LmxM.25.2380 | glutathionylspermidine synthase, putative

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_IDPredictionOTHERSPmTPCS_Position
LmxM.25.2380OTHER0.9998020.0000750.000124
No Results

  • Fasta :-

    >LmxM.25.2380 MFPLPHDHHYHTHHRGTELVPFDQVIGVTPDGLPVISNGNEFHFSNLQSVTPSYQALCSF DRKAPVTVPYAKLGVKWQCVEFARRYLASRKAVWTALMPIAADMWSAETPFVHVQDGTPV EFTRTPNRSHGPAPAMSDIIVWGQSEETPFGHVAIVTEVLPEAVRVAEQNQGFERWAQGM LYSREILMQRSSAGTVELVDNDPVLGWVTLHCPYYDFCDGDLADKFRIVTGPGCIVRQPF PKHVELPWLQPEERCDFYLKRSLAIGGNVGDDARAEECDVPSAFYFLDYDIWCRLGRAAH SLHRIAMAATAKVLDDADSAYLLEHYFGVPPEIHPLLRRSWEMMPPMCGRFDFGYDGNKV AMLEYNCDSSGALLECCNTQEKMAIYYGVSQGMSTGSFLGAKCLSHFARLMSNEKVCPKH KLIHFMIDDDDEERYTAMCMMNFAEKAGFHTKLCVKLIDFRYRDGAPANAAPLSVPCDYP IIVDSDGDEVLMVWKTWSWDTVLRQYHRQRSATDSISGPTLSDILLNNNICVIEPLWKAV TGSKAILPFMHALAPDHEHILAADFVPTKDIISHHYISKPINGRAGQNIMMFDPVTDASE LNAAPQGMLSESSSQLFSNRSLAASCSALQSQSIDRTNECSAGTFFASAVVYQKRFFLKK FEGKYFPIFCGWMTDDEFGGVVVREDTSKITKLDSIVIPARVVRENVSLGVAYADEGET
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/154 Sequence name : 154 Sequence length : 719 VALUES OF COMPUTED PARAMETERS Coef20 : 2.525 CoefTot : -0.623 ChDiff : -25 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.241 1.094 0.045 0.478 MesoH : -0.413 0.300 -0.355 0.258 MuHd_075 : 6.799 3.120 2.591 1.331 MuHd_095 : 29.885 11.045 6.285 4.233 MuHd_100 : 25.575 8.373 5.250 3.554 MuHd_105 : 15.788 2.431 3.655 2.224 Hmax_075 : -4.112 -6.125 -4.522 0.455 Hmax_095 : 3.763 -3.400 -3.738 1.490 Hmax_100 : 3.100 -4.400 -4.189 1.590 Hmax_105 : -0.350 -7.350 -5.046 1.108 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9907 0.0093 DFMC : 0.9706 0.0294
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 719 LmxM.25.2380 MFPLPHDHHYHTHHRGTELVPFDQVIGVTPDGLPVISNGNEFHFSNLQSVTPSYQALCSFDRKAPVTVPYAKLGVKWQCV 80 EFARRYLASRKAVWTALMPIAADMWSAETPFVHVQDGTPVEFTRTPNRSHGPAPAMSDIIVWGQSEETPFGHVAIVTEVL 160 PEAVRVAEQNQGFERWAQGMLYSREILMQRSSAGTVELVDNDPVLGWVTLHCPYYDFCDGDLADKFRIVTGPGCIVRQPF 240 PKHVELPWLQPEERCDFYLKRSLAIGGNVGDDARAEECDVPSAFYFLDYDIWCRLGRAAHSLHRIAMAATAKVLDDADSA 320 YLLEHYFGVPPEIHPLLRRSWEMMPPMCGRFDFGYDGNKVAMLEYNCDSSGALLECCNTQEKMAIYYGVSQGMSTGSFLG 400 AKCLSHFARLMSNEKVCPKHKLIHFMIDDDDEERYTAMCMMNFAEKAGFHTKLCVKLIDFRYRDGAPANAAPLSVPCDYP 480 IIVDSDGDEVLMVWKTWSWDTVLRQYHRQRSATDSISGPTLSDILLNNNICVIEPLWKAVTGSKAILPFMHALAPDHEHI 560 LAADFVPTKDIISHHYISKPINGRAGQNIMMFDPVTDASELNAAPQGMLSESSSQLFSNRSLAASCSALQSQSIDRTNEC 640 SAGTFFASAVVYQKRFFLKKFEGKYFPIFCGWMTDDEFGGVVVREDTSKITKLDSIVIPARVVRENVSLGVAYADEGET 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >LmxM.25.2380 ATGTTTCCTCTGCCACACGATCACCACTACCACACGCACCACCGCGGCACTGAGCTGGTG CCCTTTGATCAGGTCATCGGTGTCACCCCAGATGGCCTGCCCGTCATATCCAACGGGAAC GAGTTCCACTTCAGCAACCTCCAGTCTGTGACGCCTTCCTATCAGGCGCTCTGCTCCTTC GACCGCAAGGCGCCGGTAACTGTGCCGTACGCGAAGCTTGGTGTCAAATGGCAGTGCGTT GAGTTTGCACGCCGCTACCTCGCATCCCGCAAGGCTGTGTGGACGGCGCTCATGCCGATC GCCGCGGACATGTGGAGCGCAGAGACGCCGTTCGTGCACGTGCAGGATGGCACACCGGTG GAGTTCACGCGGACCCCCAACAGATCACACGGCCCGGCGCCGGCGATGTCGGATATCATC GTTTGGGGTCAGAGCGAGGAGACACCGTTTGGCCACGTCGCGATTGTGACGGAGGTGCTG CCGGAGGCGGTGCGGGTAGCGGAGCAGAACCAGGGCTTTGAGCGGTGGGCGCAGGGCATG CTGTACAGCCGGGAGATTCTAATGCAGCGCAGCAGCGCAGGCACAGTAGAGCTTGTAGAC AACGACCCGGTGCTGGGGTGGGTGACGCTGCACTGCCCCTACTACGACTTTTGCGATGGT GATCTGGCCGACAAGTTCCGCATTGTCACCGGACCGGGCTGCATTGTGCGCCAGCCCTTC CCCAAACACGTGGAGTTGCCGTGGCTGCAACCAGAGGAGCGGTGCGACTTTTATCTGAAG CGCTCCCTTGCGATTGGCGGCAACGTCGGCGACGATGCGAGGGCGGAGGAGTGTGACGTG CCCAGCGCTTTTTACTTTCTCGACTATGACATCTGGTGCCGGCTCGGGCGTGCGGCTCAC TCGCTGCACCGCATCGCCATGGCTGCCACAGCCAAGGTCCTCGACGATGCGGACTCGGCG TATCTCTTGGAGCACTACTTTGGGGTACCCCCAGAGATTCATCCGCTGCTGCGTCGCTCC TGGGAGATGATGCCGCCAATGTGTGGCCGCTTTGACTTCGGCTACGACGGCAACAAGGTG GCGATGCTGGAGTACAACTGCGACTCCTCTGGCGCGCTGCTGGAGTGCTGCAACACCCAA GAGAAGATGGCCATCTACTACGGCGTGTCGCAGGGGATGTCGACCGGCTCCTTCTTGGGG GCCAAGTGCTTGTCACACTTTGCGCGCCTGATGTCAAACGAGAAGGTGTGCCCCAAGCAC AAGCTGATCCACTTCATGATTGACGACGACGACGAGGAGCGCTACACCGCCATGTGCATG ATGAACTTTGCAGAGAAAGCCGGTTTCCACACGAAGCTTTGCGTGAAGCTCATCGACTTC CGTTACCGCGACGGCGCTCCTGCCAACGCCGCCCCGCTCTCCGTGCCATGCGACTACCCT ATCATAGTTGACAGTGACGGCGACGAGGTTCTTATGGTGTGGAAGACGTGGTCGTGGGAC ACGGTGTTGAGACAATATCACCGCCAGCGCAGTGCAACAGACTCGATAAGCGGTCCGACG CTCTCTGACATTCTCCTCAACAACAACATTTGCGTCATCGAGCCGCTCTGGAAAGCTGTG ACAGGGAGCAAGGCGATTCTCCCCTTTATGCACGCTCTGGCTCCTGACCACGAGCACATC CTCGCGGCGGACTTTGTGCCCACAAAAGACATCATCTCCCACCACTACATCTCCAAGCCC ATTAACGGTCGAGCTGGGCAGAACATCATGATGTTTGACCCTGTGACCGACGCGTCGGAG CTGAACGCGGCTCCTCAAGGGATGCTCAGTGAGAGCTCGTCGCAGCTCTTCTCCAACAGG TCGCTGGCCGCCTCCTGCTCTGCGCTACAGAGCCAGTCGATAGACCGCACCAATGAGTGC TCGGCCGGCACCTTTTTCGCCTCCGCCGTCGTCTATCAGAAGCGTTTCTTCTTGAAGAAA TTTGAAGGCAAGTACTTCCCCATTTTCTGTGGCTGGATGACTGACGACGAATTTGGTGGT GTCGTCGTCCGCGAAGACACATCAAAGATCACGAAGCTGGATAGCATCGTCATCCCCGCG CGCGTTGTGCGCGAGAACGTCTCTCTCGGTGTGGCGTACGCTGACGAAGGTGAGACGTAG
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  • Fasta :-

