LmxM.26.0300 | metallo-peptidase, Clan MA(E), Family M1

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008237      GO:0008270      

  • Computed_GO_Functions:  metallopeptidase activity      zinc ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.26.0300OTHER0.9860840.0030290.010888
No Results

  • Fasta :-

    >LmxM.26.0300 MAAARHVLPSSVRPTHYHIALCPDLDHATFSAEVVIDVHITEPTSTFVLNAVGLTFSDVS VRAIVGDGGNDAPRTVQSITESTADQRISVQVDRPVTDAAQLRFRYTAAIGDNLFAFYRS QYTYEGVTSYVGATQMCPAEARRVFPCWDEPAAKATFALDITVPAKLQVWSNDVPRKVVQ LPDGLARWEFRPVIAMSTYVVAWVIGELETTEVVVPRSAAAVAGQGGELASSSPVVIRAV TPRGKIEQARFALTVAARVLPLYEECFQFPYVFPKLDLITLPNFAFGAMENWGCITFREQ TLLASEEASAMQKERVAMVVAHELAHQWFGNLATMAWWSDLWLNESFATYMATWAVNKIF PEWLVDTQFVHDEGSRAYQLDAMRSSHPIELPVRDVREVDSIFDAISYSKGAMVLRMAAK FVGEEGFQRGLVDYLSRYAYASATSLQLWEALSGPAAPNLKEVLQSWTREQGYPYVQAAH DAATGTLALTQRRFFAVSDVTADEDAPLWRIPMVYTYGTADGAVKTQSVVLAAATMSVPI DGAVWVKVNSDQIAFCRVQYTAEMLRGLVGPLTAKAINSTDRYSILADYAAFARGGYCDT VQVIDLLSHYHNEDDYTVWCEVAQFEKDLRSILACSSPEVHAAFNDFCNRLYSPAMRRVG LQPRRGDGHRTQQARLLIFSRLLSCSNVQATAMARDLYDKRTTSVISPDMLGYVYAVHIN THGAAAMAEVQELIAKTTYAEERAQYLGALAAVAEPSIDVPKLMDYLLSDAVNSQDMFTV MLGLAEGAQTQAFFVQQLMDKWPRLVQKAPSVLLARMLKLIEHSSDEALIAPLRRFFDGM PEEMQSRTRMSFEQGVEGLLCNAAWAARDGARIGDYLLHKGTHLKID
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/332 Sequence name : 332 Sequence length : 887 VALUES OF COMPUTED PARAMETERS Coef20 : 4.079 CoefTot : -0.331 ChDiff : -22 ZoneTo : 23 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.271 1.553 0.163 0.640 MesoH : -0.201 0.624 -0.240 0.264 MuHd_075 : 15.274 15.475 3.997 4.991 MuHd_095 : 32.997 24.115 8.778 7.401 MuHd_100 : 25.584 16.662 8.107 5.091 MuHd_105 : 20.782 15.295 7.034 3.980 Hmax_075 : 7.500 11.300 1.919 4.400 Hmax_095 : 14.088 16.450 4.640 4.996 Hmax_100 : 9.300 11.900 1.730 3.590 Hmax_105 : 13.417 14.817 4.185 4.620 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3541 0.6459 DFMC : 0.5644 0.4356
