LmxM.30.0400 | cysteine peptidase, Clan CA, family C2, putative

_IDPredictionOTHERSPmTPCS_Position
LmxM.30.0400OTHER0.9999760.0000180.000006
No Results

  • Fasta :-

    >LmxM.30.0400 MSGTKAAITESSASLAADSVVPEERPETRQYGLTDNLHISPANRMAAEKLVAFVCAVSDP EVLHVIYDYLEEHQKAVPRYRLATKACRELLERKEEMLTACLSTSGGAHELKQPSVAGTR RSRSVSVPQLVDSPEKKAETARAGKGLTEAQRLLQQIAETDGCDKGDDDDADMDEFDDLN YFSAPYTPSSRFSFGQPSVSGLVTRVFSEGMLYKIKTPKGEYHFYNDTLQEVMVVRVQCH LRGNEKINERAMLSSVAGTGETEITIAVLPEETNFFMSGVAHMPHFMAKRVPVPCDYVSP SVTQSLRKISAGINAVRKALGKWSRASDQQAYLKCCLQNNLRFTDLNFRPSSESLCRPEF DAVVIPAVTWRRPEEYIYLAEVSQTRLFRGEISCFLVKQGELSNHTVVAAMAAVAQFPDH VRWMFRHPVSAHVGKRERSQGCYRVTLLHNGWWHTYLVDDYVPASLRGPLFASCAEDPRR LWVQLLEKAYAKSLGSYAATCLVDAMEALGDFTGFPVRFLDSLWAAAAQNPRDDAFRSLF RYLERSVRAGCTVLLFSPAPTDEQSSATVDMSRKRSSRIMPVKGAVPQFLPGHIYFLRDV AFYKELDLRMVQLKNPWTWETKNKIHYEKKWKYTTWYDQPDPSLSAIASTTASLHGQVSS RVLASHALNPRAGAALSPEAVALNERKGTMWVEWGEALAAFAGGGVCYTMWDRHRYQVRN AFVEGRPRLVLELRARRAVELLVTLSLETVSETLDNFGTVVAARPIPLHGTALSVVHRQA NQSAKVVRESCDDIESVTGCRTYVVARDVSIKVVVDPSTSSNGASVLVVPLLDPTAVSAA AVGASSGSSSNAASTAAAAEVRFVVSIVSDAVAGDGEDLSIHFVSLRRSCGVFTDSTAAF PLEGSSRMTAQYQVCTKEGVATCEGSRISGNETKSM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/770 Sequence name : 770 Sequence length : 936 VALUES OF COMPUTED PARAMETERS Coef20 : 4.393 CoefTot : 0.031 ChDiff : -1 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.176 1.847 0.184 0.611 MesoH : 0.256 0.833 -0.083 0.328 MuHd_075 : 19.226 10.880 5.803 3.715 MuHd_095 : 16.507 9.917 4.145 2.326 MuHd_100 : 8.550 5.983 1.259 0.701 MuHd_105 : 3.908 1.195 1.522 0.910 Hmax_075 : 10.150 7.900 1.694 3.380 Hmax_095 : 13.300 9.700 1.807 3.350 Hmax_100 : 3.900 7.000 -0.508 2.630 Hmax_105 : 8.867 5.425 0.885 2.590 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9210 0.0790 DFMC : 0.9447 0.0553
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 936 LmxM.30.0400 MSGTKAAITESSASLAADSVVPEERPETRQYGLTDNLHISPANRMAAEKLVAFVCAVSDPEVLHVIYDYLEEHQKAVPRY 80 RLATKACRELLERKEEMLTACLSTSGGAHELKQPSVAGTRRSRSVSVPQLVDSPEKKAETARAGKGLTEAQRLLQQIAET 160 DGCDKGDDDDADMDEFDDLNYFSAPYTPSSRFSFGQPSVSGLVTRVFSEGMLYKIKTPKGEYHFYNDTLQEVMVVRVQCH 240 LRGNEKINERAMLSSVAGTGETEITIAVLPEETNFFMSGVAHMPHFMAKRVPVPCDYVSPSVTQSLRKISAGINAVRKAL 320 GKWSRASDQQAYLKCCLQNNLRFTDLNFRPSSESLCRPEFDAVVIPAVTWRRPEEYIYLAEVSQTRLFRGEISCFLVKQG 