LmxM.25.1480 | calpain family cysteine protease-like protein

_IDPredictionOTHERSPmTPCS_Position
LmxM.25.1480OTHER0.9999780.0000050.000017
No Results

  • Fasta :-

    >LmxM.25.1480 MGNGCCTCCDPKPEYKLGKPLVSGKATPCFNDGRLFKIVKGDTWYFYNDTQDYQKVTADF GSGSNIVAMSDTELVRKNDSGACTATVSVFPLETKAMVKAKEVNGFNVKYSGIPFTDADR QKLRQKAAVQISADLAEMRKLREKNPKVNNQNRLLKVARRKGKKYVDTSFPPTSQSLIRP GIDSEPDSCLKRPETIAWRRPEDFLPKKWHPKIRLFGNISPKDISQGQLGDCYYLCALAA LAEHDTAIKGIFKNHHGCCIRSQEQKHGAWRVNLNISGWWRTIIIDSYLPSVQLLPVFAR NRNHPNELWVSFSEKAYAKAFGSYQAIVAGYPWQALEDLTGFPAYHFGNMWRTAQTDAKT QKGLFDSLHRWNEKKYLICISTPSKGALKMASKQLPANHCEALFEKAGLSIGHAYSVLDV KHFPLHHLCMLKIRNPWGSHVEWTGDWGDDSPLWNRYPFIKLACRPQKKADGIFWMEWRD VSKFFDSGSVCFRRGNWFRSWYDYRVLGSFEDLVCDTALLIIVSKTSQFPAYISLHQKDC RGLAAGDPDSKYACVMISISEGDVNGSQQKVVANSSENPEEPSTEYLFQESRSVSLYYKF TKARKYLVIPRRMKSSTGNNVPKKKYVIALRTQTKISSEDVVVNIVRLDKNNAVFKNVAS FDAGTLTSLTTLYQIKDGNNVFRTYRSDNLRNGKKQHNAEFELVV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/248 Sequence name : 248 Sequence length : 705 VALUES OF COMPUTED PARAMETERS Coef20 : 2.617 CoefTot : -0.634 ChDiff : 31 ZoneTo : 9 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.882 1.606 0.076 0.583 MesoH : -0.588 0.152 -0.383 0.207 MuHd_075 : 4.348 3.080 4.003 1.347 MuHd_095 : 9.529 13.373 5.212 1.706 MuHd_100 : 9.406 8.342 4.104 0.725 MuHd_105 : 15.561 6.474 5.268 2.929 Hmax_075 : 3.800 2.900 2.116 1.980 Hmax_095 : 3.675 6.738 3.135 2.021 Hmax_100 : 7.700 5.400 2.754 2.220 Hmax_105 : 1.000 3.800 2.332 2.030 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9938 0.0062 DFMC : 0.9949 0.0051
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 705 LmxM.25.1480 MGNGCCTCCDPKPEYKLGKPLVSGKATPCFNDGRLFKIVKGDTWYFYNDTQDYQKVTADFGSGSNIVAMSDTELVRKNDS 80 GACTATVSVFPLETKAMVKAKEVNGFNVKYSGIPFTDADRQKLRQKAAVQISADLAEMRKLREKNPKVNNQNRLLKVARR 160 KGKKYVDTSFPPTSQSLIRPGIDSEPDSCLKRPETIAWRRPEDFLPKKWHPKIRLFGNISPKDISQGQLGDCYYLCALAA 240 LAEHDTAIKGIFKNHHGCCIRSQEQKHGAWRVNLNISGWWRTIIIDSYLPSVQLLPVFARNRNHPNELWVSFSEKAYAKA 320 FGSYQAIVAGYPWQALEDLTGFPAYHFGNMWRTAQTDAKTQKGLFDSLHRWNEKKYLICISTPSKGALKMASKQLPANHC 400 EALFEKAGLSIGHAYSVLDVKHFPLHHLCMLKIRNPWGSHVEWTGDWGDDSPLWNRYPFIKLACRPQKKADGIFWMEWRD 480 VSKFFDSGSVCFRRGNWFRSWYDYRVLGSFEDLVCDTALLIIVSKTSQFPAYISLHQKDCRGLAAGDPDSKYACVMISIS 560 EGDVNGSQQKVVANSSENPEEPSTEYLFQESRSVSLYYKFTKARKYLVIPRRMKSSTGNNVPKKKYVIALRTQTKISSED 640 VVVNIVRLDKNNAVFKNVASFDAGTLTSLTTLYQIKDGNNVFRTYRSDNLRNGKKQHNAEFELVV 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.25.1480 12 CTCCDPK|PE 0.059 . LmxM.25.1480 16 DPKPEYK|LG 0.059 . LmxM.25.1480 19 PEYKLGK|PL 0.072 . LmxM.25.1480 25 KPLVSGK|AT 0.066 . LmxM.25.1480 34 PCFNDGR|LF 0.081 . LmxM.25.1480 37 NDGRLFK|IV 0.186 . LmxM.25.1480 40 RLFKIVK|GD 0.063 . LmxM.25.1480 55 DTQDYQK|VT 0.062 . LmxM.25.1480 76 SDTELVR|KN 0.084 . LmxM.25.1480 77 DTELVRK|ND 0.077 . LmxM.25.1480 95 VFPLETK|AM 0.056 . LmxM.25.1480 99 ETKAMVK|AK 0.068 . LmxM.25.1480 101 KAMVKAK|EV 0.106 . LmxM.25.1480 109 VNGFNVK|YS 0.069 . LmxM.25.1480 120 PFTDADR|QK 0.064 . LmxM.25.1480 122 TDADRQK|LR 0.072 . LmxM.25.1480 124 ADRQKLR|QK 0.121 . LmxM.25.1480 126 