LmxM.24.0650 | PPPDE putative peptidase domain containing protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.24.0650OTHER0.9960660.0010450.002888
No Results

  • Fasta :-

    >LmxM.24.0650 MGLSRGHSPRLRRTEVQVPVTLNVYSLIESNKRLSKMGMGVFHTGVVVYGIEWGYGEVVD NPNASGLFCVHPGQAAGTLYRTIRIGHTTRSPMQVDTILHRLENEWRSSDYHILHHNCNH FAQAFCDLLSTTEKLQVPSWCNRAARVGDRVIPRRLATKVQHMMDDEPPKAAAPPTPASN ISEVPTSVVPHEWYLHPSICQPLRYIDERKPLSVASQGGHSVSASAVAVDGGSSHCSAEC GIVPPPGYEMADTGRVCPPITRRETYCSTDEKGSITHIMAIEEQPSVTPSSRRESACKSA MSQRATKSTSGHSPAPPSLGITFSSGGEDRVVLPRMRVSASQSCSAAPTGSSQASEIEMD VENVLQSETSEEPSPPVMSHLPTISSPNRGTANPRKATPSGSTTNRRRGASFEQQHHVES DSREEGAEASLEKPLCTVRNSSMESMSVELSDHGDSSAQPPSSFLATSNAMPVGCITTLL PTSPKPPAEEATRRSSNMMAGERDVTTGVANMSSEASNNSSGDFASAKHNHRTQTTTSSS ATKEQKPKREPGNEFSDITGALVYGAPLPSATAAASAAGIKHKDSSVWRLLKNQCGLSGK TGTGNAVHKYLPTPSASSTPSSSSSHLQPEAHDEKAVSVPADSGAVDPAADSTLASRQER DHTHALLSASASPSSHHFTPVALEDKDSGHDAVSNEVQDSNGTTPTPTTAAPQNTPHMPH LGGDPPASATELLPQSPERRLSRSETSSAQGGVPSPMSPPNLGPATTASQPMCSPGPRFP PSFVTPERPNIITSSGAVTTGCSPAAAHQRRRASSSAAMSDSPPPPRERCRRPIPFAVRQ RGNDENVAPALRLDLDSDEAEPPVRRSSSRHSRTAGEAGTPSTTDKTAHAPMVLCSCGPS SLLREDTATGDDRTGENASSDHSEASLTAQSSLNTELVDPSRLSPTPSESIPAPEANEPP TPPPCDTH
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/589 Sequence name : 589 Sequence length : 968 VALUES OF COMPUTED PARAMETERS Coef20 : 4.058 CoefTot : -2.068 ChDiff : -16 ZoneTo : 51 KR : 7 DE : 2 CleavSite : 15 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.565 1.324 0.282 0.593 MesoH : -0.133 0.201 -0.270 0.226 MuHd_075 : 17.055 14.267 4.798 4.078 MuHd_095 : 34.230 20.890 10.138 7.396 MuHd_100 : 37.140 23.027 11.224 7.776 MuHd_105 : 36.173 25.821 11.261 8.509 Hmax_075 : 8.050 25.433 0.176 4.573 Hmax_095 : 15.487 13.388 2.475 5.180 Hmax_100 : 13.800 11.700 2.025 4.320 Hmax_105 : 9.000 16.700 2.501 5.340 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9040 0.0960 DFMC : 0.8348 0.1652
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 968 LmxM.24.0650 MGLSRGHSPRLRRTEVQVPVTLNVYSLIESNKRLSKMGMGVFHTGVVVYGIEWGYGEVVDNPNASGLFCVHPGQAAGTLY 80 RTIRIGHTTRSPMQVDTILHRLENEWRSSDYHILHHNCNHFAQAFCDLLSTTEKLQVPSWCNRAARVGDRVIPRRLATKV 160 QHMMDDEPPKAAAPPTPASNISEVPTSVVPHEWYLHPSICQPLRYIDERKPLSVASQGGHSVSASAVAVDGGSSHCSAEC 240 GIVPPPGYEMADTGRVCPPITRRETYCSTDEKGSITHIMAIEEQPSVTPSSRRESACKSAMSQRATKSTSGHSPAPPSLG 320 