LmxM.30.0460 | cysteine peptidase, Clan CA, family C2, putative

_IDPredictionOTHERSPmTPCS_Position
LmxM.30.0460OTHER0.9993520.0005190.000129
No Results

  • Fasta :-

    >LmxM.30.0460 MALCGGSRTKSKAREHDDQRKVHDFKYGGPAVTGDCYPLFEDGRCYRVEVDRHKWFLYND SLDMEMHVSFTFQKTTAVYKTEHGRTTVRKTPTGGTQCSVVVYPLETLPYVKVTKRTQIL YSAACVSRDLAPGYIEKVNREAKAKCMHETQKVAGVAGVSHNEEEILCRCRKSKILYIDM GFPPSEAALKRPHDKQSVASMHAIAWRRPQDYLPAIAHEEIKLFRHGVSAAGIGQGHLGD CWLMCSIAVVAESTTMVKDIFRHPVSQSRREKEERAGGYRVCISKNGWFHHIIVDSYLPT YNGVVYFARSTGDPYELWVSLLEKAYAKLHGSYASIVGGNPLHALQDLTGFPVYSFTNTW RAAANEEAVASQFFKDLLRYRKNGYLISISTPGTDTSAYNAGSGNANEASLAARYKTAGL STGHSYSVLMVRQFVIPRVKLLKIRNPWGSGDEWTGAWGKNSTGWQKHSLVRRSCKPSKV SDGTFWMEWRDAVQFFEGGGVCMVKKAWYQYRFPGQFIGIIPSVVLKIELRKKQKLLFTL SQKDRRLQNPDDPDQLYKGLLISVTGHNAQKGTQQIVALSTDNPEVHPPEKYEYIVARDV GLELELDPTKGPFYVIPRIMTTNQNGPKDFTLGMLAPNKSTARGLRVSFVHLPDTCPTFR NVVSFPMNGEAATHVRSQYKKRGGAPRVKAGITVFDATHVTETYLHPQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/115 Sequence name : 115 Sequence length : 708 VALUES OF COMPUTED PARAMETERS Coef20 : 3.746 CoefTot : 0.172 ChDiff : 27 ZoneTo : 14 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.471 1.524 0.262 0.543 MesoH : -0.276 0.201 -0.356 0.267 MuHd_075 : 15.565 2.105 1.469 2.735 MuHd_095 : 13.580 2.848 1.493 2.667 MuHd_100 : 19.381 5.530 1.940 4.142 MuHd_105 : 23.103 8.213 3.263 4.996 Hmax_075 : -12.075 -4.100 -3.386 -0.957 Hmax_095 : -2.100 -2.363 -3.137 1.304 Hmax_100 : -3.000 -1.100 -3.721 0.850 Hmax_105 : 6.067 3.617 -1.114 2.765 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9231 0.0769 DFMC : 0.8824 0.1176
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 708 LmxM.30.0460 MALCGGSRTKSKAREHDDQRKVHDFKYGGPAVTGDCYPLFEDGRCYRVEVDRHKWFLYNDSLDMEMHVSFTFQKTTAVYK 80 TEHGRTTVRKTPTGGTQCSVVVYPLETLPYVKVTKRTQILYSAACVSRDLAPGYIEKVNREAKAKCMHETQKVAGVAGVS 160 HNEEEILCRCRKSKILYIDMGFPPSEAALKRPHDKQSVASMHAIAWRRPQDYLPAIAHEEIKLFRHGVSAAGIGQGHLGD 240 CWLMCSIAVVAESTTMVKDIFRHPVSQSRREKEERAGGYRVCISKNGWFHHIIVDSYLPTYNGVVYFARSTGDPYELWVS 320 LLEKAYAKLHGSYASIVGGNPLHALQDLTGFPVYSFTNTWRAAANEEAVASQFFKDLLRYRKNGYLISISTPGTDTSAYN 400 AGSGNANEASLAARYKTAGLSTGHSYSVLMVRQFVIPRVKLLKIRNPWGSGDEWTGAWGKNSTGWQKHSLVRRSCKPSKV 480 SDGTFWMEWRDAVQFFEGGGVCMVKKAWYQYRFPGQFIGIIPSVVLKIELRKKQKLLFTLSQKDRRLQNPDDPDQLYKGL 560 LISVTGHNAQKGTQQIVALSTDNPEVHPPEKYEYIVARDVGLELELDPTKGPFYVIPRIMTTNQNGPKDFTLGMLAPNKS 640 TARGLRVSFVHLPDTCPTFRNVVSFPMNGEAATHVRSQYKKRGGAPRVKAGITVFDATHVTETYLHPQ 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .................................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.30.0460 8 ALCGGSR|TK 0.090 . LmxM.30.0460 10 CGGSRTK|SK 0.078 . LmxM.30.0460 12 GSRTKSK|AR 0.075 . LmxM.30.0460 14 RTKSKAR|EH 0.149 . LmxM.30.0460 20 REHDDQR|KV 0.127 . LmxM.30.0460 21 EHDDQRK|VH 0.073 . LmxM.30.0460 26 RKVHDFK|YG 0.092 . LmxM.30.0460 44 PLFEDGR|CY 0.082 . LmxM.30.0460 47 EDGRCYR|VE 0.165 . LmxM.30.0460 52 YRVEVDR|HK 0.091 . LmxM.30.0460 54 VEVDRHK|WF 0.056 . LmxM.30.0460 74 VSFTFQK|TT 0.064 . LmxM.30.0460 80 