LmxM.30.0390 | Calpain-like protein 2

_IDPredictionOTHERSPmTPCS_Position
LmxM.30.0390OTHER0.9998250.0001560.000019
No Results

  • Fasta :-

    >LmxM.30.0390 MPVATAEPQPFEFPPGYVMPLPTRPSKMDEDALHPVRVPTPLPDLLPRNMKDIQKMRNLQ SDGDTAKKYVPPRRDLPPPYVNDDECDEFEDKTIDTTILNMSEKDRTKRMGHTYQLNGPA VEGDVTPVFENGLLFKVVTPDGSWYYYNDTDKYEMHVKFTFGAKSDLQPGEKVDMYVMST SELSASLVVFPGETTKLVAGKINGFKCSAKAVPLNDDKRDILYGEVNDRIADDLMDMAQA IGVREDDLTEEKVLAYCEENEKPYIDCDFRPCDYSLYRADVDTYLPRFIPWHRPSTWIPE EQLTEVRLFRRDILPSQVTHGSIGDTYLVSAIAALTDASGDRLHDLFRHPVSAANGKIER ALGAYWVTINFNGWWLPVLLDDFLPATRDGPEFARCAVDIRRMWVALLEKTYAKVHGSYA NIASGDPLEPLSEFTGFPVTRYESFWEDARGGDDMLFQEMLSYNRMGHLQVLCTPSDGGE AFGNANVVSANPELEATYEKMGLLLHHGYAVLQTEYFEDLDLRLLRLRNPWGNGSEWTGA WSKDDKRWNKYPSVRNACYRHGGSPTDADRTFWVEWCDALKIFSGGGCCHLRTPWFDYRV RGEFAQGIPTISFEVNVSAPTEAYITLSQEDERDDPSLEYHALLLSVFRHSGKKEKLDAT SNSLVEKPDRQLKFNFSRDVAMKYTFLPEHSPYFIIPRIHDPSVTKPYVMGLLCDTYIGN GIKVEFKRVDRNCRVFANMPSFAPAGMMEDTAAEYQIRTPRQPIECIGEEIVDERLREFG ILEE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/155 Sequence name : 155 Sequence length : 784 VALUES OF COMPUTED PARAMETERS Coef20 : 2.681 CoefTot : 0.029 ChDiff : -37 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.176 1.076 0.033 0.612 MesoH : -0.550 0.248 -0.400 0.237 MuHd_075 : 12.320 4.284 2.707 0.619 MuHd_095 : 6.374 8.579 2.156 2.179 MuHd_100 : 4.134 9.793 2.223 2.461 MuHd_105 : 6.097 8.226 2.019 2.366 Hmax_075 : 11.083 6.600 -0.181 3.660 Hmax_095 : 8.050 6.300 0.347 4.060 Hmax_100 : 6.600 6.300 -0.324 3.540 Hmax_105 : 9.333 6.417 0.861 4.410 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9858 0.0142 DFMC : 0.9718 0.0282
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 784 LmxM.30.0390 MPVATAEPQPFEFPPGYVMPLPTRPSKMDEDALHPVRVPTPLPDLLPRNMKDIQKMRNLQSDGDTAKKYVPPRRDLPPPY 80 VNDDECDEFEDKTIDTTILNMSEKDRTKRMGHTYQLNGPAVEGDVTPVFENGLLFKVVTPDGSWYYYNDTDKYEMHVKFT 160 FGAKSDLQPGEKVDMYVMSTSELSASLVVFPGETTKLVAGKINGFKCSAKAVPLNDDKRDILYGEVNDRIADDLMDMAQA 240 IGVREDDLTEEKVLAYCEENEKPYIDCDFRPCDYSLYRADVDTYLPRFIPWHRPSTWIPEEQLTEVRLFRRDILPSQVTH 320 GSIGDTYLVSAIAALTDASGDRLHDLFRHPVSAANGKIERALGAYWVTINFNGWWLPVLLDDFLPATRDGPEFARCAVDI 400 RRMWVALLEKTYAKVHGSYANIASGDPLEPLSEFTGFPVTRYESFWEDARGGDDMLFQEMLSYNRMGHLQVLCTPSDGGE 480 AFGNANVVSANPELEATYEKMGLLLHHGYAVLQTEYFEDLDLRLLRLRNPWGNGSEWTGAWSKDDKRWNKYPSVRNACYR 560 HGGSPTDADRTFWVEWCDALKIFSGGGCCHLRTPWFDYRVRGEFAQGIPTISFEVNVSAPTEAYITLSQEDERDDPSLEY 640 HALLLSVFRHSGKKEKLDATSNSLVEKPDRQLKFNFSRDVAMKYTFLPEHSPYFIIPRIHDPSVTKPYVMGLLCDTYIGN 720 GIKVEFKRVDRNCRVFANMPSFAPAGMMEDTAAEYQIRTPRQPIECIGEEIVDERLREFGILEE 800 ................................................................................ 80 ............................P................................................... