LmxM.29.0050 | MATH domain containing protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.29.0050OTHER0.9998790.0000260.000095
No Results

  • Fasta :-

    >LmxM.29.0050 MHRLSSLSEGDLCFYQSTLYQLIQDAPIEAKPGREMMRTLRKELSRSMEQEECPEYCAAL ADLYKTVTDTLISAAHRSAPHELINRTTSDCRIVTDEDEYQFHQEEGFFDDEDEDEMDSN SDIKSTAKDAEQKQRKREETKRKRREEEDMLMKERKVTDEKGKQYHTLGPFPPPRLTVRA PTNTFPSRKALQQRTIIETPSSTSSSSDDDEAINQLISSRSTEGGEAVNHLTDFLQPLSI DSLKKVGESAKAKLRPSSTHDEFVSQIVKTAVRLGCEKACVLMEKQKIIEDMTSHVQTGP LPTAASIDFLNTLPDHLKQSLGSVLGLPEEKPPVEDMWERMVAMGFLSVLTNLRLKPLKK IANELSIVLPDTNSTEKFCEFIVFAAFPRERIRAKFSRAKQKKVKFTVPPDSMSIKGDMG FVTFHVNNISMLTKESERHYSPEFHFANLKWSLLCMTNKESLALYLCQTGSVHCKFLITV VNKANPDDSICNEGTQSFSAMSQENDWGFNNVIKFAELLNPDQGFVTADDDSITIEVGIV LVEPLKTPTAREKAPVAKEKKNEPRVDEAAMLQLLADEKVEQTRKKLKQEISKTIREEEK TRKDIAQRASKAYHDLCDRLRQETKRTQKEVADRERKEEQERQRELDKIKQAQEQTAELK SRLQSLKKENAELVQSKQDATQAAKEAKKNSERIAQELKFVLDRVQSTQQKLHTQEKKLA AAKSRYESILAEEPDTPSPSDDENDLMSEDLTRFINLMTDDM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/785 Sequence name : 785 Sequence length : 762 VALUES OF COMPUTED PARAMETERS Coef20 : 3.914 CoefTot : 0.476 ChDiff : -16 ZoneTo : 8 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.729 1.159 0.063 0.429 MesoH : -0.518 0.205 -0.447 0.177 MuHd_075 : 9.854 7.433 4.380 2.456 MuHd_095 : 8.983 6.342 1.514 1.554 MuHd_100 : 9.457 9.688 2.340 3.243 MuHd_105 : 17.737 13.492 4.645 4.580 Hmax_075 : 10.033 4.783 0.247 2.590 Hmax_095 : 5.400 3.100 -1.056 1.890 Hmax_100 : 5.400 4.100 0.029 2.530 Hmax_105 : 5.300 7.300 0.173 2.910 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9110 0.0890 DFMC : 0.8887 0.1113
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 762 LmxM.29.0050 MHRLSSLSEGDLCFYQSTLYQLIQDAPIEAKPGREMMRTLRKELSRSMEQEECPEYCAALADLYKTVTDTLISAAHRSAP 80 HELINRTTSDCRIVTDEDEYQFHQEEGFFDDEDEDEMDSNSDIKSTAKDAEQKQRKREETKRKRREEEDMLMKERKVTDE 160 KGKQYHTLGPFPPPRLTVRAPTNTFPSRKALQQRTIIETPSSTSSSSDDDEAINQLISSRSTEGGEAVNHLTDFLQPLSI 240 DSLKKVGESAKAKLRPSSTHDEFVSQIVKTAVRLGCEKACVLMEKQKIIEDMTSHVQTGPLPTAASIDFLNTLPDHLKQS 320 LGSVLGLPEEKPPVEDMWERMVAMGFLSVLTNLRLKPLKKIANELSIVLPDTNSTEKFCEFIVFAAFPRERIRAKFSRAK 400 QKKVKFTVPPDSMSIKGDMGFVTFHVNNISMLTKESERHYSPEFHFANLKWSLLCMTNKESLALYLCQTGSVHCKFLITV 480 