ITFSSGGEDRVVLPRMRVSASQSCSAAPTGSSQASEIEMDVENVLQSETSEEPSPPVMSHLPTISSPNRGTANPRKATPS 400 GSTTNRRRGASFEQQHHVESDSREEGAEASLEKPLCTVRNSSMESMSVELSDHGDSSAQPPSSFLATSNAMPVGCITTLL 480 PTSPKPPAEEATRRSSNMMAGERDVTTGVANMSSEASNNSSGDFASAKHNHRTQTTTSSSATKEQKPKREPGNEFSDITG 560 ALVYGAPLPSATAAASAAGIKHKDSSVWRLLKNQCGLSGKTGTGNAVHKYLPTPSASSTPSSSSSHLQPEAHDEKAVSVP 640 ADSGAVDPAADSTLASRQERDHTHALLSASASPSSHHFTPVALEDKDSGHDAVSNEVQDSNGTTPTPTTAAPQNTPHMPH 720 LGGDPPASATELLPQSPERRLSRSETSSAQGGVPSPMSPPNLGPATTASQPMCSPGPRFPPSFVTPERPNIITSSGAVTT 800 GCSPAAAHQRRRASSSAAMSDSPPPPRERCRRPIPFAVRQRGNDENVAPALRLDLDSDEAEPPVRRSSSRHSRTAGEAGT 880 PSTTDKTAHAPMVLCSCGPSSLLREDTATGDDRTGENASSDHSEASLTAQSSLNTELVDPSRLSPTPSESIPAPEANEPP 960 TPPPCDTH 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ...................P............................................................ 720 ................................................................................ 800 ........................................................................P....... 880 ................................................................................ 960 ........ 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ LmxM.24.0650 5 --MGLSR|GH 0.096 . LmxM.24.0650 10 SRGHSPR|LR 0.128 . LmxM.24.0650 12 GHSPRLR|RT 0.122 . LmxM.24.0650 13 HSPRLRR|TE 0.417 . LmxM.24.0650 32 SLIESNK|RL 0.082 . LmxM.24.0650 33 LIESNKR|LS 0.139 . LmxM.24.0650 36 SNKRLSK|MG 0.187 . LmxM.24.0650 81 AAGTLYR|TI 0.108 . LmxM.24.0650 84 TLYRTIR|IG 0.258 . LmxM.24.0650 90 RIGHTTR|SP 0.152 . LmxM.24.0650 101 VDTILHR|LE 0.069 . LmxM.24.0650 107 RLENEWR|SS 0.150 . LmxM.24.0650 134 LLSTTEK|LQ 0.061 . LmxM.24.0650 143 VPSWCNR|AA 0.164 . LmxM.24.0650 146 WCNRAAR|VG 0.337 . LmxM.24.0650 150 AARVGDR|VI 0.090 . LmxM.24.0650 154 GDRVIPR|RL 0.118 . LmxM.24.0650 155 DRVIPRR|LA 0.285 . LmxM.24.0650 159 PRRLATK|VQ 0.065 . LmxM.24.0650 170 MDDEPPK|AA 0.073 . LmxM.24.0650 204 SICQPLR|YI 0.112 . LmxM.24.0650 209 LRYIDER|KP 0.087 . LmxM.24.0650 210 RYIDERK|PL 0.093 . LmxM.24.0650 255 EMADTGR|VC 0.082 . LmxM.24.0650 262 VCPPITR|RE 0.062 . LmxM.24.0650 263 CPPITRR|ET 0.143 . LmxM.24.0650 272 YCSTDEK|GS 0.080 . LmxM.24.0650 292 SVTPSSR|RE 0.085 . LmxM.24.0650 293 VTPSSRR|ES 0.107 . LmxM.24.0650 298 RRESACK|SA 0.127 . LmxM.24.0650 304 KSAMSQR|AT 0.108 . LmxM.24.0650 307 MSQRATK|ST 0.310 . LmxM.24.0650 330 SSGGEDR|VV 