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 887 LmxM.26.0300 MAAARHVLPSSVRPTHYHIALCPDLDHATFSAEVVIDVHITEPTSTFVLNAVGLTFSDVSVRAIVGDGGNDAPRTVQSIT 80 ESTADQRISVQVDRPVTDAAQLRFRYTAAIGDNLFAFYRSQYTYEGVTSYVGATQMCPAEARRVFPCWDEPAAKATFALD 160 ITVPAKLQVWSNDVPRKVVQLPDGLARWEFRPVIAMSTYVVAWVIGELETTEVVVPRSAAAVAGQGGELASSSPVVIRAV 240 TPRGKIEQARFALTVAARVLPLYEECFQFPYVFPKLDLITLPNFAFGAMENWGCITFREQTLLASEEASAMQKERVAMVV 320 AHELAHQWFGNLATMAWWSDLWLNESFATYMATWAVNKIFPEWLVDTQFVHDEGSRAYQLDAMRSSHPIELPVRDVREVD 400 SIFDAISYSKGAMVLRMAAKFVGEEGFQRGLVDYLSRYAYASATSLQLWEALSGPAAPNLKEVLQSWTREQGYPYVQAAH 480 DAATGTLALTQRRFFAVSDVTADEDAPLWRIPMVYTYGTADGAVKTQSVVLAAATMSVPIDGAVWVKVNSDQIAFCRVQY 560 TAEMLRGLVGPLTAKAINSTDRYSILADYAAFARGGYCDTVQVIDLLSHYHNEDDYTVWCEVAQFEKDLRSILACSSPEV 640 HAAFNDFCNRLYSPAMRRVGLQPRRGDGHRTQQARLLIFSRLLSCSNVQATAMARDLYDKRTTSVISPDMLGYVYAVHIN 720 THGAAAMAEVQELIAKTTYAEERAQYLGALAAVAEPSIDVPKLMDYLLSDAVNSQDMFTVMLGLAEGAQTQAFFVQQLMD 800 KWPRLVQKAPSVLLARMLKLIEHSSDEALIAPLRRFFDGMPEEMQSRTRMSFEQGVEGLLCNAAWAARDGARIGDYLLHK 880 GTHLKID 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ....... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.26.0300 5 --MAAAR|HV 0.123 . LmxM.26.0300 13 VLPSSVR|PT 0.082 . LmxM.26.0300 62 FSDVSVR|AI 0.090 . LmxM.26.0300 74 GGNDAPR|TV 0.133 . LmxM.26.0300 87 ESTADQR|IS 0.077 . LmxM.26.0300 94 ISVQVDR|PV 0.131 . LmxM.26.0300 103 TDAAQLR|FR 0.105 . LmxM.26.0300 105 AAQLRFR|YT 0.132 . LmxM.26.0300 119 NLFAFYR|SQ 0.145 . LmxM.26.0300 142 MCPAEAR|RV 0.121 . LmxM.26.0300 143 CPAEARR|VF 0.101 . LmxM.26.0300 154 WDEPAAK|AT 0.075 . LmxM.26.0300 166 DITVPAK|LQ 0.060 . LmxM.26.0300 176 WSNDVPR|KV 0.165 . LmxM.26.0300 177 SNDVPRK|VV 0.088 . LmxM.26.0300 187 LPDGLAR|WE 0.086 . LmxM.26.0300 191 LARWEFR|PV 0.145 . LmxM.26.0300 217 TEVVVPR|SA 0.274 . LmxM.26.0300 238 SSPVVIR|AV 0.180 . LmxM.26.0300 243 IRAVTPR|GK 0.179 . LmxM.26.0300 245 AVTPRGK|IE 0.056 . LmxM.26.0300 250 GKIEQAR|FA 0.168 . LmxM.26.0300 258 ALTVAAR|VL 0.085 . LmxM.26.0300 275 FPYVFPK|LD 0.069 . LmxM.26.0300 298 WGCITFR|EQ 