VNKANPDDSICNEGTQSFSAMSQENDWGFNNVIKFAELLNPDQGFVTADDDSITIEVGIVLVEPLKTPTAREKAPVAKEK 560 KNEPRVDEAAMLQLLADEKVEQTRKKLKQEISKTIREEEKTRKDIAQRASKAYHDLCDRLRQETKRTQKEVADRERKEEQ 640 ERQRELDKIKQAQEQTAELKSRLQSLKKENAELVQSKQDATQAAKEAKKNSERIAQELKFVLDRVQSTQQKLHTQEKKLA 720 AAKSRYESILAEEPDTPSPSDDENDLMSEDLTRFINLMTDDM 800 ................................................................................ 80 ................................................................P............... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .......................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmxM.29.0050 3 ----MHR|LS 0.096 . LmxM.29.0050 31 DAPIEAK|PG 0.064 . LmxM.29.0050 34 IEAKPGR|EM 0.106 . LmxM.29.0050 38 PGREMMR|TL 0.110 . LmxM.29.0050 41 EMMRTLR|KE 0.108 . LmxM.29.0050 42 MMRTLRK|EL 0.113 . LmxM.29.0050 46 LRKELSR|SM 0.208 . LmxM.29.0050 65 ALADLYK|TV 0.080 . LmxM.29.0050 77 LISAAHR|SA 0.179 . LmxM.29.0050 86 PHELINR|TT 0.084 . LmxM.29.0050 92 RTTSDCR|IV 0.100 . LmxM.29.0050 124 DSNSDIK|ST 0.086 . LmxM.29.0050 128 DIKSTAK|DA 0.104 . LmxM.29.0050 133 AKDAEQK|QR 0.061 . LmxM.29.0050 135 DAEQKQR|KR 0.086 . LmxM.29.0050 136 AEQKQRK|RE 0.090 . LmxM.29.0050 137 EQKQRKR|EE 0.123 . LmxM.29.0050 141 RKREETK|RK 0.075 . LmxM.29.0050 142 KREETKR|KR 0.227 . LmxM.29.0050 143 REETKRK|RR 0.101 . LmxM.29.0050 144 EETKRKR|RE 0.120 . LmxM.29.0050 145 ETKRKRR|EE 0.533 *ProP* LmxM.29.0050 153 EEDMLMK|ER 0.052 . LmxM.29.0050 155 DMLMKER|KV 0.113 . LmxM.29.0050 156 MLMKERK|VT 0.143 . LmxM.29.0050 161 RKVTDEK|GK 0.064 . LmxM.29.0050 163 VTDEKGK|QY 0.072 . LmxM.29.0050 175 GPFPPPR|LT 0.099 . LmxM.29.0050 179 PPRLTVR|AP 0.095 . LmxM.29.0050 188 TNTFPSR|KA 0.128 . LmxM.29.0050 189 NTFPSRK|AL 0.087 . LmxM.29.0050 194 RKALQQR|TI 0.128 . LmxM.29.0050 220 NQLISSR|ST 0.187 . LmxM.29.0050 244 LSIDSLK|KV 0.090 . LmxM.29.0050 245 SIDSLKK|VG 0.080 . LmxM.29.0050 251 KVGESAK|AK 0.060 . LmxM.29.0050 253 GESAKAK|LR 0.075 . LmxM.29.0050 255 SAKAKLR|PS 0.104 . LmxM.29.0050 269 FVSQIVK|TA 0.059 . LmxM.29.0050 273 IVKTAVR|LG 0.069 . LmxM.29.0050 278 VRLGCEK|AC 0.060 . LmxM.29.0050 285 ACVLMEK|QK 0.071 . LmxM.29.0050 287 VLMEKQK|II 0.085 . LmxM.29.0050 318 TLPDHLK|QS 0.063 . LmxM.29.0050 331 LGLPEEK|PP 