400 ELSNHTVVAAMAAVAQFPDHVRWMFRHPVSAHVGKRERSQGCYRVTLLHNGWWHTYLVDDYVPASLRGPLFASCAEDPRR 480 LWVQLLEKAYAKSLGSYAATCLVDAMEALGDFTGFPVRFLDSLWAAAAQNPRDDAFRSLFRYLERSVRAGCTVLLFSPAP 560 TDEQSSATVDMSRKRSSRIMPVKGAVPQFLPGHIYFLRDVAFYKELDLRMVQLKNPWTWETKNKIHYEKKWKYTTWYDQP 640 DPSLSAIASTTASLHGQVSSRVLASHALNPRAGAALSPEAVALNERKGTMWVEWGEALAAFAGGGVCYTMWDRHRYQVRN 720 AFVEGRPRLVLELRARRAVELLVTLSLETVSETLDNFGTVVAARPIPLHGTALSVVHRQANQSAKVVRESCDDIESVTGC 800 RTYVVARDVSIKVVVDPSTSSNGASVLVVPLLDPTAVSAAAVGASSGSSSNAASTAAAAEVRFVVSIVSDAVAGDGEDLS 880 IHFVSLRRSCGVFTDSTAAFPLEGSSRMTAQYQVCTKEGVATCEGSRISGNETKSM 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ........................................................ 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.30.0400 5 --MSGTK|AA 0.065 . LmxM.30.0400 25 SVVPEER|PE 0.080 . LmxM.30.0400 29 EERPETR|QY 0.099 . LmxM.30.0400 44 HISPANR|MA 0.155 . LmxM.30.0400 49 NRMAAEK|LV 0.074 . LmxM.30.0400 75 YLEEHQK|AV 0.071 . LmxM.30.0400 79 HQKAVPR|YR 0.091 . LmxM.30.0400 81 KAVPRYR|LA 0.121 . LmxM.30.0400 85 RYRLATK|AC 0.065 . LmxM.30.0400 88 LATKACR|EL 0.070 . LmxM.30.0400 93 CRELLER|KE 0.074 . LmxM.30.0400 94 RELLERK|EE 0.059 . LmxM.30.0400 112 GGAHELK|QP 0.073 . LmxM.30.0400 120 PSVAGTR|RS 0.066 . LmxM.30.0400 121 SVAGTRR|SR 0.306 . LmxM.30.0400 123 AGTRRSR|SV 0.473 . LmxM.30.0400 136 LVDSPEK|KA 0.071 . LmxM.30.0400 137 VDSPEKK|AE 0.103 . LmxM.30.0400 142 KKAETAR|AG 0.107 . LmxM.30.0400 145 ETARAGK|GL 0.165 . LmxM.30.0400 152 GLTEAQR|LL 0.087 . LmxM.30.0400 165 ETDGCDK|GD 0.060 . LmxM.30.0400 191 PYTPSSR|FS 0.089 . LmxM.30.0400 205 VSGLVTR|VF 0.109 . LmxM.30.0400 214 SEGMLYK|IK 0.072 . LmxM.30.0400 216 GMLYKIK|TP 0.060 . LmxM.30.0400 219 YKIKTPK|GE 0.068 . LmxM.30.0400 236 QEVMVVR|VQ 0.083 . LmxM.30.0400 242 RVQCHLR|GN 0.118 . LmxM.30.0400 246 HLRGNEK|IN 0.070 . LmxM.30.0400 250 NEKINER|AM 0.074 . LmxM.30.0400 289 MPHFMAK|RV 0.085 . LmxM.30.0400 290 PHFMAKR|VP 0.110 . LmxM.30.0400 307 SVTQSLR|KI 0.121 . LmxM.30.0400 308 VTQSLRK|IS 0.074 . LmxM.30.0400 317 AGINAVR|KA 0.080 . LmxM.30.0400 318 GINAVRK|AL 0.124 . LmxM.30.0400 322 VRKALGK|WS 0.074 . LmxM.30.0400 325 ALGKWSR|AS 0.136 . LmxM.30.0400 334 DQQAYLK|CC 0.058 . LmxM.30.0400 342 CLQNNLR|FT 0.086 . LmxM.30.0400 349 FTDLNFR|PS 0.078 . LmxM.30.0400 357 SSESLCR|PE 0.096 . LmxM.30.0400 371 IPAVTWR|RP 0.105 . LmxM.30.0400 372 PAVTWRR|PE 0.113 . LmxM.30.0400 386 AEVSQTR|LF 0.086 . LmxM.30.0400 389 SQTRLFR|GE 0.204 . LmxM.30.0400 398 ISCFLVK|QG 0.066 . LmxM.30.0400 422 QFPDHVR|WM 0.084 . LmxM.30.0400 426 HVRWMFR|HP 0.088 . LmxM.30.0400 435 VSAHVGK|RE 0.071 . LmxM.30.0400 436 SAHVGKR|ER 0.267 . LmxM.30.0400 438 HVGKRER|SQ 0.174 . LmxM.30.0400 444 RSQGCYR|VT 0.079 . LmxM.30.0400 467 YVPASLR|GP 0.065 . LmxM.30.0400 479 SCAEDPR|RL 0.091 . LmxM.30.0400 480 CAEDPRR|LW 0.117 . LmxM.30.0400 488 WVQLLEK|AY 0.066 . LmxM.30.0400 492 LEKAYAK|SL 0.101 . LmxM.30.0400 518 FTGFPVR|FL 0.090 . LmxM.30.0400 532 AAAQNPR|DD 0.075 . LmxM.30.0400 537 PRDDAFR|SL 0.156 . LmxM.30.0400 541 AFRSLFR|YL 0.109 . LmxM.30.0400 545 LFRYLER|SV 0.214 . LmxM.30.0400 548 YLERSVR|AG 0.244 . LmxM.30.0400 573 ATVDMSR|KR 0.077 . LmxM.30.0400 574 TVDMSRK|RS 0.087 . LmxM.30.0400 575 VDMSRKR|SS 0.265 . LmxM.30.0400 578 SRKRSSR|IM 0.318 . LmxM.30.0400 583 SRIMPVK|GA 0.093 . LmxM.30.0400 598 GHIYFLR|DV 0.123 . LmxM.30.0400 604 RDVAFYK|EL 0.068 . LmxM.30.0400 609 YKELDLR|MV 0.104 . LmxM.30.0400 614 LRMVQLK|NP 0.072 . LmxM.30.0400 622 PWTWETK|NK 0.062 . LmxM.30.0400 624 TWETKNK|IH 0.070 . LmxM.30.0400 629 NKIHYEK|KW 0.060 . LmxM.30.0400 630 KIHYEKK|WK 0.109 . LmxM.30.0400 632 HYEKKWK|YT 0.069 . LmxM.30.0400 661 HGQVSSR|VL 0.084 . LmxM.30.0400 671 SHALNPR|AG 0.082 . LmxM.30.0400 686 AVALNER|KG 0.071 . LmxM.30.0400 687 VALNERK|GT 0.113 . LmxM.30.0400 713 CYTMWDR|HR 0.082 . LmxM.30.0400 715 TMWDRHR|YQ 0.087 . LmxM.30.0400 719 RHRYQVR|NA 0.129 . LmxM.30.0400 726 NAFVEGR|PR 0.076 . LmxM.30.0400 728 FVEGRPR|LV 0.082 . LmxM.30.0400 734 RLVLELR|AR 0.092 . LmxM.30.0400 736 VLELRAR|RA 0.095 . LmxM.30.0400 737 LELRARR|AV 0.422 . LmxM.30.0400 764 GTVVAAR|PI 0.098 . LmxM.30.0400 778 ALSVVHR|QA 0.169 . LmxM.30.0400 785 QANQSAK|VV 0.101 . LmxM.30.0400 788 QSAKVVR|ES 0.134 . LmxM.30.0400 801 ESVTGCR|TY 0.074 . LmxM.30.0400 807 RTYVVAR|DV 0.261 . LmxM.30.0400 812 ARDVSIK|VV 0.072 . LmxM.30.0400 862 AAAAEVR|FV 0.135 . LmxM.30.0400 887 IHFVSLR|RS 0.093 . LmxM.30.0400 888 HFVSLRR|SC 0.184 . LmxM.30.0400 907 PLEGSSR|MT 0.110 . LmxM.30.0400 917 QYQVCTK|EG 0.059 . LmxM.30.0400 927 ATCEGSR|IS 0.089 . LmxM.30.0400 934 ISGNETK|SM 0.089 . ____________________________^_________________