0.111 . LmxM.24.0650 335 DRVVLPR|MR 0.079 . LmxM.24.0650 337 VVLPRMR|VS 0.066 . LmxM.24.0650 389 TISSPNR|GT 0.113 . LmxM.24.0650 395 RGTANPR|KA 0.123 . LmxM.24.0650 396 GTANPRK|AT 0.097 . LmxM.24.0650 406 SGSTTNR|RR 0.139 . LmxM.24.0650 407 GSTTNRR|RG 0.117 . LmxM.24.0650 408 STTNRRR|GA 0.240 . LmxM.24.0650 423 HVESDSR|EE 0.082 . LmxM.24.0650 433 AEASLEK|PL 0.075 . LmxM.24.0650 439 KPLCTVR|NS 0.080 . LmxM.24.0650 485 LLPTSPK|PP 0.057 . LmxM.24.0650 493 PAEEATR|RS 0.092 . LmxM.24.0650 494 AEEATRR|SS 0.180 . LmxM.24.0650 503 NMMAGER|DV 0.166 . LmxM.24.0650 528 GDFASAK|HN 0.084 . LmxM.24.0650 532 SAKHNHR|TQ 0.080 . LmxM.24.0650 543 TSSSATK|EQ 0.075 . LmxM.24.0650 546 SATKEQK|PK 0.065 . LmxM.24.0650 548 TKEQKPK|RE 0.069 . LmxM.24.0650 549 KEQKPKR|EP 0.266 . LmxM.24.0650 581 ASAAGIK|HK 0.066 . LmxM.24.0650 583 AAGIKHK|DS 0.088 . LmxM.24.0650 589 KDSSVWR|LL 0.107 . LmxM.24.0650 592 SVWRLLK|NQ 0.085 . LmxM.24.0650 600 QCGLSGK|TG 0.060 . LmxM.24.0650 609 TGNAVHK|YL 0.075 . LmxM.24.0650 635 PEAHDEK|AV 0.077 . LmxM.24.0650 657 DSTLASR|QE 0.080 . LmxM.24.0650 660 LASRQER|DH 0.500 *ProP* LmxM.24.0650 686 PVALEDK|DS 0.070 . LmxM.24.0650 739 LPQSPER|RL 0.149 . LmxM.24.0650 740 PQSPERR|LS 0.144 . LmxM.24.0650 743 PERRLSR|SE 0.351 . LmxM.24.0650 778 MCSPGPR|FP 0.090 . LmxM.24.0650 788 SFVTPER|PN 0.081 . LmxM.24.0650 810 PAAAHQR|RR 0.079 . LmxM.24.0650 811 AAAHQRR|RA 0.266 . LmxM.24.0650 812 AAHQRRR|AS 0.205 . LmxM.24.0650 827 DSPPPPR|ER 0.071 . LmxM.24.0650 829 PPPPRER|CR 0.090 . LmxM.24.0650 831 PPRERCR|RP 0.084 . LmxM.24.0650 832 PRERCRR|PI 0.490 . LmxM.24.0650 839 PIPFAVR|QR 0.086 . LmxM.24.0650 841 PFAVRQR|GN 0.107 . LmxM.24.0650 852 NVAPALR|LD 0.069 . LmxM.24.0650 865 EAEPPVR|RS 0.071 . LmxM.24.0650 866 AEPPVRR|SS 0.206 . LmxM.24.0650 870 VRRSSSR|HS 0.158 . LmxM.24.0650 873 SSSRHSR|TA 0.690 *ProP* LmxM.24.0650 886 TPSTTDK|TA 0.094 . LmxM.24.0650 904 GPSSLLR|ED 0.108 . LmxM.24.0650 913 TATGDDR|TG 0.081 . LmxM.24.0650 942 ELVDPSR|LS 0.068 . ____________________________^_________________

  • Fasta :-

