDPEVIEQNLRNKQARSQKNSGVDAGSSTGGHDNSGSGQ KNGANTTSSLDTFKPASEEVRRKLRGVARHKARFELTGFVAHIGEGPNSGHYFTCVRYGP QLWRRFDDETVSTMAERDVKQYFGVPSDAVGVVTTTAYILLYERVA
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/137 Sequence name : 137 Sequence length : 646 VALUES OF COMPUTED PARAMETERS Coef20 : 3.937 CoefTot : 0.000 ChDiff : 6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.288 1.341 0.135 0.522 MesoH : 0.322 0.240 -0.166 0.249 MuHd_075 : 17.280 17.017 5.185 5.398 MuHd_095 : 22.321 14.679 5.407 4.897 MuHd_100 : 21.522 17.975 5.201 5.380 MuHd_105 : 21.773 19.894 5.116 6.027 Hmax_075 : 5.800 14.500 0.634 4.090 Hmax_095 : 12.600 11.700 1.889 4.360 Hmax_100 : 4.300 13.500 -0.362 3.800 Hmax_105 : 13.500 14.200 2.061 4.640 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8132 0.1868 DFMC : 0.9298 0.0702

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 646 LmxM.21.0400 MDTVGSSVPRYVDAKSMVYTLPCFTPDRSLSSPTSGGAGPRSQPIAIQMSISQQLPMISSSSDFRACAPSSPLSPSRRRF 80 AANLSSTLEIPTYNTTTSTVVEDLSCSSPVLKSYRQHSFSQPRWDACLADSPKSPGMSIHGCASLSAGASEAPVAMSPAT 160 SFSSGAGSSSHSTAIHTKFLEITGHPLGLENYGNTCYCNSVIQLIYHCAPLRLRLLELHHVYLTKKGKSGFEEGTVLFHL 240 CSLIGAMHKSNNRTKDKYQREKIVPKDLLNCVRAKNEVFNNDMQQDAHEFTMFLLNDIWDTEQRIMADPANVNLFLKHEA 320 SMKKKGSLPFSWKHSKDKHISSHKENKLDKTTSAAATNSDAGTSGGKAVDAQQHFSRELTPLQVILQGQFGSLTACLECE 400 NVTARDEVFMDLSLETAQGTSLLRCLDHFGDPEYFWGTNKLRCEECKMPVRAAKTIHVQQLPQYALLIHLKRFQYDVKKQ 480 TFTKKADHVALPMQMDVEEYLTDPEVIEQNLRNKQARSQKNSGVDAGSSTGGHDNSGSGQKNGANTTSSLDTFKPASEEV 560 RRKLRGVARHKARFELTGFVAHIGEGPNSGHYFTCVRYGPQLWRRFDDETVSTMAERDVKQYFGVPSDAVGVVTTTAYIL 640 LYERVA 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ...... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.21.0400 10 VGSSVPR|YV 0.227 . LmxM.21.0400 15 PRYVDAK|SM 0.093 . LmxM.21.0400 28 PCFTPDR|SL 0.111 . LmxM.21.0400 41 SGGAGPR|SQ 0.144 . LmxM.21.0400 65 SSSSDFR|AC 0.109 . LmxM.21.0400 77 SPLSPSR|RR 0.089 . LmxM.21.0400 78 PLSPSRR|RF 0.190 . LmxM.21.0400 79 LSPSRRR|FA 0.155 . LmxM.21.0400 112 CSSPVLK|SY 0.103 . LmxM.21.0400 115 PVLKSYR|QH 0.093 . LmxM.21.0400 123 HSFSQPR|WD 0.089 . LmxM.21.0400 133 CLADSPK|SP 0.108 . LmxM.21.0400 178 STAIHTK|FL 0.093 . LmxM.21.0400 212 