  • Fasta :-

    >LmxM.30.0400 ATGAGCGGGACCAAGGCAGCCATCACGGAGTCCTCAGCGAGTCTGGCGGCAGACTCGGTT GTGCCAGAGGAGCGACCCGAGACGCGGCAGTACGGTCTCACCGACAACCTGCACATCTCA CCGGCGAACCGCATGGCCGCAGAGAAGCTTGTGGCCTTTGTGTGCGCCGTCTCTGATCCG GAAGTGCTGCACGTTATCTACGACTACCTCGAGGAGCATCAGAAAGCGGTGCCGCGGTAC CGCCTCGCGACGAAGGCGTGCCGTGAGCTTTTGGAGCGCAAAGAAGAGATGCTGACGGCT TGCTTGTCCACCAGCGGCGGTGCTCACGAGTTAAAACAGCCCAGCGTGGCTGGGACCCGT CGCTCTCGTAGTGTTTCGGTGCCACAGCTCGTGGACTCGCCAGAGAAGAAGGCGGAAACA GCGAGGGCAGGGAAAGGCCTGACGGAGGCGCAGCGCCTCTTGCAGCAGATTGCGGAGACG GACGGCTGCGACAAGGGGGACGACGATGATGCCGATATGGATGAGTTTGATGACCTCAAT TACTTCTCGGCGCCCTACACCCCATCCAGCCGCTTCAGCTTTGGACAGCCGAGCGTCTCC GGTCTCGTCACTCGGGTCTTTTCGGAGGGTATGCTGTACAAGATCAAGACCCCAAAAGGC GAGTACCACTTCTACAACGATACCCTGCAGGAGGTGATGGTGGTGCGCGTGCAGTGCCAT CTGCGCGGCAACGAAAAGATCAACGAGCGCGCCATGCTCTCGTCCGTCGCGGGTACCGGC GAGACGGAGATTACGATTGCCGTCTTGCCGGAGGAGACGAACTTTTTCATGAGTGGGGTG GCACATATGCCGCACTTCATGGCAAAGCGAGTGCCGGTTCCGTGCGACTACGTCTCTCCG TCGGTGACGCAGTCGCTGCGCAAGATCAGCGCCGGTATCAACGCTGTGCGCAAGGCGCTT GGCAAGTGGAGCCGAGCCTCGGACCAGCAGGCGTACCTGAAGTGCTGCCTCCAGAACAAC CTCCGCTTCACGGACCTCAACTTCCGCCCGAGTTCGGAGAGCCTGTGTCGCCCTGAGTTC GACGCGGTCGTCATACCGGCCGTCACATGGCGGCGGCCGGAGGAGTACATCTACCTCGCC GAGGTGTCGCAGACGCGTCTATTCCGCGGTGAGATCTCGTGCTTCCTGGTGAAGCAGGGT GAGCTGAGCAACCACACGGTGGTGGCTGCGATGGCGGCGGTGGCGCAGTTCCCGGACCAT GTGCGGTGGATGTTCCGCCACCCCGTGAGCGCGCACGTGGGCAAGAGGGAGAGGTCTCAG GGCTGCTACCGAGTGACGCTGCTGCACAATGGGTGGTGGCACACGTACCTTGTCGACGAC TACGTGCCTGCGTCGCTGAGAGGACCGCTGTTTGCGAGCTGTGCCGAGGACCCGCGCCGA CTGTGGGTGCAGCTGCTCGAAAAGGCGTATGCCAAGTCGCTTGGCTCATACGCGGCGACG TGCCTCGTCGACGCCATGGAGGCCCTCGGCGACTTCACTGGATTCCCTGTACGCTTTCTC GACTCCTTGTGGGCGGCCGCCGCGCAGAACCCGAGGGACGACGCGTTCCGGTCGCTCTTT CGCTACCTCGAGCGGAGTGTACGGGCCGGCTGCACGGTACTCCTCTTCTCCCCGGCCCCC ACCGACGAGCAGTCGAGTGCGACCGTGGACATGTCCCGCAAGCGCTCCTCGCGTATCATG CCGGTGAAAGGCGCGGTGCCGCAGTTCCTGCCCGGCCACATCTACTTCCTGCGCGACGTC GCCTTCTACAAGGAGCTGGATCTGCGCATGGTGCAGCTGAAGAACCCGTGGACGTGGGAG ACGAAAAACAAGATCCACTACGAGAAGAAGTGGAAGTACACAACGTGGTACGACCAGCCC GACCCTAGCCTCAGTGCCATTGCGTCCACCACGGCGAGCCTGCACGGGCAGGTGTCCTCC CGCGTTCTGGCCTCGCACGCGCTCAACCCCAGAGCCGGCGCGGCGTTGTCACCGGAGGCG GTCGCTCTAAACGAACGCAAGGGCACGATGTGGGTGGAGTGGGGGGAGGCGCTGGCAGCA TTTGCAGGCGGCGGCGTGTGCTACACCATGTGGGACCGACACCGGTACCAGGTGCGGAAT