KTTAVYK|TE 0.058 . LmxM.30.0460 85 YKTEHGR|TT 0.098 . LmxM.30.0460 89 HGRTTVR|KT 0.105 . LmxM.30.0460 90 GRTTVRK|TP 0.109 . LmxM.30.0460 112 ETLPYVK|VT 0.053 . LmxM.30.0460 115 PYVKVTK|RT 0.062 . LmxM.30.0460 116 YVKVTKR|TQ 0.108 . LmxM.30.0460 128 SAACVSR|DL 0.149 . LmxM.30.0460 137 APGYIEK|VN 0.061 . LmxM.30.0460 140 YIEKVNR|EA 0.125 . LmxM.30.0460 143 KVNREAK|AK 0.241 . LmxM.30.0460 145 NREAKAK|CM 0.082 . LmxM.30.0460 152 CMHETQK|VA 0.092 . LmxM.30.0460 169 EEEILCR|CR 0.077 . LmxM.30.0460 171 EILCRCR|KS 0.070 . LmxM.30.0460 172 ILCRCRK|SK 0.357 . LmxM.30.0460 174 CRCRKSK|IL 0.167 . LmxM.30.0460 190 PSEAALK|RP 0.060 . LmxM.30.0460 191 SEAALKR|PH 0.259 . LmxM.30.0460 195 LKRPHDK|QS 0.086 . LmxM.30.0460 207 MHAIAWR|RP 0.107 . LmxM.30.0460 208 HAIAWRR|PQ 0.117 . LmxM.30.0460 222 IAHEEIK|LF 0.070 . LmxM.30.0460 225 EEIKLFR|HG 0.077 . LmxM.30.0460 258 ESTTMVK|DI 0.070 . LmxM.30.0460 262 MVKDIFR|HP 0.073 . LmxM.30.0460 269 HPVSQSR|RE 0.080 . LmxM.30.0460 270 PVSQSRR|EK 0.167 . LmxM.30.0460 272 SQSRREK|EE 0.199 . LmxM.30.0460 275 RREKEER|AG 0.108 . LmxM.30.0460 280 ERAGGYR|VC 0.087 . LmxM.30.0460 285 YRVCISK|NG 0.058 . LmxM.30.0460 309 GVVYFAR|ST 0.191 . LmxM.30.0460 324 WVSLLEK|AY 0.068 . LmxM.30.0460 328 LEKAYAK|LH 0.063 . LmxM.30.0460 361 SFTNTWR|AA 0.119 . LmxM.30.0460 375 VASQFFK|DL 0.091 . LmxM.30.0460 379 FFKDLLR|YR 0.073 . LmxM.30.0460 381 KDLLRYR|KN 0.087 . LmxM.30.0460 382 DLLRYRK|NG 0.104 . LmxM.30.0460 414 EASLAAR|YK 0.182 . LmxM.30.0460 416 SLAARYK|TA 0.092 . LmxM.30.0460 432 YSVLMVR|QF 0.073 . LmxM.30.0460 438 RQFVIPR|VK 0.070 . LmxM.30.0460 440 FVIPRVK|LL 0.057 . LmxM.30.0460 443 PRVKLLK|IR 0.065 . LmxM.30.0460 445 VKLLKIR|NP 0.090 . LmxM.30.0460 460 WTGAWGK|NS 0.066 . LmxM.30.0460 467 NSTGWQK|HS 0.058 . LmxM.30.0460 472 QKHSLVR|RS 0.078 . LmxM.30.0460 473 KHSLVRR|SC 0.390 . LmxM.30.0460 476 LVRRSCK|PS 0.177 . LmxM.30.0460 479 RSCKPSK|VS 0.075 . LmxM.30.0460 490 TFWMEWR|DA 0.144 . LmxM.30.0460 505 GGVCMVK|KA 0.069 . LmxM.30.0460 506 GVCMVKK|AW 0.136 . LmxM.30.0460 512 KAWYQYR|FP 0.174 . LmxM.30.0460 527 IPSVVLK|IE 0.063 . LmxM.30.0460 531 VLKIELR|KK 0.083 . LmxM.30.0460 532 LKIELRK|KQ 0.065 . LmxM.30.0460 533 KIELRKK|QK 0.074 . LmxM.30.0460 535 ELRKKQK|LL 0.065 . LmxM.30.0460 543 LFTLSQK|DR 0.059 . LmxM.30.0460 545 TLSQKDR|RL 0.092 . LmxM.30.0460 546 LSQKDRR|LQ 0.115 . LmxM.30.0460 558 DPDQLYK|GL 0.069 . LmxM.30.0460 571 TGHNAQK|GT 0.081 . LmxM.30.0460 591 EVHPPEK|YE 0.067 . LmxM.30.0460 598 YEYIVAR|DV 0.265 . LmxM.30.0460 610 LELDPTK|GP 0.062 . LmxM.30.0460 618 PFYVIPR|IM 0.089 . LmxM.30.0460 628 TNQNGPK|DF 0.079 . LmxM.30.0460 639 GMLAPNK|ST 0.088 . LmxM.30.0460 643 PNKSTAR|GL 0.124 . LmxM.30.0460 646 STARGLR|VS 0.237 . LmxM.30.0460 660 DTCPTFR|NV 0.090 . LmxM.30.0460 676 EAATHVR|SQ 0.170 . LmxM.30.0460 680 HVRSQYK|KR 0.076 . LmxM.30.0460 681 VRSQYKK|RG 0.134 . LmxM.30.0460 682 RSQYKKR|GG 0.253 . LmxM.30.0460 687 KRGGAPR|VK 0.103 . LmxM.30.0460 689 GGAPRVK|AG 0.070 . ____________________________^_________________