0.053 . LmxM.29.0050 340 VEDMWER|MV 0.134 . LmxM.29.0050 354 SVLTNLR|LK 0.059 . LmxM.29.0050 356 LTNLRLK|PL 0.064 . LmxM.29.0050 359 LRLKPLK|KI 0.070 . LmxM.29.0050 360 RLKPLKK|IA 0.093 . LmxM.29.0050 377 DTNSTEK|FC 0.069 . LmxM.29.0050 389 VFAAFPR|ER 0.083 . LmxM.29.0050 391 AAFPRER|IR 0.071 . LmxM.29.0050 393 FPRERIR|AK 0.091 . LmxM.29.0050 395 RERIRAK|FS 0.096 . LmxM.29.0050 398 IRAKFSR|AK 0.171 . LmxM.29.0050 400 AKFSRAK|QK 0.069 . LmxM.29.0050 402 FSRAKQK|KV 0.085 . LmxM.29.0050 403 SRAKQKK|VK 0.200 . LmxM.29.0050 405 AKQKKVK|FT 0.083 . LmxM.29.0050 416 PDSMSIK|GD 0.079 . LmxM.29.0050 434 NISMLTK|ES 0.071 . LmxM.29.0050 438 LTKESER|HY 0.105 . LmxM.29.0050 450 FHFANLK|WS 0.055 . LmxM.29.0050 459 LLCMTNK|ES 0.059 . LmxM.29.0050 475 TGSVHCK|FL 0.110 . LmxM.29.0050 483 LITVVNK|AN 0.059 . LmxM.29.0050 514 GFNNVIK|FA 0.092 . LmxM.29.0050 546 VLVEPLK|TP 0.058 . LmxM.29.0050 551 LKTPTAR|EK 0.103 . LmxM.29.0050 553 TPTAREK|AP 0.068 . LmxM.29.0050 558 EKAPVAK|EK 0.075 . LmxM.29.0050 560 APVAKEK|KN 0.082 . LmxM.29.0050 561 PVAKEKK|NE 0.083 . LmxM.29.0050 565 EKKNEPR|VD 0.126 . LmxM.29.0050 579 QLLADEK|VE 0.052 . LmxM.29.0050 584 EKVEQTR|KK 0.099 . LmxM.29.0050 585 KVEQTRK|KL 0.078 . LmxM.29.0050 586 VEQTRKK|LK 0.105 . LmxM.29.0050 588 QTRKKLK|QE 0.065 . LmxM.29.0050 593 LKQEISK|TI 0.078 . LmxM.29.0050 596 EISKTIR|EE 0.107 . LmxM.29.0050 600 TIREEEK|TR 0.062 . LmxM.29.0050 602 REEEKTR|KD 0.097 . LmxM.29.0050 603 EEEKTRK|DI 0.092 . LmxM.29.0050 608 RKDIAQR|AS 0.091 . LmxM.29.0050 611 IAQRASK|AY 0.139 . LmxM.29.0050 619 YHDLCDR|LR 0.062 . LmxM.29.0050 621 DLCDRLR|QE 0.073 . LmxM.29.0050 625 RLRQETK|RT 0.069 . LmxM.29.0050 626 LRQETKR|TQ 0.201 . LmxM.29.0050 629 ETKRTQK|EV 0.171 . LmxM.29.0050 634 QKEVADR|ER 0.082 . LmxM.29.0050 636 EVADRER|KE 0.097 . LmxM.29.0050 637 VADRERK|EE 0.131 . LmxM.29.0050 642 RKEEQER|QR 0.072 . LmxM.29.0050 644 EEQERQR|EL 0.113 . LmxM.29.0050 648 RQRELDK|IK 0.074 . LmxM.29.0050 650 RELDKIK|QA 0.074 . LmxM.29.0050 660 EQTAELK|SR 0.071 . LmxM.29.0050 662 TAELKSR|LQ 0.104 . LmxM.29.0050 667 SRLQSLK|KE 0.074 . LmxM.29.0050 668 RLQSLKK|EN 0.088 . LmxM.29.0050 677 AELVQSK|QD 0.065 . LmxM.29.0050 685 DATQAAK|EA 0.061 . LmxM.29.0050 688 QAAKEAK|KN 