RQKLRQK|AA 0.073 . LmxM.25.1480 139 ADLAEMR|KL 0.089 . LmxM.25.1480 140 DLAEMRK|LR 0.073 . LmxM.25.1480 142 AEMRKLR|EK 0.283 . LmxM.25.1480 144 MRKLREK|NP 0.061 . LmxM.25.1480 147 LREKNPK|VN 0.075 . LmxM.25.1480 153 KVNNQNR|LL 0.106 . LmxM.25.1480 156 NQNRLLK|VA 0.145 . LmxM.25.1480 159 RLLKVAR|RK 0.119 . LmxM.25.1480 160 LLKVARR|KG 0.138 . LmxM.25.1480 161 LKVARRK|GK 0.098 . LmxM.25.1480 163 VARRKGK|KY 0.132 . LmxM.25.1480 164 ARRKGKK|YV 0.343 . LmxM.25.1480 179 TSQSLIR|PG 0.153 . LmxM.25.1480 191 EPDSCLK|RP 0.055 . LmxM.25.1480 192 PDSCLKR|PE 0.164 . LmxM.25.1480 199 PETIAWR|RP 0.074 . LmxM.25.1480 200 ETIAWRR|PE 0.098 . LmxM.25.1480 207 PEDFLPK|KW 0.067 . LmxM.25.1480 208 EDFLPKK|WH 0.086 . LmxM.25.1480 212 PKKWHPK|IR 0.064 . LmxM.25.1480 214 KWHPKIR|LF 0.139 . LmxM.25.1480 222 FGNISPK|DI 0.125 . LmxM.25.1480 249 EHDTAIK|GI 0.065 . LmxM.25.1480 253 AIKGIFK|NH 0.056 . LmxM.25.1480 261 HHGCCIR|SQ 0.152 . LmxM.25.1480 266 IRSQEQK|HG 0.072 . LmxM.25.1480 271 QKHGAWR|VN 0.084 . LmxM.25.1480 281 NISGWWR|TI 0.089 . LmxM.25.1480 300 LLPVFAR|NR 0.077 . LmxM.25.1480 302 PVFARNR|NH 0.073 . LmxM.25.1480 315 WVSFSEK|AY 0.089 . LmxM.25.1480 319 SEKAYAK|AF 0.081 . LmxM.25.1480 352 HFGNMWR|TA 0.105 . LmxM.25.1480 359 TAQTDAK|TQ 0.070 . LmxM.25.1480 362 TDAKTQK|GL 0.115 . LmxM.25.1480 370 LFDSLHR|WN 0.080 . LmxM.25.1480 374 LHRWNEK|KY 0.065 . LmxM.25.1480 375 HRWNEKK|YL 0.129 . LmxM.25.1480 385 CISTPSK|GA 0.068 . LmxM.25.1480 389 PSKGALK|MA 0.088 . LmxM.25.1480 393 ALKMASK|QL 0.062 . LmxM.25.1480 406 CEALFEK|AG 0.064 . LmxM.25.1480 421 YSVLDVK|HF 0.057 . LmxM.25.1480 432 HHLCMLK|IR 0.061 . LmxM.25.1480 434 LCMLKIR|NP 0.090 . LmxM.25.1480 456 DSPLWNR|YP 0.082 . LmxM.25.1480 461 NRYPFIK|LA 0.073 . LmxM.25.1480 465 FIKLACR|PQ 0.079 . LmxM.25.1480 468 LACRPQK|KA 0.266 . LmxM.25.1480 469 ACRPQKK|AD 0.120 . LmxM.25.1480 479 IFWMEWR|DV 0.228 . LmxM.25.1480 483 EWRDVSK|FF 0.080 . LmxM.25.1480 493 SGSVCFR|RG 0.093 . LmxM.25.1480 494 GSVCFRR|GN 0.123 . LmxM.25.1480 499 RRGNWFR|SW 0.286 . LmxM.25.1480 505 RSWYDYR|VL 0.117 . LmxM.25.1480 525 LLIIVSK|TS 0.056 . LmxM.25.1480 538 YISLHQK|DC 0.075 . LmxM.25.1480 541 LHQKDCR|GL 0.132 . LmxM.25.1480 551 AGDPDSK|YA 0.066 . LmxM.25.1480 570 VNGSQQK|VV 0.068 . LmxM.25.1480 592 YLFQESR|SV 0.151 . LmxM.25.1480 599 SVSLYYK|FT 0.069 . LmxM.25.1480 602 LYYKFTK|AR 0.059 . LmxM.25.1480 604 YKFTKAR|KY 0.100 . LmxM.25.1480 605 KFTKARK|YL 0.077 . LmxM.25.1480 611 KYLVIPR|RM 0.071 . LmxM.25.1480 612 YLVIPRR|MK 0.159 . LmxM.25.1480 614 VIPRRMK|SS 0.166 . LmxM.25.1480 623 TGNNVPK|KK 0.074 . LmxM.25.1480 624 GNNVPKK|KY 0.162 . LmxM.25.1480 625 NNVPKKK|YV 0.246 . LmxM.25.1480 631 KYVIALR|TQ 0.071 . LmxM.25.1480 635 ALRTQTK|IS 0.068 . LmxM.25.1480 647 VVVNIVR|LD 0.065 . LmxM.25.1480 650 NIVRLDK|NN 0.088 . LmxM.25.1480 656 KNNAVFK|NV 0.083 . LmxM.25.1480 676 TTLYQIK|DG 0.077 . LmxM.25.1480 683 DGNNVFR|TY 0.089 . LmxM.25.1480 686 NVFRTYR|SD 0.194 . LmxM.25.1480 691 YRSDNLR|NG 0.109 . LmxM.25.1480 694 DNLRNGK|KQ 0.116 . LmxM.25.1480 695 NLRNGKK|QH 0.100 . ____________________________^_________________