GCCTTTGTGGAGGGCCGACCGCGGCTGGTCCTTGAGCTCAGGGCGCGGCGCGCGGTGGAG CTGCTCGTGACACTTTCGCTGGAGACGGTGAGCGAGACGCTCGACAACTTTGGCACCGTC GTCGCGGCCCGTCCCATCCCGCTTCACGGCACAGCCCTCTCGGTGGTGCACCGACAGGCG AATCAGTCGGCGAAGGTGGTTCGCGAGTCCTGTGACGATATCGAGAGCGTGACAGGCTGC CGAACGTACGTCGTGGCCCGTGATGTGTCCATAAAGGTGGTCGTCGATCCGAGCACGAGC AGCAACGGCGCCTCCGTATTGGTTGTCCCTCTGCTAGATCCAACCGCAGTTAGCGCTGCC GCCGTTGGCGCGAGTAGTGGATCCTCCTCGAACGCAGCCTCGACAGCCGCTGCGGCCGAG GTGCGCTTTGTCGTGTCCATCGTCAGCGATGCCGTTGCGGGAGATGGGGAGGATTTGTCC ATTCACTTTGTGTCCCTGCGGCGCAGCTGCGGCGTCTTCACAGACTCTACCGCGGCGTTC CCGCTGGAGGGCTCCTCGCGCATGACAGCACAGTACCAAGTGTGCACCAAGGAAGGCGTT GCGACGTGCGAGGGGTCTCGCATCTCTGGCAACGAAACGAAGAGTATGTGA
  • Download Fasta

  • Fasta :-

    MSGTKAAITESSASLAADSVVPEERPETRQYGLTDNLHISPANRMAAEKLVAFVCAVSDP EVLHVIYDYLEEHQKAVPRYRLATKACRELLERKEEMLTACLSTSGGAHELKQPSVAGTR RSRSVSVPQLVDSPEKKAETARAGKGLTEAQRLLQQIAETDGCDKGDDDDADMDEFDDLN YFSAPYTPSSRFSFGQPSVSGLVTRVFSEGMLYKIKTPKGEYHFYNDTLQEVMVVRVQCH LRGNEKINERAMLSSVAGTGETEITIAVLPEETNFFMSGVAHMPHFMAKRVPVPCDYVSP SVTQSLRKISAGINAVRKALGKWSRASDQQAYLKCCLQNNLRFTDLNFRPSSESLCRPEF DAVVIPAVTWRRPEEYIYLAEVSQTRLFRGEISCFLVKQGELSNHTVVAAMAAVAQFPDH VRWMFRHPVSAHVGKRERSQGCYRVTLLHNGWWHTYLVDDYVPASLRGPLFASCAEDPRR LWVQLLEKAYAKSLGSYAATCLVDAMEALGDFTGFPVRFLDSLWAAAAQNPRDDAFRSLF RYLERSVRAGCTVLLFSPAPTDEQSSATVDMSRKRSSRIMPVKGAVPQFLPGHIYFLRDV AFYKELDLRMVQLKNPWTWETKNKIHYEKKWKYTTWYDQPDPSLSAIASTTASLHGQVSS RVLASHALNPRAGAALSPEAVALNERKGTMWVEWGEALAAFAGGGVCYTMWDRHRYQVRN AFVEGRPRLVLELRARRAVELLVTLSLETVSETLDNFGTVVAARPIPLHGTALSVVHRQA NQSAKVVRESCDDIESVTGCRTYVVARDVSIKVVVDPSTSSNGASVLVVPLLDPTAVSAA AVGASSGSSSNAASTAAAAEVRFVVSIVSDAVAGDGEDLSIHFVSLRRSCGVFTDSTAAF PLEGSSRMTAQYQVCTKEGVATCEGSRISGNETKSM

  • title: catalytic site
  • coordinates: H405,H593,N615
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.30.0400133 SQLVDSPEKK0.991unspLmxM.30.0400133 SQLVDSPEKK0.991unspLmxM.30.0400133 SQLVDSPEKK0.991unspLmxM.30.0400351 SNFRPSSESL0.992unspLmxM.30.0400439 SKRERSQGCY0.993unspLmxM.30.0400572 STVDMSRKRS0.996unspLmxM.30.0400576 SSRKRSSRIM0.992unspLmxM.30.0400577 SRKRSSRIMP0.997unspLmxM.30.0400790 SVVRESCDDI0.998unspLmxM.30.0400929 SGSRISGNET0.996unspLmxM.30.0400124 SRRSRSVSVP0.993unspLmxM.30.0400126 SSRSVSVPQL0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India