  • Fasta :-

    >LmxM.30.0460 ATGGCGCTCTGCGGTGGTAGCCGCACCAAGAGCAAGGCAAGGGAACACGATGACCAGAGG AAGGTGCACGACTTCAAGTATGGCGGCCCTGCGGTCACGGGGGACTGCTACCCCCTCTTT GAAGACGGCCGATGCTACCGGGTGGAGGTGGACAGGCACAAGTGGTTCCTCTACAACGAC TCGCTGGACATGGAGATGCACGTCAGCTTCACCTTCCAAAAAACGACGGCCGTTTACAAA ACAGAGCATGGCCGGACGACGGTGAGGAAGACGCCCACCGGGGGGACACAGTGCTCCGTC GTCGTCTACCCGCTGGAGACGCTGCCGTACGTGAAGGTCACCAAGAGGACGCAGATCTTA TACAGCGCCGCGTGCGTGTCGCGCGACTTGGCCCCGGGCTACATTGAGAAGGTTAACCGC GAGGCGAAGGCGAAGTGCATGCACGAGACGCAAAAGGTGGCCGGCGTGGCTGGGGTGAGC CACAACGAGGAGGAAATCCTGTGCAGGTGCCGGAAGAGCAAGATCCTATACATCGACATG GGCTTCCCCCCATCCGAGGCGGCTCTGAAGCGACCTCACGACAAGCAGAGCGTGGCAAGC ATGCACGCCATCGCGTGGAGACGGCCGCAGGACTACCTACCGGCGATAGCGCACGAGGAG ATCAAGCTGTTCCGTCACGGCGTGAGCGCTGCCGGCATTGGGCAGGGTCACCTCGGCGAC TGCTGGCTCATGTGCTCGATCGCGGTCGTGGCGGAGAGCACGACGATGGTGAAGGACATC TTTCGCCACCCCGTCTCCCAGTCGAGGCGAGAGAAAGAGGAGCGGGCGGGCGGCTACCGC GTGTGCATCAGTAAGAACGGCTGGTTCCACCACATCATTGTCGACAGCTACCTGCCGACG TACAACGGGGTCGTTTACTTTGCCCGCTCCACCGGTGACCCGTACGAGCTGTGGGTGTCG CTGCTGGAGAAGGCGTATGCCAAGCTGCACGGCTCGTACGCGTCCATTGTCGGCGGCAAT CCTCTGCACGCCCTGCAGGATTTGACGGGGTTTCCGGTGTACTCCTTCACAAATACGTGG AGGGCAGCGGCGAATGAGGAGGCGGTCGCATCTCAGTTTTTCAAGGACCTGCTGCGCTAC CGCAAGAATGGCTACCTCATCTCGATCAGCACTCCAGGCACGGACACGAGCGCGTACAAC GCTGGTAGCGGGAATGCGAACGAGGCATCACTTGCGGCGCGCTACAAGACGGCGGGCCTG AGCACCGGCCACTCCTACTCGGTGCTGATGGTGCGCCAGTTTGTCATTCCGCGAGTGAAG CTGCTGAAGATACGCAACCCGTGGGGAAGCGGTGACGAGTGGACCGGCGCATGGGGCAAG AACAGCACCGGGTGGCAGAAGCACTCCTTGGTGCGCCGGTCGTGCAAGCCGAGCAAGGTG AGCGATGGCACTTTCTGGATGGAGTGGAGGGACGCGGTGCAGTTCTTTGAGGGTGGCGGG GTCTGCATGGTGAAGAAGGCCTGGTACCAGTATCGCTTCCCGGGCCAGTTCATTGGCATA