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmxM.30.0390 24 VMPLPTR|PS 0.076 . LmxM.30.0390 27 LPTRPSK|MD 0.195 . LmxM.30.0390 37 DALHPVR|VP 0.068 . LmxM.30.0390 48 LPDLLPR|NM 0.108 . LmxM.30.0390 51 LLPRNMK|DI 0.190 . LmxM.30.0390 55 NMKDIQK|MR 0.058 . LmxM.30.0390 57 KDIQKMR|NL 0.105 . LmxM.30.0390 67 SDGDTAK|KY 0.067 . LmxM.30.0390 68 DGDTAKK|YV 0.108 . LmxM.30.0390 73 KKYVPPR|RD 0.078 . LmxM.30.0390 74 KYVPPRR|DL 0.146 . LmxM.30.0390 92 CDEFEDK|TI 0.068 . LmxM.30.0390 104 ILNMSEK|DR 0.080 . LmxM.30.0390 106 NMSEKDR|TK 0.113 . LmxM.30.0390 108 SEKDRTK|RM 0.062 . LmxM.30.0390 109 EKDRTKR|MG 0.604 *ProP* LmxM.30.0390 136 ENGLLFK|VV 0.077 . LmxM.30.0390 152 YYNDTDK|YE 0.072 . LmxM.30.0390 158 KYEMHVK|FT 0.077 . LmxM.30.0390 164 KFTFGAK|SD 0.069 . LmxM.30.0390 172 DLQPGEK|VD 0.059 . LmxM.30.0390 196 FPGETTK|LV 0.080 . LmxM.30.0390 201 TKLVAGK|IN 0.074 . LmxM.30.0390 206 GKINGFK|CS 0.065 . LmxM.30.0390 210 GFKCSAK|AV 0.075 . LmxM.30.0390 218 VPLNDDK|RD 0.055 . LmxM.30.0390 219 PLNDDKR|DI 0.295 . LmxM.30.0390 229 YGEVNDR|IA 0.113 . LmxM.30.0390 244 AQAIGVR|ED 0.078 . LmxM.30.0390 252 DDLTEEK|VL 0.056 . LmxM.30.0390 262 YCEENEK|PY 0.056 . LmxM.30.0390 270 YIDCDFR|PC 0.078 . LmxM.30.0390 278 CDYSLYR|AD 0.070 . LmxM.30.0390 287 VDTYLPR|FI 0.105 . LmxM.30.0390 293 RFIPWHR|PS 0.089 . LmxM.30.0390 307 EQLTEVR|LF 0.065 . LmxM.30.0390 310 TEVRLFR|RD 0.128 . LmxM.30.0390 311 EVRLFRR|DI 0.246 . LmxM.30.0390 342 TDASGDR|LH 0.082 . LmxM.30.0390 348 RLHDLFR|HP 0.088 . LmxM.30.0390 357 VSAANGK|IE 0.066 . LmxM.30.0390 360 ANGKIER|AL 0.134 . LmxM.30.0390 388 DFLPATR|DG 0.065 . LmxM.30.0390 395 DGPEFAR|CA 0.123 . LmxM.30.0390 401 RCAVDIR|RM 0.083 . LmxM.30.0390 402 CAVDIRR|MW 0.129 . LmxM.30.0390 410 WVALLEK|TY 0.059 . LmxM.30.0390 414 LEKTYAK|VH 0.064 . LmxM.30.0390 441 TGFPVTR|YE 0.137 . LmxM.30.0390 450 SFWEDAR|GG 0.106 . LmxM.30.0390 465 EMLSYNR|MG 0.066 . LmxM.30.0390 500 LEATYEK|MG 0.054 . LmxM.30.0390 523 FEDLDLR|LL 0.068 . LmxM.30.0390 526 LDLRLLR|LR 0.174 . LmxM.30.0390 528 LRLLRLR|NP 0.077 . LmxM.30.0390 543 WTGAWSK|DD 0.064 . LmxM.30.0390 546 AWSKDDK|RW 0.069 . LmxM.30.0390 547 WSKDDKR|WN 0.105 . LmxM.30.0390 550 DDKRWNK|YP 0.122 . LmxM.30.0390 555 NKYPSVR|NA 0.104 . LmxM.30.0390 560 VRNACYR|HG 0.118 . LmxM.30.0390 570 SPTDADR|TF 0.079 . LmxM.30.0390 581 EWCDALK|IF 0.069 . LmxM.30.0390 592 GGCCHLR|TP 0.072 . LmxM.30.0390 599 TPWFDYR|VR 0.092 . LmxM.30.0390 601 WFDYRVR|GE 0.086 . LmxM.30.0390 633 LSQEDER|DD 0.092 . LmxM.30.0390 649 LLLSVFR|HS 0.118 . LmxM.30.0390 653 VFRHSGK|KE 0.057 . LmxM.30.0390 654 FRHSGKK|EK 0.098 . LmxM.30.0390 656 HSGKKEK|LD 0.067 . LmxM.30.0390 667 SNSLVEK|PD 0.078 . LmxM.30.0390 670 LVEKPDR|QL 0.078 . LmxM.30.0390 673 KPDRQLK|FN 0.126 . LmxM.30.0390 678 LKFNFSR|DV 0.169 . LmxM.30.0390 683 SRDVAMK|YT 0.092 . LmxM.30.0390 698 PYFIIPR|IH 0.086 . LmxM.30.0390 706 HDPSVTK|PY 0.062 . LmxM.30.0390 723 YIGNGIK|VE 0.054 . LmxM.30.0390 727 GIKVEFK|RV 0.078 . LmxM.30.0390 728 IKVEFKR|VD 0.152 . LmxM.30.0390 731 EFKRVDR|NC 0.164 . LmxM.30.0390 734 RVDRNCR|VF 0.147 . LmxM.30.0390 758 AAEYQIR|TP 0.084 . LmxM.30.0390 761 YQIRTPR|QP 0.214 . LmxM.30.0390 775 EEIVDER|LR 0.082 . LmxM.30.0390 777 IVDERLR|EF 0.091 . ____________________________^_________________