  • Fasta :-

    >LmxM.25.1480 ATGGGCAACGGATGCTGCACCTGCTGTGATCCGAAGCCGGAGTACAAGCTCGGCAAGCCT CTTGTCTCCGGCAAAGCCACCCCGTGCTTCAATGATGGCCGCCTCTTCAAGATCGTCAAG GGCGATACCTGGTACTTCTACAACGACACGCAGGACTATCAGAAGGTGACAGCCGACTTT GGCAGTGGCTCTAACATCGTCGCGATGAGCGACACGGAACTCGTGCGCAAGAATGACTCC GGCGCCTGCACCGCGACCGTGTCCGTGTTCCCGCTCGAGACCAAGGCCATGGTGAAAGCC AAGGAGGTGAACGGCTTCAACGTAAAGTACTCCGGCATCCCCTTCACCGATGCGGACCGG CAGAAGCTACGTCAGAAGGCGGCGGTGCAGATCAGCGCCGACCTCGCCGAGATGCGCAAG CTGCGCGAGAAAAACCCGAAGGTCAACAACCAAAATCGGCTCCTGAAGGTGGCGCGGAGA AAGGGCAAGAAGTACGTTGACACGTCCTTTCCGCCGACCTCGCAGTCGCTGATCCGCCCT GGCATCGACTCCGAGCCGGATTCGTGCCTGAAGCGGCCGGAGACGATCGCATGGCGTCGC CCCGAAGACTTCCTGCCGAAGAAGTGGCACCCGAAAATTCGTCTCTTCGGCAACATCTCG CCCAAGGACATTAGCCAGGGTCAGCTCGGGGATTGCTACTACCTCTGCGCGCTTGCGGCG CTGGCTGAGCACGACACCGCCATCAAGGGGATCTTTAAGAACCACCACGGCTGCTGCATC CGCAGCCAGGAACAGAAGCATGGTGCGTGGCGCGTGAACCTGAACATCAGCGGGTGGTGG CGCACCATCATCATCGACTCGTACTTGCCCAGCGTGCAGCTGTTGCCGGTGTTCGCGCGC AACCGCAACCACCCGAACGAGCTGTGGGTGTCTTTCTCAGAGAAGGCCTACGCGAAGGCC TTCGGCTCGTACCAGGCGATCGTGGCTGGATACCCGTGGCAAGCCCTCGAGGACCTCACC GGCTTCCCGGCCTACCACTTCGGCAACATGTGGCGGACAGCGCAGACGGACGCCAAGACA CAGAAGGGGCTCTTCGACTCCCTCCACCGGTGGAACGAGAAGAAGTACTTGATCTGTATT TCCACCCCGTCGAAGGGCGCCCTGAAGATGGCGAGTAAGCAGCTCCCGGCAAACCACTGT GAGGCACTGTTTGAGAAGGCCGGCCTGAGCATCGGCCACGCGTACTCGGTGCTGGACGTG AAACACTTCCCACTGCACCACCTGTGCATGCTGAAGATCCGCAACCCGTGGGGGTCGCAT GTGGAGTGGACCGGGGACTGGGGCGATGACAGTCCGCTGTGGAACCGCTACCCATTCATC AAGCTCGCTTGCCGTCCTCAGAAGAAGGCGGATGGCATCTTCTGGATGGAGTGGCGCGAT GTGTCTAAGTTCTTCGACAGCGGCTCCGTGTGCTTCCGCCGTGGCAACTGGTTCCGTTCG TGGTATGACTACCGCGTCCTCGGCAGCTTTGAGGACCTTGTGTGCGACACCGCGCTGCTG ATCATCGTGAGCAAGACGTCGCAGTTTCCGGCGTACATCTCGCTGCACCAGAAGGACTGC