ATCCCGTCCGTCGTGCTAAAGATCGAACTCAGGAAGAAGCAGAAACTACTCTTCACCCTG TCACAGAAGGACCGCCGCCTGCAGAACCCCGACGACCCGGATCAGCTGTACAAGGGGCTG CTTATCTCCGTCACGGGGCACAACGCGCAGAAGGGCACGCAGCAGATTGTGGCCCTCAGC ACCGATAACCCCGAGGTGCATCCACCAGAGAAGTACGAGTACATTGTTGCCCGCGACGTT GGCCTCGAGCTCGAGCTCGACCCCACAAAAGGCCCCTTCTACGTCATTCCGCGCATCATG ACGACGAACCAAAACGGCCCGAAGGACTTCACACTGGGCATGCTGGCACCCAACAAGTCA ACCGCAAGAGGACTGCGGGTGTCTTTTGTACACCTGCCCGACACGTGCCCGACGTTCCGC AACGTGGTGTCATTCCCAATGAACGGGGAGGCGGCGACACATGTGCGATCTCAGTACAAG AAGCGCGGCGGTGCGCCCCGCGTAAAGGCGGGCATCACCGTCTTTGACGCCACCCACGTG ACGGAGACGTACCTCCACCCCCAATAA
  • Download Fasta

  • Fasta :-

    MALCGGSRTKSKAREHDDQRKVHDFKYGGPAVTGDCYPLFEDGRCYRVEVDRHKWFLYND SLDMEMHVSFTFQKTTAVYKTEHGRTTVRKTPTGGTQCSVVVYPLETLPYVKVTKRTQIL YSAACVSRDLAPGYIEKVNREAKAKCMHETQKVAGVAGVSHNEEEILCRCRKSKILYIDM GFPPSEAALKRPHDKQSVASMHAIAWRRPQDYLPAIAHEEIKLFRHGVSAAGIGQGHLGD CWLMCSIAVVAESTTMVKDIFRHPVSQSRREKEERAGGYRVCISKNGWFHHIIVDSYLPT YNGVVYFARSTGDPYELWVSLLEKAYAKLHGSYASIVGGNPLHALQDLTGFPVYSFTNTW RAAANEEAVASQFFKDLLRYRKNGYLISISTPGTDTSAYNAGSGNANEASLAARYKTAGL STGHSYSVLMVRQFVIPRVKLLKIRNPWGSGDEWTGAWGKNSTGWQKHSLVRRSCKPSKV SDGTFWMEWRDAVQFFEGGGVCMVKKAWYQYRFPGQFIGIIPSVVLKIELRKKQKLLFTL SQKDRRLQNPDDPDQLYKGLLISVTGHNAQKGTQQIVALSTDNPEVHPPEKYEYIVARDV GLELELDPTKGPFYVIPRIMTTNQNGPKDFTLGMLAPNKSTARGLRVSFVHLPDTCPTFR NVVSFPMNGEAATHVRSQYKKRGGAPRVKAGITVFDATHVTETYLHPQ

  • title: catalytic site
  • coordinates: C241,H424,N446
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.30.0460474 SLVRRSCKPS0.997unspLmxM.30.0460474 SLVRRSCKPS0.997unspLmxM.30.0460474 SLVRRSCKPS0.997unspLmxM.30.046087 THGRTTVRKT0.996unspLmxM.30.0460310 SYFARSTGDP0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India