YHCAPLR|LR 0.073 . LmxM.21.0400 214 CAPLRLR|LL 0.068 . LmxM.21.0400 225 HHVYLTK|KG 0.064 . LmxM.21.0400 226 HVYLTKK|GK 0.124 . LmxM.21.0400 228 YLTKKGK|SG 0.092 . LmxM.21.0400 249 LIGAMHK|SN 0.072 . LmxM.21.0400 253 MHKSNNR|TK 0.090 . LmxM.21.0400 255 KSNNRTK|DK 0.107 . LmxM.21.0400 257 NNRTKDK|YQ 0.075 . LmxM.21.0400 260 TKDKYQR|EK 0.081 . LmxM.21.0400 262 DKYQREK|IV 0.075 . LmxM.21.0400 266 REKIVPK|DL 0.076 . LmxM.21.0400 273 DLLNCVR|AK 0.089 . LmxM.21.0400 275 LNCVRAK|NE 0.064 . LmxM.21.0400 304 IWDTEQR|IM 0.071 . LmxM.21.0400 317 NVNLFLK|HE 0.059 . LmxM.21.0400 323 KHEASMK|KK 0.069 . LmxM.21.0400 324 HEASMKK|KG 0.089 . LmxM.21.0400 325 EASMKKK|GS 0.126 . LmxM.21.0400 333 SLPFSWK|HS 0.068 . LmxM.21.0400 336 FSWKHSK|DK 0.082 . LmxM.21.0400 338 WKHSKDK|HI 0.089 . LmxM.21.0400 344 KHISSHK|EN 0.059 . LmxM.21.0400 347 SSHKENK|LD 0.065 . LmxM.21.0400 350 KENKLDK|TT 0.085 . LmxM.21.0400 367 AGTSGGK|AV 0.083 . LmxM.21.0400 377 AQQHFSR|EL 0.118 . LmxM.21.0400 405 CENVTAR|DE 0.097 . LmxM.21.0400 424 QGTSLLR|CL 0.084 . LmxM.21.0400 440 YFWGTNK|LR 0.055 . LmxM.21.0400 442 WGTNKLR|CE 0.088 . LmxM.21.0400 447 LRCEECK|MP 0.072 . LmxM.21.0400 451 ECKMPVR|AA 0.100 . LmxM.21.0400 454 MPVRAAK|TI 0.255 . LmxM.21.0400 471 ALLIHLK|RF 0.057 . LmxM.21.0400 472 LLIHLKR|FQ 0.235 . LmxM.21.0400 478 RFQYDVK|KQ 0.058 . LmxM.21.0400 479 FQYDVKK|QT 0.114 . LmxM.21.0400 484 KKQTFTK|KA 0.083 . LmxM.21.0400 485 KQTFTKK|AD 0.141 . LmxM.21.0400 512 VIEQNLR|NK 0.061 . LmxM.21.0400 514 EQNLRNK|QA 0.076 . LmxM.21.0400 517 LRNKQAR|SQ 0.305 . LmxM.21.0400 520 KQARSQK|NS 0.169 . LmxM.21.0400 541 NSGSGQK|NG 0.056 . LmxM.21.0400 554 SSLDTFK|PA 0.076 . LmxM.21.0400 561 PASEEVR|RK 0.086 . LmxM.21.0400 562 ASEEVRR|KL 0.159 . LmxM.21.0400 563 SEEVRRK|LR 0.096 . LmxM.21.0400 565 EVRRKLR|GV 0.381 . LmxM.21.0400 569 KLRGVAR|HK 0.121 . LmxM.21.0400 571 RGVARHK|AR 0.059 . LmxM.21.0400 573 VARHKAR|FE 0.159 . LmxM.21.0400 597 HYFTCVR|YG 0.072 . LmxM.21.0400 604 YGPQLWR|RF 0.086 . LmxM.21.0400 605 GPQLWRR|FD 0.238 . LmxM.21.0400 617 VSTMAER|DV 0.172 . LmxM.21.0400 620 MAERDVK|QY 0.135 . LmxM.21.0400 644 YILLYER|VA 0.072 . ____________________________^_________________