CGCGGGCTGGCGGCCGGCGACCCGGACAGCAAGTACGCGTGCGTGATGATCAGCATATCA GAGGGCGACGTCAACGGCTCGCAGCAGAAGGTGGTAGCAAACTCCAGCGAGAACCCGGAG GAGCCGAGCACCGAATACCTCTTCCAGGAGTCTCGCTCTGTCTCCCTCTACTATAAGTTC ACAAAGGCCCGCAAGTACCTGGTCATTCCGCGTCGCATGAAAAGCAGCACCGGCAACAAC GTTCCAAAGAAGAAGTACGTCATCGCGCTCCGCACCCAGACCAAGATATCCAGCGAGGAC GTCGTCGTGAACATTGTGCGCCTTGACAAGAACAACGCGGTGTTCAAGAATGTGGCCTCG TTCGACGCTGGCACGCTGACGAGCCTCACCACGCTGTACCAGATCAAGGACGGCAACAAC GTCTTTCGCACCTACCGCAGCGACAACTTGCGCAATGGCAAGAAGCAGCACAACGCAGAG TTCGAGCTGGTGGTGTGA
  • Download Fasta

  • Fasta :-

    MGNGCCTCCDPKPEYKLGKPLVSGKATPCFNDGRLFKIVKGDTWYFYNDTQDYQKVTADF GSGSNIVAMSDTELVRKNDSGACTATVSVFPLETKAMVKAKEVNGFNVKYSGIPFTDADR QKLRQKAAVQISADLAEMRKLREKNPKVNNQNRLLKVARRKGKKYVDTSFPPTSQSLIRP GIDSEPDSCLKRPETIAWRRPEDFLPKKWHPKIRLFGNISPKDISQGQLGDCYYLCALAA LAEHDTAIKGIFKNHHGCCIRSQEQKHGAWRVNLNISGWWRTIIIDSYLPSVQLLPVFAR NRNHPNELWVSFSEKAYAKAFGSYQAIVAGYPWQALEDLTGFPAYHFGNMWRTAQTDAKT QKGLFDSLHRWNEKKYLICISTPSKGALKMASKQLPANHCEALFEKAGLSIGHAYSVLDV KHFPLHHLCMLKIRNPWGSHVEWTGDWGDDSPLWNRYPFIKLACRPQKKADGIFWMEWRD VSKFFDSGSVCFRRGNWFRSWYDYRVLGSFEDLVCDTALLIIVSKTSQFPAYISLHQKDC RGLAAGDPDSKYACVMISISEGDVNGSQQKVVANSSENPEEPSTEYLFQESRSVSLYYKF TKARKYLVIPRRMKSSTGNNVPKKKYVIALRTQTKISSEDVVVNIVRLDKNNAVFKNVAS FDAGTLTSLTTLYQIKDGNNVFRTYRSDNLRNGKKQHNAEFELVV

    No Results
  • title: catalytic site
  • coordinates: C232,H413,N435
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.25.1480500 SNWFRSWYDY0.991unspLmxM.25.1480500 SNWFRSWYDY0.991unspLmxM.25.1480500 SNWFRSWYDY0.991unspLmxM.25.1480575 SVVANSSENP0.995unspLmxM.25.1480637 SQTKISSEDV0.997unspLmxM.25.148023 SKPLVSGKAT0.993unspLmxM.25.1480220 SFGNISPKDI0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India