  • Fasta :-

    >LmxM.30.0390 ATGCCTGTTGCAACAGCCGAGCCGCAGCCGTTTGAGTTCCCACCAGGGTACGTGATGCCG CTACCCACCCGTCCGAGCAAGATGGATGAGGACGCGCTGCATCCCGTGCGCGTGCCGACA CCGCTGCCGGACCTGCTGCCGCGCAACATGAAGGACATCCAGAAGATGCGTAACCTGCAG TCCGACGGCGACACAGCCAAGAAGTACGTGCCACCGCGCCGCGACCTGCCGCCGCCGTAC GTGAACGACGACGAGTGCGACGAGTTCGAGGACAAGACGATCGACACGACCATCCTGAAC ATGTCGGAGAAGGACCGCACGAAGCGCATGGGCCACACCTACCAGTTAAACGGCCCCGCC GTTGAGGGCGACGTCACGCCGGTCTTCGAGAACGGCCTGCTCTTCAAGGTCGTGACGCCA GATGGCTCTTGGTACTACTACAACGACACGGACAAGTACGAGATGCATGTGAAGTTCACC TTCGGCGCCAAGTCAGACCTACAACCCGGCGAAAAAGTCGACATGTACGTTATGAGCACA AGCGAGCTGTCCGCCTCCCTCGTCGTCTTCCCCGGCGAGACGACGAAGCTGGTAGCTGGA AAGATCAACGGCTTCAAGTGCAGCGCTAAGGCGGTGCCACTTAACGACGACAAGCGCGAC ATCCTCTACGGCGAAGTCAACGACCGCATCGCCGACGATCTGATGGACATGGCGCAGGCA ATCGGCGTTCGGGAAGACGACTTGACAGAGGAGAAGGTGCTGGCGTACTGCGAGGAAAAC GAGAAGCCGTACATCGACTGCGACTTCCGCCCGTGCGACTACTCGCTCTACCGCGCTGAC GTGGACACGTACCTGCCGCGCTTCATCCCGTGGCACCGCCCATCCACCTGGATCCCGGAA GAGCAGCTCACGGAGGTGCGCCTCTTCCGCCGTGACATCCTGCCGTCCCAGGTGACACAC GGTTCCATCGGCGACACCTACCTCGTCTCTGCCATCGCCGCCCTGACCGACGCCAGCGGC GACCGGCTGCACGACCTCTTCCGCCACCCGGTGAGCGCCGCCAACGGCAAGATCGAGCGT GCCCTCGGTGCCTACTGGGTCACCATAAACTTCAACGGCTGGTGGCTGCCGGTACTGCTG GACGACTTCCTGCCTGCGACGCGTGACGGCCCCGAGTTTGCGCGGTGCGCGGTGGACATT CGGCGCATGTGGGTGGCGCTACTGGAGAAGACGTACGCGAAGGTGCACGGCTCCTACGCG AACATCGCGAGCGGCGACCCACTGGAGCCGCTCTCAGAGTTCACCGGCTTCCCAGTGACC CGCTACGAGAGCTTCTGGGAGGACGCGCGGGGCGGTGACGACATGCTGTTTCAGGAGATG CTGTCGTACAACAGGATGGGGCACTTGCAGGTGCTCTGCACCCCGTCCGACGGCGGCGAG GCATTCGGCAACGCGAACGTCGTCAGCGCAAACCCGGAGCTGGAAGCGACGTACGAGAAG ATGGGCCTCCTCCTACACCATGGCTACGCAGTGCTGCAGACGGAGTACTTCGAGGACCTC GACCTCCGTCTGCTGCGCCTCCGCAACCCGTGGGGCAACGGCTCTGAGTGGACCGGCGCG TGGAGCAAGGACGACAAGCGCTGGAACAAGTACCCGTCTGTGCGCAACGCGTGCTACCGG CACGGTGGCAGCCCGACGGATGCCGACCGCACGTTCTGGGTAGAGTGGTGTGACGCGCTC AAGATCTTCTCCGGCGGTGGATGCTGCCACCTGCGCACTCCGTGGTTCGACTACCGCGTC CGTGGCGAGTTTGCCCAGGGCATCCCGACCATCTCTTTCGAGGTTAACGTGTCCGCGCCG ACGGAGGCCTACATCACTCTCTCGCAGGAGGACGAGCGCGATGACCCGTCGCTGGAGTAC CACGCACTCCTGCTGAGCGTGTTCCGGCACAGCGGCAAGAAGGAAAAGCTGGACGCCACC AGCAACTCGCTTGTGGAGAAGCCGGACCGCCAGCTCAAGTTCAACTTCTCGCGTGACGTG GCGATGAAGTACACCTTTTTGCCAGAGCACAGCCCGTACTTTATCATCCCGCGCATCCAC GACCCCAGCGTGACGAAGCCGTACGTGATGGGCCTACTGTGTGACACCTACATTGGCAAC GGCATCAAGGTGGAGTTCAAGCGGGTGGACCGCAACTGCCGCGTCTTCGCTAACATGCCG TCCTTTGCACCGGCAGGAATGATGGAGGACACTGCGGCTGAGTACCAGATCCGCACTCCA CGGCAGCCAATTGAGTGCATCGGGGAGGAGATCGTCGACGAGCGCCTACGCGAGTTTGGC ATTCTGGAGGAGTAG
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  • Fasta :-