    >LmxM.24.0650 ATGGGCCTCTCGCGCGGCCACAGCCCACGTCTGCGCCGCACGGAGGTGCAGGTACCCGTT ACCCTCAACGTTTACAGCCTGATCGAGAGCAACAAGAGGCTGTCCAAGATGGGCATGGGT GTCTTCCACACAGGCGTTGTCGTGTACGGCATCGAGTGGGGCTACGGCGAGGTGGTGGAC AACCCCAACGCCTCCGGGCTGTTCTGCGTGCATCCTGGGCAAGCTGCTGGCACCCTTTAC CGTACCATCCGCATCGGTCACACCACTCGGTCGCCCATGCAGGTGGACACCATCCTGCAC CGGCTGGAGAACGAGTGGCGCAGCAGCGACTACCACATCCTGCACCACAACTGCAATCAC TTTGCCCAGGCCTTCTGCGATCTCCTGAGCACCACAGAGAAGCTGCAGGTGCCGTCATGG TGCAACCGCGCCGCGCGCGTCGGCGACCGCGTCATCCCACGCCGGCTGGCGACGAAGGTG CAGCATATGATGGACGACGAACCGCCCAAGGCCGCTGCGCCACCGACGCCGGCGTCAAAC ATCAGCGAGGTGCCCACATCGGTGGTGCCACACGAGTGGTACCTGCACCCCAGCATCTGC CAGCCGCTGCGGTACATCGACGAAAGAAAGCCGCTGTCTGTGGCCAGCCAAGGCGGGCAT AGTGTCTCGGCATCAGCGGTAGCTGTTGATGGCGGCAGCTCCCACTGCAGCGCCGAGTGT GGCATTGTGCCGCCGCCAGGCTACGAGATGGCCGACACCGGAAGGGTGTGCCCGCCCATC ACCCGGCGCGAGACGTACTGCAGCACGGACGAGAAGGGCAGCATCACGCACATAATGGCC ATCGAGGAGCAGCCCTCAGTAACCCCGTCCTCTCGGCGTGAGTCCGCTTGCAAGTCGGCC ATGTCTCAACGCGCAACCAAGTCCACGTCTGGCCACAGTCCGGCGCCGCCGTCGCTTGGC ATTACCTTCAGCAGCGGCGGGGAGGACCGTGTGGTGCTGCCGCGCATGCGGGTTTCGGCA AGCCAGTCGTGCAGCGCAGCACCAACCGGGTCGTCACAGGCCTCGGAGATCGAAATGGAC GTGGAGAACGTCCTCCAAAGCGAAACGAGCGAGGAGCCGTCGCCTCCCGTCATGTCGCAC CTGCCGACGATCAGCTCCCCCAATCGCGGCACCGCCAATCCTCGAAAGGCGACGCCGTCG GGCAGCACTACCAACCGGCGGCGAGGCGCAAGTTTCGAGCAGCAGCATCATGTCGAAAGC GACTCGAGGGAGGAGGGTGCAGAAGCATCCTTGGAGAAGCCGCTGTGCACGGTGCGCAAC TCATCTATGGAGTCGATGAGCGTGGAGCTGTCTGACCACGGCGACTCCTCAGCACAGCCG CCCTCTTCGTTCCTAGCGACGTCGAATGCAATGCCGGTCGGCTGCATCACGACTTTGTTG CCCACCTCACCGAAACCACCAGCCGAGGAAGCCACCCGGCGCAGCAGCAACATGATGGCA GGCGAGCGCGACGTCACCACTGGCGTCGCGAATATGTCAAGCGAGGCGAGCAACAACTCG AGCGGCGACTTCGCGTCAGCCAAGCATAACCACAGAACACAGACCACCACCAGCAGCAGC GCAACCAAAGAGCAGAAGCCAAAACGGGAGCCTGGTAACGAATTCAGCGACATCACCGGT GCGCTGGTCTACGGTGCACCCCTCCCATCCGCCACCGCAGCAGCATCAGCGGCGGGCATC AAGCACAAGGACAGCTCGGTGTGGAGACTTCTCAAGAACCAATGTGGCCTCTCGGGCAAA ACTGGCACCGGAAATGCGGTCCACAAGTACCTCCCCACCCCGTCGGCAAGTTCGACGCCG TCCTCATCCTCCTCGCATCTACAGCCTGAGGCCCATGACGAGAAGGCGGTCTCCGTACCT GCTGATAGCGGCGCTGTCGATCCTGCCGCAGATTCAACACTGGCATCGAGGCAGGAGAGG GACCACACGCACGCGCTCCTGTCCGCTTCAGCCTCTCCTTCGTCGCACCACTTTACGCCT GTTGCGTTGGAAGACAAGGACAGCGGACATGACGCTGTATCGAACGAGGTGCAGGACTCG AACGGCACCACACCGACCCCAACAACGGCTGCGCCGCAGAACACGCCCCACATGCCGCAT CTGGGCGGCGACCCGCCAGCGTCCGCAACGGAGCTGCTGCCACAGTCTCCTGAGCGGCGC CTGTCGCGCAGCGAGACGTCGTCGGCGCAAGGCGGTGTTCCTTCGCCTATGAGCCCGCCA AATCTGGGTCCGGCAACAACAGCGTCGCAGCCCATGTGCAGTCCAGGGCCCCGGTTCCCG CCCTCCTTTGTGACACCGGAGCGACCCAACATCATCACCAGTAGTGGGGCTGTGACAACG GGGTGCTCGCCTGCCGCGGCGCATCAGCGCCGGCGCGCCAGCTCATCGGCCGCGATGAGC GACTCCCCGCCCCCGCCAAGGGAGCGGTGCCGGAGACCCATCCCCTTTGCAGTAAGGCAG