0.086 . LmxM.29.0050 689 AAKEAKK|NS 0.103 . LmxM.29.0050 693 AKKNSER|IA 0.097 . LmxM.29.0050 699 RIAQELK|FV 0.076 . LmxM.29.0050 704 LKFVLDR|VQ 0.103 . LmxM.29.0050 711 VQSTQQK|LH 0.067 . LmxM.29.0050 717 KLHTQEK|KL 0.069 . LmxM.29.0050 718 LHTQEKK|LA 0.107 . LmxM.29.0050 723 KKLAAAK|SR 0.078 . LmxM.29.0050 725 LAAAKSR|YE 0.116 . LmxM.29.0050 753 MSEDLTR|FI 0.113 . ____________________________^_________________

  • Fasta :-

    >LmxM.29.0050 ATGCACCGTCTTTCCTCGTTGTCCGAGGGGGATCTGTGCTTCTACCAGTCCACGTTGTAT CAGCTGATCCAGGATGCTCCGATCGAGGCGAAGCCCGGCCGTGAAATGATGCGCACGCTC CGCAAGGAGCTCTCACGATCGATGGAGCAGGAGGAATGCCCTGAATACTGCGCAGCCTTG GCGGACCTGTACAAAACCGTGACAGATACATTGATATCCGCCGCTCACCGCAGTGCCCCG CACGAGCTCATCAACCGCACCACAAGCGACTGCCGCATTGTCACGGACGAGGATGAGTAT CAGTTCCACCAGGAGGAGGGGTTTTTCGACGACGAGGACGAGGATGAAATGGACTCCAAC AGCGATATCAAGTCCACCGCCAAGGACGCGGAGCAGAAGCAGCGCAAGCGGGAGGAGACG AAGCGTAAGCGCCGCGAGGAGGAGGACATGCTCATGAAGGAGCGCAAGGTCACGGACGAG AAGGGGAAGCAGTACCACACCCTCGGCCCCTTTCCGCCGCCGCGGCTCACGGTGCGCGCC CCCACCAACACCTTTCCCAGCCGCAAGGCACTGCAGCAGCGCACCATCATCGAGACCCCC TCTTCCACGTCTTCATCGTCGGACGATGATGAAGCGATCAACCAGCTCATTAGCAGCCGC TCCACCGAAGGCGGGGAGGCCGTGAATCACCTGACCGACTTTCTTCAGCCCCTCTCTATC GACTCGCTCAAGAAAGTAGGCGAGAGCGCCAAGGCAAAGCTGCGGCCATCCTCAACTCAC GACGAATTTGTGTCCCAAATCGTGAAGACGGCGGTGCGGCTGGGCTGCGAGAAGGCGTGC GTCCTCATGGAGAAGCAGAAGATCATCGAAGACATGACGTCACACGTGCAAACGGGCCCG CTGCCTACGGCTGCCAGCATCGACTTCTTGAACACGCTGCCGGACCACCTGAAGCAGTCG CTGGGTAGTGTGCTGGGCCTTCCGGAGGAGAAGCCCCCGGTGGAGGACATGTGGGAGCGC ATGGTGGCCATGGGCTTCCTCTCCGTCCTAACGAATCTGCGCTTGAAGCCGCTCAAGAAA ATTGCAAACGAGCTTAGCATCGTGCTGCCGGACACCAACTCGACGGAGAAGTTCTGTGAA TTTATCGTTTTCGCTGCCTTTCCACGCGAGCGCATTCGCGCGAAATTTTCCCGCGCTAAA CAGAAGAAGGTGAAGTTCACGGTACCGCCAGACAGCATGAGCATCAAGGGCGACATGGGG TTCGTGACTTTCCACGTCAACAACATATCGATGCTGACGAAGGAATCGGAGCGTCATTAC TCGCCAGAGTTCCACTTTGCCAATCTCAAGTGGAGCCTGCTGTGCATGACGAACAAGGAG TCGCTTGCGCTGTACCTCTGCCAGACCGGCAGCGTGCACTGCAAGTTTCTCATCACGGTG GTGAACAAGGCGAACCCTGATGACTCCATCTGTAATGAAGGCACACAGAGCTTTTCTGCC ATGTCGCAGGAGAACGACTGGGGCTTCAACAACGTCATCAAGTTTGCGGAGCTGCTGAAT CCTGACCAGGGCTTTGTCACTGCCGATGACGACAGCATCACGATCGAGGTCGGCATTGTG TTGGTGGAGCCTCTCAAGACACCCACTGCACGCGAGAAGGCGCCCGTCGCCAAGGAGAAG AAGAACGAACCCCGCGTGGACGAGGCGGCGATGCTGCAGCTGCTGGCTGACGAGAAGGTA