LmxM.26.2420 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.26.2420OTHER0.9993390.0006240.000037
No Results

  • Fasta :-

    >LmxM.26.2420 MESVEAVELFSECSARYRYRVPVSVIRELQYEGSRYSAEFNVGGWFWRFHIQERSAEGQR FLALHLQSCTPGAVSVHFKLTAVCMRDPLQSRSKTFNCTFKKAGSAWGLHQFIAIEQLLH PERGFVYTVQETGTRCVDFEAVLQVDNGSGNGRAPPVRSATRSVTPTRSIVGAGVAGTNG GQISPSRGPSVRPVGVRGGGTPVGRSGRTSYSPGRVGTSALVPMEGSVDRPGASAGAALR RGFYSDPNGGQLITLDNASIIGGDGGGRPPGSAVVRAPLTYPFAHLEILCDMSFDVQGVR VKAHRCVIGARMQPLLPEQMLPLQVGCIVAIAVPLDVFTTFLRYVYTEEYPESGVLPPES LLDLYLLAAACEFYDLSAVCIRYVRPLLTPENILPIVLTRYNAADEVLTSLYLHVLLDNY DILIQDRQFEEIPGHLFRRLSLILYSKETVPNAPIPPMKNTLGKQIAWLAESGEYSDYEW VVGPQQYAVHAHRYILACRCVLFSQAMNPRSPGPLPSFTTNEFDFSLRSWQKLLMGMYRR HLDTARDFSAEDIAIIFKMQQVLIMDGQLKREADEAFSNTNALRLLIYAVKHQIPELHER AISYVARNFSVMIRNDSQAWELISELPQTAVVSLFRTVTEQPPL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/372 Sequence name : 372 Sequence length : 644 VALUES OF COMPUTED PARAMETERS Coef20 : 4.329 CoefTot : 0.000 ChDiff : 0 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.541 2.024 0.346 0.696 MesoH : -0.061 0.840 -0.125 0.370 MuHd_075 : 24.222 12.760 5.513 3.999 MuHd_095 : 18.948 5.785 4.828 1.755 MuHd_100 : 28.644 10.635 7.919 3.294 MuHd_105 : 37.940 16.353 10.710 5.078 Hmax_075 : 4.550 9.683 -0.610 3.617 Hmax_095 : -0.875 3.937 -1.246 2.301 Hmax_100 : 10.400 8.400 2.597 3.110 Hmax_105 : 11.433 10.733 3.169 3.850 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9209 0.0791 DFMC : 0.9090 0.0910
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 644 LmxM.26.2420 MESVEAVELFSECSARYRYRVPVSVIRELQYEGSRYSAEFNVGGWFWRFHIQERSAEGQRFLALHLQSCTPGAVSVHFKL 80 TAVCMRDPLQSRSKTFNCTFKKAGSAWGLHQFIAIEQLLHPERGFVYTVQETGTRCVDFEAVLQVDNGSGNGRAPPVRSA 160 TRSVTPTRSIVGAGVAGTNGGQISPSRGPSVRPVGVRGGGTPVGRSGRTSYSPGRVGTSALVPMEGSVDRPGASAGAALR 240 RGFYSDPNGGQLITLDNASIIGGDGGGRPPGSAVVRAPLTYPFAHLEILCDMSFDVQGVRVKAHRCVIGARMQPLLPEQM 320 LPLQVGCIVAIAVPLDVFTTFLRYVYTEEYPESGVLPPESLLDLYLLAAACEFYDLSAVCIRYVRPLLTPENILPIVLTR 400 YNAADEVLTSLYLHVLLDNYDILIQDRQFEEIPGHLFRRLSLILYSKETVPNAPIPPMKNTLGKQIAWLAESGEYSDYEW 480 VVGPQQYAVHAHRYILACRCVLFSQAMNPRSPGPLPSFTTNEFDFSLRSWQKLLMGMYRRHLDTARDFSAEDIAIIFKMQ 560 QVLIMDGQLKREADEAFSNTNALRLLIYAVKHQIPELHERAISYVARNFSVMIRNDSQAWELISELPQTAVVSLFRTVTE 640 QPPL 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.26.2420 