LmxM.21.0840 | metallo-peptidase, Clan MG, Family M24

_IDPredictionOTHERSPmTPCS_Position
LmxM.21.0840OTHER0.9999990.0000000.000001
No Results

  • Fasta :-

    >LmxM.21.0840 MPPKVSAKSKQQPKQQGGNKKGKGSNDDSDDFDAILAAAVNASKEDAAKNHGNSHQGKRN SNGNGAAPASRSLAAEEPVVPSSADHPENPYPKTADGYPRQTWPEPTVPVSKQFAAGQFP AGEIVDHPGEMNNFRRSSEEKRALARASEQQVQEMREAAEVHRQVRTWAQSWIKPGLSLM LMTDRIEKKLNELIGKDGILRGQAFPTGCSLNNVAAHYTPNTADEKVVLTYDDVMKVDFG THINGRIIDCAWTVAFNPMFDPLLQAVKEATYEGIKQAGIDVRLGDIGAAIEEVMESHEV EINGKVHQVKSIRNLSGHNIAPYIIHSGKSVPIVKGGEQTKMEEGEVFAIETFGSTGRGF VNEDLECSHYMMRPGAEVMQLRSEKAQQLLKHIHKSYSTLAFCRKWLDRDGFDRHLMNLN RLVDEGAVNKYPPLVDVKGSYTAQYEHTIYLGPTAKEILSKGSDY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/651 Sequence name : 651 Sequence length : 465 VALUES OF COMPUTED PARAMETERS Coef20 : 2.649 CoefTot : -2.961 ChDiff : -5 ZoneTo : 26 KR : 7 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.894 0.900 -0.108 0.470 MesoH : -0.788 0.223 -0.446 0.198 MuHd_075 : 21.937 10.699 7.757 4.925 MuHd_095 : 23.102 12.367 8.240 4.449 MuHd_100 : 21.708 7.937 7.022 3.752 MuHd_105 : 20.261 5.734 5.922 2.611 Hmax_075 : -6.300 -8.750 -3.600 -0.082 Hmax_095 : 0.300 -6.800 -4.618 0.610 Hmax_100 : 0.300 -4.500 -2.073 0.610 Hmax_105 : -9.400 -13.300 -5.584 -1.620 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8520 0.1480 DFMC : 0.6032 0.3968
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 465 LmxM.21.0840 MPPKVSAKSKQQPKQQGGNKKGKGSNDDSDDFDAILAAAVNASKEDAAKNHGNSHQGKRNSNGNGAAPASRSLAAEEPVV 80 PSSADHPENPYPKTADGYPRQTWPEPTVPVSKQFAAGQFPAGEIVDHPGEMNNFRRSSEEKRALARASEQQVQEMREAAE 160 VHRQVRTWAQSWIKPGLSLMLMTDRIEKKLNELIGKDGILRGQAFPTGCSLNNVAAHYTPNTADEKVVLTYDDVMKVDFG 240 THINGRIIDCAWTVAFNPMFDPLLQAVKEATYEGIKQAGIDVRLGDIGAAIEEVMESHEVEINGKVHQVKSIRNLSGHNI 320 APYIIHSGKSVPIVKGGEQTKMEEGEVFAIETFGSTGRGFVNEDLECSHYMMRPGAEVMQLRSEKAQQLLKHIHKSYSTL 400 AFCRKWLDRDGFDRHLMNLNRLVDEGAVNKYPPLVDVKGSYTAQYEHTIYLGPTAKEILSKGSDY 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.21.0840 4 ---MPPK|VS 0.064 . LmxM.21.0840 8 