    MPVATAEPQPFEFPPGYVMPLPTRPSKMDEDALHPVRVPTPLPDLLPRNMKDIQKMRNLQ SDGDTAKKYVPPRRDLPPPYVNDDECDEFEDKTIDTTILNMSEKDRTKRMGHTYQLNGPA VEGDVTPVFENGLLFKVVTPDGSWYYYNDTDKYEMHVKFTFGAKSDLQPGEKVDMYVMST SELSASLVVFPGETTKLVAGKINGFKCSAKAVPLNDDKRDILYGEVNDRIADDLMDMAQA IGVREDDLTEEKVLAYCEENEKPYIDCDFRPCDYSLYRADVDTYLPRFIPWHRPSTWIPE EQLTEVRLFRRDILPSQVTHGSIGDTYLVSAIAALTDASGDRLHDLFRHPVSAANGKIER ALGAYWVTINFNGWWLPVLLDDFLPATRDGPEFARCAVDIRRMWVALLEKTYAKVHGSYA NIASGDPLEPLSEFTGFPVTRYESFWEDARGGDDMLFQEMLSYNRMGHLQVLCTPSDGGE AFGNANVVSANPELEATYEKMGLLLHHGYAVLQTEYFEDLDLRLLRLRNPWGNGSEWTGA WSKDDKRWNKYPSVRNACYRHGGSPTDADRTFWVEWCDALKIFSGGGCCHLRTPWFDYRV RGEFAQGIPTISFEVNVSAPTEAYITLSQEDERDDPSLEYHALLLSVFRHSGKKEKLDAT SNSLVEKPDRQLKFNFSRDVAMKYTFLPEHSPYFIIPRIHDPSVTKPYVMGLLCDTYIGN GIKVEFKRVDRNCRVFANMPSFAPAGMMEDTAAEYQIRTPRQPIECIGEEIVDERLREFG ILEE

  • title: catalytic site
  • coordinates: T326,H507,N529
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.30.0390564 SRHGGSPTDA0.997unspLmxM.30.0390564 SRHGGSPTDA0.997unspLmxM.30.0390564 SRHGGSPTDA0.997unspLmxM.30.0390628 SYITLSQEDE0.997unspLmxM.30.0390651 SVFRHSGKKE0.998unspLmxM.30.039026 SPTRPSKMDE0.996unspLmxM.30.0390102 SILNMSEKDR0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India