0.077 . LmxM.26.0300 313 EASAMQK|ER 0.064 . LmxM.26.0300 315 SAMQKER|VA 0.150 . LmxM.26.0300 358 ATWAVNK|IF 0.060 . LmxM.26.0300 376 VHDEGSR|AY 0.064 . LmxM.26.0300 384 YQLDAMR|SS 0.125 . LmxM.26.0300 394 PIELPVR|DV 0.130 . LmxM.26.0300 397 LPVRDVR|EV 0.479 . LmxM.26.0300 410 DAISYSK|GA 0.068 . LmxM.26.0300 416 KGAMVLR|MA 0.122 . LmxM.26.0300 420 VLRMAAK|FV 0.147 . LmxM.26.0300 429 GEEGFQR|GL 0.098 . LmxM.26.0300 437 LVDYLSR|YA 0.106 . LmxM.26.0300 461 PAAPNLK|EV 0.070 . LmxM.26.0300 469 VLQSWTR|EQ 0.076 . LmxM.26.0300 492 TLALTQR|RF 0.095 . LmxM.26.0300 493 LALTQRR|FF 0.134 . LmxM.26.0300 510 EDAPLWR|IP 0.085 . LmxM.26.0300 525 TADGAVK|TQ 0.067 . LmxM.26.0300 547 DGAVWVK|VN 0.070 . LmxM.26.0300 557 DQIAFCR|VQ 0.090 . LmxM.26.0300 566 YTAEMLR|GL 0.082 . LmxM.26.0300 575 VGPLTAK|AI 0.061 . LmxM.26.0300 582 AINSTDR|YS 0.094 . LmxM.26.0300 594 DYAAFAR|GG 0.088 . LmxM.26.0300 627 EVAQFEK|DL 0.076 . LmxM.26.0300 630 QFEKDLR|SI 0.094 . LmxM.26.0300 650 FNDFCNR|LY 0.093 . LmxM.26.0300 657 LYSPAMR|RV 0.152 . LmxM.26.0300 658 YSPAMRR|VG 0.089 . LmxM.26.0300 664 RVGLQPR|RG 0.094 . LmxM.26.0300 665 VGLQPRR|GD 0.127 . LmxM.26.0300 670 RRGDGHR|TQ 0.092 . LmxM.26.0300 675 HRTQQAR|LL 0.109 . LmxM.26.0300 681 RLLIFSR|LL 0.090 . LmxM.26.0300 695 QATAMAR|DL 0.139 . LmxM.26.0300 700 ARDLYDK|RT 0.060 . LmxM.26.0300 701 RDLYDKR|TT 0.184 . LmxM.26.0300 736 VQELIAK|TT 0.071 . LmxM.26.0300 743 TTYAEER|AQ 0.091 . LmxM.26.0300 762 PSIDVPK|LM 0.066 . LmxM.26.0300 801 VQQLMDK|WP 0.062 . LmxM.26.0300 804 LMDKWPR|LV 0.120 . LmxM.26.0300 808 WPRLVQK|AP 0.081 . LmxM.26.0300 816 PSVLLAR|ML 0.113 . LmxM.26.0300 819 LLARMLK|LI 0.136 . LmxM.26.0300 834 ALIAPLR|RF 0.093 . LmxM.26.0300 835 LIAPLRR|FF 0.210 . LmxM.26.0300 847 PEEMQSR|TR 0.079 . LmxM.26.0300 849 EMQSRTR|MS 0.102 . LmxM.26.0300 868 NAAWAAR|DG 0.116 . LmxM.26.0300 872 AARDGAR|IG 0.098 . LmxM.26.0300 880 GDYLLHK|GT 0.070 . LmxM.26.0300 885 HKGTHLK|ID 0.067 . ____________________________^_________________