16 FSECSAR|YR 0.117 . LmxM.26.2420 18 ECSARYR|YR 0.091 . LmxM.26.2420 20 SARYRYR|VP 0.095 . LmxM.26.2420 27 VPVSVIR|EL 0.088 . LmxM.26.2420 35 LQYEGSR|YS 0.075 . LmxM.26.2420 48 VGGWFWR|FH 0.128 . LmxM.26.2420 54 RFHIQER|SA 0.305 . LmxM.26.2420 60 RSAEGQR|FL 0.091 . LmxM.26.2420 79 AVSVHFK|LT 0.086 . LmxM.26.2420 86 LTAVCMR|DP 0.112 . LmxM.26.2420 92 RDPLQSR|SK 0.093 . LmxM.26.2420 94 PLQSRSK|TF 0.059 . LmxM.26.2420 101 TFNCTFK|KA 0.089 . LmxM.26.2420 102 FNCTFKK|AG 0.117 . LmxM.26.2420 123 QLLHPER|GF 0.076 . LmxM.26.2420 135 VQETGTR|CV 0.087 . LmxM.26.2420 153 NGSGNGR|AP 0.080 . LmxM.26.2420 158 GRAPPVR|SA 0.256 . LmxM.26.2420 162 PVRSATR|SV 0.192 . LmxM.26.2420 168 RSVTPTR|SI 0.175 . LmxM.26.2420 187 GQISPSR|GP 0.098 . LmxM.26.2420 192 SRGPSVR|PV 0.232 . LmxM.26.2420 197 VRPVGVR|GG 0.102 . LmxM.26.2420 205 GGTPVGR|SG 0.115 . LmxM.26.2420 208 PVGRSGR|TS 0.217 . LmxM.26.2420 215 TSYSPGR|VG 0.087 . LmxM.26.2420 230 MEGSVDR|PG 0.089 . LmxM.26.2420 240 SAGAALR|RG 0.075 . LmxM.26.2420 241 AGAALRR|GF 0.138 . LmxM.26.2420 268 GGDGGGR|PP 0.079 . LmxM.26.2420 276 PGSAVVR|AP 0.104 . LmxM.26.2420 300 FDVQGVR|VK 0.060 . LmxM.26.2420 302 VQGVRVK|AH 0.066 . LmxM.26.2420 305 VRVKAHR|CV 0.186 . LmxM.26.2420 311 RCVIGAR|MQ 0.081 . LmxM.26.2420 343 VFTTFLR|YV 0.114 . LmxM.26.2420 382 LSAVCIR|YV 0.175 . LmxM.26.2420 385 VCIRYVR|PL 0.159 . LmxM.26.2420 400 LPIVLTR|YN 0.107 . LmxM.26.2420 427 DILIQDR|QF 0.095 . LmxM.26.2420 438 IPGHLFR|RL 0.124 . LmxM.26.2420 439 PGHLFRR|LS 0.108 . LmxM.26.2420 447 SLILYSK|ET 0.058 . LmxM.26.2420 459 APIPPMK|NT 0.074 . LmxM.26.2420 464 MKNTLGK|QI 0.083 . LmxM.26.2420 493 YAVHAHR|YI 0.112 . LmxM.26.2420 499 RYILACR|CV 0.104 . LmxM.26.2420 510 SQAMNPR|SP 0.180 . LmxM.26.2420 528 EFDFSLR|SW 0.133 . LmxM.26.2420 532 SLRSWQK|LL 0.067 . LmxM.26.2420 539 LLMGMYR|RH 0.080 . LmxM.26.2420 540 LMGMYRR|HL 0.239 . LmxM.26.2420 546 RHLDTAR|DF 0.129 . LmxM.26.2420 558 DIAIIFK|MQ 0.061 . LmxM.26.2420 570 IMDGQLK|RE 0.056 . LmxM.26.2420 571 MDGQLKR|EA 0.281 . LmxM.26.2420 584 SNTNALR|LL 0.093 . LmxM.26.2420 591 LLIYAVK|HQ 0.068 . LmxM.26.2420 600 IPELHER|AI 0.140 . LmxM.26.2420 607 AISYVAR|NF 0.149 . LmxM.26.2420 614 NFSVMIR|ND 0.110 . LmxM.26.2420 636 AVVSLFR|TV 0.107 . ____________________________^_________________