Fasta :-
>LmxM.21.0400 ATGGACACCGTCGGCTCGTCAGTGCCGCGCTACGTGGATGCAAAGAGTATGGTGTACACC CTTCCCTGCTTTACCCCGGACAGGTCGCTGAGCAGCCCGACGAGCGGCGGCGCTGGTCCA CGGAGCCAACCGATCGCGATACAGATGTCTATCTCACAGCAGCTGCCGATGATATCCTCC AGCAGTGACTTCCGCGCATGCGCACCATCCTCGCCGCTCTCCCCATCCCGCCGGCGTTTC GCTGCGAATCTGTCGAGCACACTCGAGATCCCGACGTACAACACGACCACCTCCACCGTC GTGGAGGATCTGTCCTGCAGCTCGCCAGTGCTCAAGTCGTACCGGCAGCACTCCTTCTCC CAACCGAGGTGGGATGCGTGTCTGGCCGACTCCCCCAAATCCCCAGGCATGAGCATCCAC GGCTGCGCATCCCTCAGCGCCGGAGCCTCCGAGGCACCGGTGGCGATGAGCCCGGCCACC TCGTTCTCGTCTGGGGCTGGCAGCAGCTCGCACAGCACGGCGATCCACACAAAGTTCCTC GAGATAACCGGGCACCCGCTGGGCTTGGAGAACTACGGCAACACCTGCTACTGCAACTCT GTCATCCAGCTGATCTACCACTGCGCCCCACTGCGGCTGCGGCTGCTCGAGCTGCACCAC GTCTACCTCACCAAGAAGGGCAAGTCCGGCTTCGAGGAGGGCACGGTGCTCTTCCACCTC TGCAGTCTCATCGGCGCTATGCACAAGTCGAACAACCGCACCAAGGACAAGTACCAGCGC GAGAAGATCGTCCCAAAGGACCTGCTAAACTGCGTGCGCGCCAAGAACGAGGTCTTCAAC AACGACATGCAGCAAGACGCGCACGAGTTCACCATGTTTCTGCTGAATGACATCTGGGAC ACGGAGCAGCGCATCATGGCCGACCCCGCCAACGTGAACCTCTTCCTCAAGCACGAGGCG TCCATGAAGAAGAAGGGGTCGTTGCCCTTCTCCTGGAAGCACAGCAAGGATAAGCACATC AGCAGTCACAAGGAAAACAAGCTTGACAAGACAACCTCGGCAGCGGCCACCAACAGCGAC GCCGGCACGAGCGGGGGCAAGGCGGTGGATGCACAGCAGCACTTCAGCAGGGAGCTCACC CCTCTCCAGGTAATCCTGCAAGGCCAGTTTGGCTCCCTCACCGCCTGCCTCGAGTGCGAG AACGTGACCGCCCGAGATGAGGTCTTCATGGACCTCAGCCTCGAGACGGCACAGGGCACG TCCCTGCTCCGCTGTCTCGACCACTTCGGCGACCCCGAGTACTTCTGGGGGACGAACAAG CTGCGCTGCGAGGAGTGCAAGATGCCGGTGCGCGCCGCCAAGACGATCCACGTGCAGCAG CTGCCGCAGTATGCGCTCCTTATCCACCTGAAGCGCTTCCAGTACGACGTGAAGAAGCAG ACCTTCACCAAGAAGGCAGATCACGTCGCACTGCCGATGCAGATGGACGTGGAGGAGTAC CTGACGGACCCAGAGGTGATCGAGCAGAACCTGCGCAACAAGCAGGCGCGCTCGCAGAAG AACAGCGGCGTTGACGCGGGCAGCAGCACCGGCGGGCACGACAACAGCGGCAGCGGACAG AAAAACGGGGCGAACACCACTTCGTCGCTCGACACATTCAAGCCGGCGTCGGAGGAGGTG CGCCGCAAGCTTCGTGGCGTCGCCCGCCACAAGGCGCGCTTCGAGCTGACAGGCTTTGTC GCCCACATTGGCGAGGGACCGAACTCTGGGCACTACTTCACGTGTGTCCGCTACGGTCCT CAGCTGTGGCGCCGCTTCGACGACGAGACTGTGTCGACGATGGCGGAGCGAGATGTGAAG CAGTACTTTGGCGTTCCATCCGACGCTGTCGGCGTAGTCACGACGACGGCCTACATCCTG CTCTACGAGCGCGTTGCGTAG
Download Fasta