  • Fasta :-

    >LmxM.26.0300 ATGGCCGCCGCTCGCCACGTTCTACCGAGCAGTGTCCGACCGACGCACTACCACATTGCC CTCTGTCCAGATCTCGATCACGCCACCTTCTCAGCTGAGGTGGTCATCGACGTGCATATC ACTGAGCCCACAAGCACCTTCGTGCTGAATGCAGTGGGACTAACGTTTTCTGATGTTTCA GTGCGCGCTATCGTCGGCGATGGCGGCAACGATGCTCCACGGACTGTGCAGAGCATCACG GAGTCGACGGCGGACCAGCGCATATCTGTGCAGGTCGATCGGCCAGTAACTGATGCCGCT CAGCTGCGGTTTCGCTACACGGCGGCCATCGGCGACAATCTCTTCGCTTTCTACCGTAGC CAGTATACGTACGAAGGCGTCACGTCGTATGTGGGGGCGACACAGATGTGCCCAGCGGAG GCGCGCCGTGTCTTCCCCTGCTGGGATGAGCCTGCTGCCAAAGCTACATTTGCCCTCGAC ATAACCGTCCCTGCGAAGCTGCAGGTGTGGAGCAACGACGTACCGCGCAAGGTGGTGCAG CTGCCGGACGGGCTTGCGCGCTGGGAATTCCGCCCTGTCATAGCCATGTCCACCTACGTC GTCGCCTGGGTGATTGGGGAGCTAGAGACGACGGAGGTGGTGGTGCCACGGAGCGCTGCC GCAGTGGCTGGTCAGGGTGGTGAACTGGCATCGTCCTCCCCCGTCGTCATCCGTGCCGTT ACCCCACGCGGCAAGATTGAGCAAGCACGATTCGCGCTGACGGTGGCCGCGCGAGTGCTG CCGCTCTACGAGGAGTGCTTCCAGTTTCCGTACGTCTTTCCAAAGCTTGACCTCATCACA TTGCCCAACTTTGCCTTTGGGGCTATGGAGAACTGGGGCTGCATCACGTTCCGCGAGCAG ACACTACTGGCCTCGGAGGAGGCGAGCGCCATGCAGAAAGAGCGGGTCGCGATGGTGGTG GCGCACGAGCTGGCCCATCAGTGGTTCGGCAACTTGGCGACCATGGCCTGGTGGTCGGAC CTGTGGCTGAACGAGTCCTTCGCCACCTACATGGCCACCTGGGCGGTGAACAAGATCTTT CCCGAGTGGCTGGTGGACACTCAGTTCGTGCACGACGAGGGAAGCCGGGCATACCAGCTG GACGCCATGCGCTCCTCGCACCCCATCGAGTTGCCGGTGCGGGATGTGCGAGAGGTGGAC AGCATTTTCGATGCCATCAGCTACTCCAAGGGAGCCATGGTGCTGCGCATGGCGGCCAAG TTCGTTGGCGAGGAAGGATTTCAGCGCGGGCTGGTCGACTATCTCTCCCGCTACGCCTAC GCGTCGGCTACATCGCTACAGCTGTGGGAGGCCCTCTCCGGCCCTGCCGCGCCGAATTTG AAAGAGGTTCTTCAAAGCTGGACGAGGGAGCAGGGATACCCGTATGTGCAGGCCGCACAC GACGCAGCAACCGGTACGCTGGCGCTGACGCAGCGGCGCTTCTTCGCCGTGAGCGATGTG ACGGCAGACGAGGACGCGCCACTGTGGAGGATTCCCATGGTTTACACATACGGGACCGCG GATGGGGCGGTCAAGACTCAGTCCGTCGTGCTTGCCGCCGCCACCATGTCCGTCCCGATT GACGGCGCGGTGTGGGTGAAGGTGAACTCGGACCAGATCGCTTTCTGCCGTGTGCAGTAT ACGGCAGAGATGCTGCGCGGGCTCGTGGGCCCGCTTACGGCGAAGGCCATCAATTCCACG GACCGCTACTCCATCCTCGCAGACTACGCGGCCTTCGCGCGCGGAGGCTACTGCGACACG GTGCAGGTCATCGATCTTCTCTCCCATTACCACAACGAGGACGACTACACGGTGTGGTGC GAGGTGGCCCAGTTCGAGAAGGACCTGCGCAGCATCCTCGCCTGCAGTTCACCGGAAGTG CACGCCGCTTTCAACGACTTCTGCAATCGTCTCTACTCCCCGGCGATGCGGCGGGTCGGG TTGCAGCCGCGCCGGGGAGACGGTCACCGCACCCAGCAAGCGCGCCTACTAATCTTCTCT CGACTGCTCTCGTGCAGCAACGTCCAGGCCACGGCGATGGCACGTGACCTGTACGACAAG CGCACCACGAGCGTCATTTCGCCTGACATGCTAGGTTACGTGTACGCTGTACATATCAAC ACCCACGGCGCGGCGGCGATGGCAGAGGTGCAGGAGCTCATTGCCAAAACCACATACGCG GAGGAACGGGCGCAGTACCTTGGCGCACTCGCGGCGGTGGCGGAGCCGTCCATTGACGTG CCGAAGCTGATGGACTATCTTCTGTCGGACGCGGTGAACAGCCAGGACATGTTCACGGTG ATGCTGGGCTTGGCGGAGGGTGCACAGACACAGGCCTTCTTCGTTCAGCAGCTAATGGAC AAGTGGCCGCGCCTGGTCCAAAAGGCGCCGTCCGTGCTGCTGGCAAGGATGCTGAAGCTG ATTGAGCACAGCAGCGACGAGGCGCTGATAGCACCACTGCGCCGCTTCTTCGACGGCATG CCTGAAGAAATGCAGTCTCGCACTCGAATGTCTTTCGAGCAGGGCGTGGAGGGTCTCCTG TGCAATGCGGCGTGGGCCGCTCGCGATGGCGCCCGCATTGGCGACTATCTACTGCACAAG GGAACCCACTTAAAGATAGACTAG
  • Download Fasta