  • Fasta :-

    >LmxM.26.2420 ATGGAATCGGTAGAGGCCGTGGAGCTCTTCTCGGAGTGCAGCGCACGCTATCGCTACCGC GTGCCGGTGAGCGTGATTCGCGAGCTGCAGTACGAGGGGTCGCGCTACAGCGCTGAGTTC AACGTTGGCGGCTGGTTCTGGCGCTTCCACATTCAAGAGCGATCCGCCGAGGGCCAGCGC TTCCTGGCGCTGCATCTTCAGAGCTGCACGCCGGGTGCTGTCTCTGTCCACTTTAAGCTC ACGGCTGTCTGCATGCGTGACCCGCTGCAGTCGCGCAGCAAGACGTTCAACTGCACCTTT AAGAAGGCTGGAAGTGCGTGGGGACTTCATCAGTTTATCGCGATCGAGCAGCTGCTGCAC CCGGAGAGAGGGTTCGTGTACACGGTGCAGGAGACGGGCACCCGCTGCGTCGATTTTGAG GCGGTGCTGCAGGTGGACAACGGCAGCGGCAACGGGCGTGCTCCGCCTGTGCGCAGCGCA ACCCGCTCCGTCACCCCGACCCGCAGCATCGTTGGCGCCGGCGTTGCAGGAACGAATGGC GGACAGATATCGCCAAGCCGAGGCCCTAGCGTTCGGCCGGTCGGCGTACGTGGCGGCGGC ACTCCAGTGGGACGGAGCGGTAGGACGTCGTACTCGCCTGGCCGGGTCGGCACCAGCGCA CTCGTCCCGATGGAGGGCAGTGTGGACCGGCCCGGCGCGAGTGCCGGGGCCGCGCTGCGT CGCGGCTTCTACAGTGACCCGAACGGTGGTCAGTTGATTACCTTAGACAACGCCTCGATC ATCGGCGGCGATGGTGGTGGCCGACCGCCTGGGAGCGCCGTCGTGCGCGCACCGCTCACG TACCCCTTTGCACACTTGGAGATCCTGTGCGACATGAGCTTCGACGTCCAGGGCGTCCGC GTTAAGGCCCACCGCTGCGTGATTGGCGCGCGTATGCAGCCGCTGCTTCCCGAGCAGATG CTGCCGTTGCAGGTCGGCTGCATCGTCGCCATCGCCGTCCCCCTCGACGTCTTCACAACC TTCCTGCGGTACGTGTACACGGAAGAGTATCCTGAGTCGGGCGTTTTACCGCCGGAGTCG CTGCTTGACTTGTACCTGCTCGCGGCAGCGTGCGAGTTCTACGACCTTAGCGCGGTCTGC ATTCGCTACGTTCGCCCACTCCTCACGCCGGAGAACATTCTACCAATTGTGCTGACACGC TACAACGCTGCGGACGAGGTGCTCACCTCTCTCTACCTGCACGTGCTGCTGGACAACTAT GATATCCTCATCCAGGACCGCCAGTTCGAGGAGATTCCCGGCCACCTCTTCCGTCGTCTT TCGCTAATTCTTTACAGCAAGGAGACGGTGCCGAATGCGCCGATCCCACCCATGAAAAAC ACGCTGGGGAAGCAGATTGCGTGGCTGGCGGAGTCGGGGGAGTACAGCGACTACGAGTGG GTAGTGGGGCCGCAGCAGTACGCGGTGCACGCCCACCGCTACATTCTCGCCTGCCGCTGT GTGTTGTTTTCGCAAGCAATGAACCCACGTAGCCCGGGGCCGCTTCCGTCGTTCACTACC AACGAGTTCGACTTTTCCCTGCGTAGCTGGCAGAAGCTGTTGATGGGGATGTACCGTCGC CACCTTGACACTGCGCGCGACTTCTCGGCCGAGGACATTGCCATCATCTTCAAGATGCAA CAGGTGCTCATCATGGACGGCCAGCTGAAGCGCGAAGCGGATGAGGCGTTTAGCAACACA AACGCCCTGCGCCTCCTCATCTATGCCGTGAAGCATCAAATACCGGAGTTACACGAGCGT GCTATCAGCTACGTGGCGCGCAACTTCAGCGTAATGATCCGTAACGACTCACAGGCGTGG GAGCTGATTAGCGAACTGCCGCAGACGGCTGTGGTGTCTCTGTTCCGCACGGTGACGGAG CAACCGCCGTTGTAG
  • Download Fasta

  • Fasta :-

    MESVEAVELFSECSARYRYRVPVSVIRELQYEGSRYSAEFNVGGWFWRFHIQERSAEGQR FLALHLQSCTPGAVSVHFKLTAVCMRDPLQSRSKTFNCTFKKAGSAWGLHQFIAIEQLLH PERGFVYTVQETGTRCVDFEAVLQVDNGSGNGRAPPVRSATRSVTPTRSIVGAGVAGTNG GQISPSRGPSVRPVGVRGGGTPVGRSGRTSYSPGRVGTSALVPMEGSVDRPGASAGAALR RGFYSDPNGGQLITLDNASIIGGDGGGRPPGSAVVRAPLTYPFAHLEILCDMSFDVQGVR VKAHRCVIGARMQPLLPEQMLPLQVGCIVAIAVPLDVFTTFLRYVYTEEYPESGVLPPES LLDLYLLAAACEFYDLSAVCIRYVRPLLTPENILPIVLTRYNAADEVLTSLYLHVLLDNY DILIQDRQFEEIPGHLFRRLSLILYSKETVPNAPIPPMKNTLGKQIAWLAESGEYSDYEW VVGPQQYAVHAHRYILACRCVLFSQAMNPRSPGPLPSFTTNEFDFSLRSWQKLLMGMYRR HLDTARDFSAEDIAIIFKMQQVLIMDGQLKREADEAFSNTNALRLLIYAVKHQIPELHER AISYVARNFSVMIRNDSQAWELISELPQTAVVSLFRTVTEQPPL

  • title: putative substrate binding site
  • coordinates: H65,A106,W107,G108
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.26.2420549 SARDFSAEDI0.998unspLmxM.26.2420549 SARDFSAEDI0.998unspLmxM.26.2420549 SARDFSAEDI0.998unspLmxM.26.242037 SGSRYSAEFN0.992unspLmxM.26.2420210 SSGRTSYSPG0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India