GAACAGACGCGCAAGAAGCTCAAGCAGGAGATCAGCAAGACCATCCGGGAGGAGGAGAAG ACACGCAAGGACATCGCCCAGAGGGCCAGCAAGGCGTACCACGACTTGTGTGATCGCCTT CGCCAGGAGACGAAGCGCACACAAAAGGAGGTGGCGGACCGCGAGCGCAAGGAAGAGCAG GAGCGGCAGCGGGAGCTCGACAAGATCAAGCAGGCGCAGGAGCAGACGGCGGAGCTCAAG AGTCGATTACAGTCACTCAAGAAGGAGAATGCGGAGCTGGTGCAGTCGAAGCAGGACGCC ACACAGGCGGCCAAGGAGGCAAAAAAGAACAGCGAGCGCATTGCCCAGGAGCTGAAGTTT GTCCTGGACAGAGTTCAATCGACCCAGCAGAAGCTTCACACCCAGGAGAAGAAGCTTGCA GCGGCCAAGAGCCGTTACGAGAGCATTCTCGCCGAGGAGCCGGACACCCCCAGTCCGTCC GATGATGAGAACGACCTCATGAGCGAGGACCTCACACGCTTTATCAACCTAATGACGGAC GATATGTAA
  • Download Fasta

  • Fasta :-

    MHRLSSLSEGDLCFYQSTLYQLIQDAPIEAKPGREMMRTLRKELSRSMEQEECPEYCAAL ADLYKTVTDTLISAAHRSAPHELINRTTSDCRIVTDEDEYQFHQEEGFFDDEDEDEMDSN SDIKSTAKDAEQKQRKREETKRKRREEEDMLMKERKVTDEKGKQYHTLGPFPPPRLTVRA PTNTFPSRKALQQRTIIETPSSTSSSSDDDEAINQLISSRSTEGGEAVNHLTDFLQPLSI DSLKKVGESAKAKLRPSSTHDEFVSQIVKTAVRLGCEKACVLMEKQKIIEDMTSHVQTGP LPTAASIDFLNTLPDHLKQSLGSVLGLPEEKPPVEDMWERMVAMGFLSVLTNLRLKPLKK IANELSIVLPDTNSTEKFCEFIVFAAFPRERIRAKFSRAKQKKVKFTVPPDSMSIKGDMG FVTFHVNNISMLTKESERHYSPEFHFANLKWSLLCMTNKESLALYLCQTGSVHCKFLITV VNKANPDDSICNEGTQSFSAMSQENDWGFNNVIKFAELLNPDQGFVTADDDSITIEVGIV LVEPLKTPTAREKAPVAKEKKNEPRVDEAAMLQLLADEKVEQTRKKLKQEISKTIREEEK TRKDIAQRASKAYHDLCDRLRQETKRTQKEVADRERKEEQERQRELDKIKQAQEQTAELK SRLQSLKKENAELVQSKQDATQAAKEAKKNSERIAQELKFVLDRVQSTQQKLHTQEKKLA AAKSRYESILAEEPDTPSPSDDENDLMSEDLTRFINLMTDDM

  • title: putative substrate binding site
  • coordinates: Y465,D506,W507,G508
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.29.005047 SELSRSMEQE0.994unspLmxM.29.005047 SELSRSMEQE0.994unspLmxM.29.005047 SELSRSMEQE0.994unspLmxM.29.005089 SNRTTSDCRI0.995unspLmxM.29.0050119 SDEMDSNSDI0.991unspLmxM.29.0050140 TKREETKRKR0.992unspLmxM.29.0050204 SPSSTSSSSD0.993unspLmxM.29.0050205 SSSTSSSSDD0.997unspLmxM.29.0050206 SSTSSSSDDD0.997unspLmxM.29.0050207 STSSSSDDDE0.997unspLmxM.29.0050221 SISSRSTEGG0.993unspLmxM.29.0050257 SKLRPSSTHD0.99unspLmxM.29.0050258 SLRPSSTHDE0.998unspLmxM.29.0050441 SERHYSPEFH0.997unspLmxM.29.0050738 SPDTPSPSDD0.997unspLmxM.29.0050740 STPSPSDDEN0.994unspLmxM.29.00506 SHRLSSLSEG0.997unspLmxM.29.00508 SLSSLSEGDL0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India