PPKVSAK|SK 0.112 . LmxM.21.0840 10 KVSAKSK|QQ 0.096 . LmxM.21.0840 14 KSKQQPK|QQ 0.080 . LmxM.21.0840 20 KQQGGNK|KG 0.060 . LmxM.21.0840 21 QQGGNKK|GK 0.141 . LmxM.21.0840 23 GGNKKGK|GS 0.090 . LmxM.21.0840 44 AAVNASK|ED 0.060 . LmxM.21.0840 49 SKEDAAK|NH 0.072 . LmxM.21.0840 58 GNSHQGK|RN 0.101 . LmxM.21.0840 59 NSHQGKR|NS 0.230 . LmxM.21.0840 71 GAAPASR|SL 0.192 . LmxM.21.0840 93 PENPYPK|TA 0.089 . LmxM.21.0840 100 TADGYPR|QT 0.124 . LmxM.21.0840 112 PTVPVSK|QF 0.067 . LmxM.21.0840 135 GEMNNFR|RS 0.109 . LmxM.21.0840 136 EMNNFRR|SS 0.424 . LmxM.21.0840 141 RRSSEEK|RA 0.074 . LmxM.21.0840 142 RSSEEKR|AL 0.248 . LmxM.21.0840 146 EKRALAR|AS 0.162 . LmxM.21.0840 156 QQVQEMR|EA 0.108 . LmxM.21.0840 163 EAAEVHR|QV 0.134 . LmxM.21.0840 166 EVHRQVR|TW 0.308 . LmxM.21.0840 174 WAQSWIK|PG 0.058 . LmxM.21.0840 185 LMLMTDR|IE 0.068 . LmxM.21.0840 188 MTDRIEK|KL 0.090 . LmxM.21.0840 189 TDRIEKK|LN 0.124 . LmxM.21.0840 196 LNELIGK|DG 0.065 . LmxM.21.0840 201 GKDGILR|GQ 0.069 . LmxM.21.0840 226 PNTADEK|VV 0.064 . LmxM.21.0840 236 TYDDVMK|VD 0.059 . LmxM.21.0840 246 GTHINGR|II 0.115 . LmxM.21.0840 268 PLLQAVK|EA 0.059 . LmxM.21.0840 276 ATYEGIK|QA 0.064 . LmxM.21.0840 283 QAGIDVR|LG 0.092 . LmxM.21.0840 305 EVEINGK|VH 0.052 . LmxM.21.0840 310 GKVHQVK|SI 0.097 . LmxM.21.0840 313 HQVKSIR|NL 0.104 . LmxM.21.0840 329 YIIHSGK|SV 0.127 . LmxM.21.0840 335 KSVPIVK|GG 0.068 . LmxM.21.0840 341 KGGEQTK|ME 0.072 . LmxM.21.0840 358 TFGSTGR|GF 0.082 . LmxM.21.0840 373 CSHYMMR|PG 0.086 . LmxM.21.0840 382 AEVMQLR|SE 0.132 . LmxM.21.0840 385 MQLRSEK|AQ 0.100 . LmxM.21.0840 391 KAQQLLK|HI 0.073 . LmxM.21.0840 395 LLKHIHK|SY 0.088 . LmxM.21.0840 404 STLAFCR|KW 0.076 . LmxM.21.0840 405 TLAFCRK|WL 0.106 . LmxM.21.0840 409 CRKWLDR|DG 0.116 . LmxM.21.0840 414 DRDGFDR|HL 0.095 . LmxM.21.0840 421 HLMNLNR|LV 0.141 . LmxM.21.0840 430 DEGAVNK|YP 0.057 . LmxM.21.0840 438 PPLVDVK|GS 0.067 . LmxM.21.0840 456 YLGPTAK|EI 0.066 . LmxM.21.0840 461 AKEILSK|GS 0.076 . ____________________________^_________________