    MFPLPHDHHYHTHHRGTELVPFDQVIGVTPDGLPVISNGNEFHFSNLQSVTPSYQALCSF DRKAPVTVPYAKLGVKWQCVEFARRYLASRKAVWTALMPIAADMWSAETPFVHVQDGTPV EFTRTPNRSHGPAPAMSDIIVWGQSEETPFGHVAIVTEVLPEAVRVAEQNQGFERWAQGM LYSREILMQRSSAGTVELVDNDPVLGWVTLHCPYYDFCDGDLADKFRIVTGPGCIVRQPF PKHVELPWLQPEERCDFYLKRSLAIGGNVGDDARAEECDVPSAFYFLDYDIWCRLGRAAH SLHRIAMAATAKVLDDADSAYLLEHYFGVPPEIHPLLRRSWEMMPPMCGRFDFGYDGNKV AMLEYNCDSSGALLECCNTQEKMAIYYGVSQGMSTGSFLGAKCLSHFARLMSNEKVCPKH KLIHFMIDDDDEERYTAMCMMNFAEKAGFHTKLCVKLIDFRYRDGAPANAAPLSVPCDYP IIVDSDGDEVLMVWKTWSWDTVLRQYHRQRSATDSISGPTLSDILLNNNICVIEPLWKAV TGSKAILPFMHALAPDHEHILAADFVPTKDIISHHYISKPINGRAGQNIMMFDPVTDASE LNAAPQGMLSESSSQLFSNRSLAASCSALQSQSIDRTNECSAGTFFASAVVYQKRFFLKK FEGKYFPIFCGWMTDDEFGGVVVREDTSKITKLDSIVIPARVVRENVSLGVAYADEGET

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.25.2380687 TVREDTSKIT0.995unspLmxM.25.2380687 TVREDTSKIT0.995unspLmxM.25.2380687 TVREDTSKIT0.995unspLmxM.25.2380340 SLLRRSWEMM0.996unspLmxM.25.2380511 SHRQRSATDS0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India