Fasta :-

MDTVGSSVPRYVDAKSMVYTLPCFTPDRSLSSPTSGGAGPRSQPIAIQMSISQQLPMISS SSDFRACAPSSPLSPSRRRFAANLSSTLEIPTYNTTTSTVVEDLSCSSPVLKSYRQHSFS QPRWDACLADSPKSPGMSIHGCASLSAGASEAPVAMSPATSFSSGAGSSSHSTAIHTKFL EITGHPLGLENYGNTCYCNSVIQLIYHCAPLRLRLLELHHVYLTKKGKSGFEEGTVLFHL CSLIGAMHKSNNRTKDKYQREKIVPKDLLNCVRAKNEVFNNDMQQDAHEFTMFLLNDIWD TEQRIMADPANVNLFLKHEASMKKKGSLPFSWKHSKDKHISSHKENKLDKTTSAAATNSD AGTSGGKAVDAQQHFSRELTPLQVILQGQFGSLTACLECENVTARDEVFMDLSLETAQGT SLLRCLDHFGDPEYFWGTNKLRCEECKMPVRAAKTIHVQQLPQYALLIHLKRFQYDVKKQ TFTKKADHVALPMQMDVEEYLTDPEVIEQNLRNKQARSQKNSGVDAGSSTGGHDNSGSGQ KNGANTTSSLDTFKPASEEVRRKLRGVARHKARFELTGFVAHIGEGPNSGHYFTCVRYGP QLWRRFDDETVSTMAERDVKQYFGVPSDAVGVVTTTAYILLYERVA

Ubiquitin carboxyl-terminal hydrolase, UCH

title: Active Site
coordinates: N191,C196,H591,D608

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	LmxM.21.0400	131 S	CLADSPKSP	0.993	unsp	LmxM.21.0400	131 S	CLADSPKSP	0.993	unsp	LmxM.21.0400	131 S	CLADSPKSP	0.993	unsp	LmxM.21.0400	134 S	DSPKSPGMS	0.995	unsp	LmxM.21.0400	229 S	KKGKSGFEE	0.996	unsp	LmxM.21.0400	331 S	SLPFSWKHS	0.996	unsp	LmxM.21.0400	342 S	KHISSHKEN	0.997	unsp	LmxM.21.0400	518 S	KQARSQKNS	0.991	unsp	LmxM.21.0400	522 S	SQKNSGVDA	0.994	unsp	LmxM.21.0400	74 S	SSPLSPSRR	0.996	unsp	LmxM.21.0400	118 S	YRQHSFSQP	0.995	unsp

LmxM.21.0400 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase, putative

ID's

UniProt_ID: E9AV07

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0036459

Computed_GO_Functions: thiol-dependent ubiquitinyl hydrolase activity

Computed_GO_Process_IDs: GO:0016579

Computed_GO_Processes: protein deubiquitination

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs: GO:0004197 GO:0004221

Curated_GO_Functions: cysteine-type endopeptidase activity obsolete ubiquitin thiolesterase activity

Curated_GO_Processes: ubiquitin-dependent protein catabolic process

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Ubiquitin carboxyl-terminal hydrolase, UCH

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India