  • Fasta :-

    >LmxM.21.0840 ATGCCACCAAAGGTTTCTGCGAAAAGCAAGCAGCAGCCCAAGCAGCAGGGCGGCAACAAG AAGGGCAAGGGCAGCAACGATGACAGCGACGACTTTGACGCGATATTGGCGGCAGCAGTG AACGCGTCCAAGGAGGACGCGGCCAAAAACCATGGGAATAGCCATCAGGGTAAGCGCAAC AGCAACGGGAATGGTGCTGCACCGGCCAGTAGGAGCCTCGCTGCGGAGGAGCCAGTTGTG CCGAGCTCGGCCGATCACCCGGAGAACCCCTACCCGAAGACGGCGGATGGCTACCCGCGG CAGACGTGGCCAGAGCCGACGGTACCAGTGTCGAAGCAGTTTGCTGCTGGCCAGTTCCCG GCCGGGGAGATCGTCGACCACCCTGGTGAGATGAACAACTTCCGACGCAGCAGTGAGGAA AAGCGGGCGTTGGCCCGCGCGAGTGAGCAGCAGGTGCAGGAGATGCGCGAGGCGGCCGAG GTGCACCGCCAGGTCCGCACCTGGGCACAGAGCTGGATCAAGCCAGGCCTATCACTGATG CTCATGACGGATCGCATCGAGAAGAAGCTGAATGAGCTGATTGGCAAGGACGGCATCCTT CGGGGACAGGCCTTCCCGACAGGATGCTCGCTGAACAATGTCGCAGCGCACTACACACCC AATACCGCTGACGAAAAAGTGGTTTTGACGTATGATGACGTCATGAAGGTCGACTTCGGC ACCCACATCAATGGCCGCATCATCGACTGCGCCTGGACGGTCGCCTTCAATCCTATGTTC GACCCGCTGCTGCAGGCCGTGAAGGAGGCGACGTACGAGGGCATCAAGCAGGCGGGCATT GACGTCCGTCTCGGCGACATCGGCGCCGCCATCGAGGAGGTGATGGAGTCGCATGAGGTG GAGATCAACGGTAAGGTGCACCAGGTGAAGAGCATCCGAAACTTGTCCGGCCACAACATC GCCCCCTACATCATCCATAGCGGCAAGAGTGTGCCCATCGTGAAAGGCGGCGAGCAGACG AAGATGGAGGAGGGGGAGGTGTTTGCCATCGAGACCTTCGGTTCCACTGGTCGCGGCTTC GTGAACGAGGATTTGGAGTGCTCCCACTACATGATGCGACCCGGAGCGGAGGTGATGCAG TTGCGCTCGGAGAAGGCGCAGCAGCTGCTGAAGCACATCCACAAGTCGTACAGCACGTTG GCGTTCTGCCGCAAATGGCTCGACCGCGACGGCTTCGATCGTCACCTCATGAACCTGAAC CGCCTGGTCGATGAGGGCGCCGTGAACAAGTACCCGCCGCTGGTGGACGTCAAGGGCAGC TATACAGCTCAATATGAGCACACCATCTACCTCGGCCCAACCGCGAAGGAAATTCTTTCC AAGGGAAGCGACTACTAG
  • Download Fasta

  • Fasta :-

    MPPKVSAKSKQQPKQQGGNKKGKGSNDDSDDFDAILAAAVNASKEDAAKNHGNSHQGKRN SNGNGAAPASRSLAAEEPVVPSSADHPENPYPKTADGYPRQTWPEPTVPVSKQFAAGQFP AGEIVDHPGEMNNFRRSSEEKRALARASEQQVQEMREAAEVHRQVRTWAQSWIKPGLSLM LMTDRIEKKLNELIGKDGILRGQAFPTGCSLNNVAAHYTPNTADEKVVLTYDDVMKVDFG THINGRIIDCAWTVAFNPMFDPLLQAVKEATYEGIKQAGIDVRLGDIGAAIEEVMESHEV EINGKVHQVKSIRNLSGHNIAPYIIHSGKSVPIVKGGEQTKMEEGEVFAIETFGSTGRGF VNEDLECSHYMMRPGAEVMQLRSEKAQQLLKHIHKSYSTLAFCRKWLDRDGFDRHLMNLN RLVDEGAVNKYPPLVDVKGSYTAQYEHTIYLGPTAKEILSKGSDY

  • title: active site
  • coordinates: H217,D238,D249,H318,E351,E446
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.21.0840137 SNFRRSSEEK0.998unspLmxM.21.0840137 SNFRRSSEEK0.998unspLmxM.21.0840137 SNFRRSSEEK0.998unspLmxM.21.0840138 SFRRSSEEKR0.995unspLmxM.21.084025 SKGKGSNDDS0.996unspLmxM.21.084043 SAVNASKEDA0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India