  • Fasta :-

    MAAARHVLPSSVRPTHYHIALCPDLDHATFSAEVVIDVHITEPTSTFVLNAVGLTFSDVS VRAIVGDGGNDAPRTVQSITESTADQRISVQVDRPVTDAAQLRFRYTAAIGDNLFAFYRS QYTYEGVTSYVGATQMCPAEARRVFPCWDEPAAKATFALDITVPAKLQVWSNDVPRKVVQ LPDGLARWEFRPVIAMSTYVVAWVIGELETTEVVVPRSAAAVAGQGGELASSSPVVIRAV TPRGKIEQARFALTVAARVLPLYEECFQFPYVFPKLDLITLPNFAFGAMENWGCITFREQ TLLASEEASAMQKERVAMVVAHELAHQWFGNLATMAWWSDLWLNESFATYMATWAVNKIF PEWLVDTQFVHDEGSRAYQLDAMRSSHPIELPVRDVREVDSIFDAISYSKGAMVLRMAAK FVGEEGFQRGLVDYLSRYAYASATSLQLWEALSGPAAPNLKEVLQSWTREQGYPYVQAAH DAATGTLALTQRRFFAVSDVTADEDAPLWRIPMVYTYGTADGAVKTQSVVLAAATMSVPI DGAVWVKVNSDQIAFCRVQYTAEMLRGLVGPLTAKAINSTDRYSILADYAAFARGGYCDT VQVIDLLSHYHNEDDYTVWCEVAQFEKDLRSILACSSPEVHAAFNDFCNRLYSPAMRRVG LQPRRGDGHRTQQARLLIFSRLLSCSNVQATAMARDLYDKRTTSVISPDMLGYVYAVHIN THGAAAMAEVQELIAKTTYAEERAQYLGALAAVAEPSIDVPKLMDYLLSDAVNSQDMFTV MLGLAEGAQTQAFFVQQLMDKWPRLVQKAPSVLLARMLKLIEHSSDEALIAPLRRFFDGM PEEMQSRTRMSFEQGVEGLLCNAAWAARDGARIGDYLLHKGTHLKID

  • title: Zn binding site
  • coordinates: H322,H326,E345
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.26.0300851 SRTRMSFEQG0.997unspLmxM.26.0300851 SRTRMSFEQG0.997unspLmxM.26.0300851 SRTRMSFEQG0.997unspLmxM.26.0300241 TIRAVTPRGK0.993unspLmxM.26.0300704 SKRTTSVISP0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India