CGCGGCAACGATGAGAATGTCGCACCCGCGCTCCGGCTGGACTTGGACAGCGATGAGGCG GAGCCGCCAGTGCGCCGCAGCAGCAGTCGCCACAGTCGAACAGCAGGGGAAGCTGGTACG CCGTCGACGACCGACAAGACGGCACACGCGCCGATGGTACTATGCTCGTGTGGACCGTCA TCGCTGCTCCGCGAGGACACTGCGACGGGTGACGATCGAACCGGCGAGAACGCATCCAGC GACCACAGTGAAGCCTCTCTGACTGCGCAGTCTAGCCTGAACACCGAGCTGGTGGATCCG TCACGCTTGAGCCCGACGCCTTCGGAGAGCATCCCAGCGCCGGAAGCCAACGAGCCCCCT ACCCCACCTCCATGTGACACTCATTGA
  • Download Fasta

  • Fasta :-

    MGLSRGHSPRLRRTEVQVPVTLNVYSLIESNKRLSKMGMGVFHTGVVVYGIEWGYGEVVD NPNASGLFCVHPGQAAGTLYRTIRIGHTTRSPMQVDTILHRLENEWRSSDYHILHHNCNH FAQAFCDLLSTTEKLQVPSWCNRAARVGDRVIPRRLATKVQHMMDDEPPKAAAPPTPASN ISEVPTSVVPHEWYLHPSICQPLRYIDERKPLSVASQGGHSVSASAVAVDGGSSHCSAEC GIVPPPGYEMADTGRVCPPITRRETYCSTDEKGSITHIMAIEEQPSVTPSSRRESACKSA MSQRATKSTSGHSPAPPSLGITFSSGGEDRVVLPRMRVSASQSCSAAPTGSSQASEIEMD VENVLQSETSEEPSPPVMSHLPTISSPNRGTANPRKATPSGSTTNRRRGASFEQQHHVES DSREEGAEASLEKPLCTVRNSSMESMSVELSDHGDSSAQPPSSFLATSNAMPVGCITTLL PTSPKPPAEEATRRSSNMMAGERDVTTGVANMSSEASNNSSGDFASAKHNHRTQTTTSSS ATKEQKPKREPGNEFSDITGALVYGAPLPSATAAASAAGIKHKDSSVWRLLKNQCGLSGK TGTGNAVHKYLPTPSASSTPSSSSSHLQPEAHDEKAVSVPADSGAVDPAADSTLASRQER DHTHALLSASASPSSHHFTPVALEDKDSGHDAVSNEVQDSNGTTPTPTTAAPQNTPHMPH LGGDPPASATELLPQSPERRLSRSETSSAQGGVPSPMSPPNLGPATTASQPMCSPGPRFP PSFVTPERPNIITSSGAVTTGCSPAAAHQRRRASSSAAMSDSPPPPRERCRRPIPFAVRQ RGNDENVAPALRLDLDSDEAEPPVRRSSSRHSRTAGEAGTPSTTDKTAHAPMVLCSCGPS SLLREDTATGDDRTGENASSDHSEASLTAQSSLNTELVDPSRLSPTPSESIPAPEANEPP TPPPCDTH

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.24.0650291 SVTPSSRRES0.997unspLmxM.24.0650291 SVTPSSRRES0.997unspLmxM.24.0650291 SVTPSSRRES0.997unspLmxM.24.0650295 SSRRESACKS0.997unspLmxM.24.0650302 SKSAMSQRAT0.994unspLmxM.24.0650355 SSSQASEIEM0.996unspLmxM.24.0650370 SQSETSEEPS0.991unspLmxM.24.0650411 SRRGASFEQQ0.995unspLmxM.24.0650422 SVESDSREEG0.996unspLmxM.24.0650442 SVRNSSMESM0.997unspLmxM.24.0650447 SMESMSVELS0.991unspLmxM.24.0650483 SLLPTSPKPP0.997unspLmxM.24.0650496 STRRSSNMMA0.994unspLmxM.24.0650538 SQTTTSSSAT0.991unspLmxM.24.0650688 SEDKDSGHDA0.995unspLmxM.24.0650742 SERRLSRSET0.998unspLmxM.24.0650814 SRRRASSSAA0.994unspLmxM.24.0650867 SPVRRSSSRH0.994unspLmxM.24.0650868 SVRRSSSRHS0.998unspLmxM.24.0650872 SSSRHSRTAG0.998unspLmxM.24.0650944 SPSRLSPTPS0.997unspLmxM.24.06508 SSRGHSPRLR0.994unspLmxM.24.065035 SNKRLSKMGM0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India