LmxM.30.3090 | peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
LmxM.30.3090OTHER0.9932140.0017800.005006
No Results

  • Fasta :-

    >LmxM.30.3090 MTSVAQHIITPAVIRAKYSGYVLSNGVKCVVVQDANAKMPAAAMCIRAGQLNDPVELPGL AHFCEHMLFMGTEKFPKEDEFDSFVSKASGLTNAFTEGCDTVYYFSVSDGSLEGALERFV EFFAAPSFSPGAVAREVNAVHSEDEKNHNNDYWRLDELIRDFCNPKHPRSRYGNGNLTTL RDEPQRRGIDVRESLKTFHSRYYLADGATIVVVSTRPADEVLGLIEGPLARMKQGAVPRF SFLEAGEHLFTSAALGSWTNVRTVRKMRELRLMWAVRSPSSAWRTTPSAYIAHLLGHECD TSVLGVLKKRNWATGMVAGAHRVDDDFEVLEASVTLTVEGFRNALKVVDLLYQGIGQSIA HGVDAEVYKGMKAEERLFFESVDAGAPANHCVTLAQNANATDLEHCWIGGSVVLEDDMEA VLTYVRQLTPQNCVTFMQWGDMPSDAVTGATPAEGNLVESHGKQHDAEDDEDSQGSEGES AEEAEQAGESNASAEELFLSLPAFAQVPVSMVSRFHKALYQTVRIPEEDVARWQSLISGP YPPELALPSTNPFIATDFTIYPPAAAEAVDEIASPHAVTYVRRDAGHHSTFKMALRCNVL SPVASASPLNRLYTRVMHGILSNAITEMAYYATLASLTNEVIFSETGLGFAVEGPSQKLY EFFFAVVRKGLSMEVLQGTAEEYATYLETGVQRLKNVGMGQPYKVLHETQKKATRHTYYL FSEMLACESAATYEGYCTFVKQYLESGLLLECFVAGNVLSTQDVREMLVGQLENLLETLT IPIPLKDTIPRVRDTYGPRAGDGKANESVLSTFDVLSMPPSNPADPNAAVVVDVIIGEAT PRVMALTDTAMKLISSSFFNVLRTREALGYIVFAQRSVDYCTAHTLFVVQSALKDVDCVY LLSRIVAFFSAVEARLDTLCSAEEVEKVKRGLIAALEKMPDSVEGDVQRLEGEYLSLSKF ESRQRTIAALLTITAEDVKSHLRKFVLNSRSDSRALALCINNARTAATDVFAEPGNRRVP LPRVRSRQEDSDDASDDASEDTETLTLPTFLDGGSCVEITSYASALDYQHGLSVLKCNTY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/142 Sequence name : 142 Sequence length : 1080 VALUES OF COMPUTED PARAMETERS Coef20 : 4.176 CoefTot : -1.134 ChDiff : -45 ZoneTo : 52 KR : 5 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.618 1.747 0.154 0.572 MesoH : -0.055 0.757 -0.230 0.285 MuHd_075 : 28.105 25.817 8.908 6.915 MuHd_095 : 27.604 20.763 8.367 5.982 MuHd_100 : 23.865 16.229 7.326 4.834 MuHd_105 : 29.384 21.988 8.669 6.816 Hmax_075 : 8.700 24.400 2.765 7.760 Hmax_095 : 14.800 21.613 3.548 5.800 Hmax_100 : 13.800 17.000 3.094 5.320 Hmax_105 : 13.200 15.300 4.179 5.075 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6478 0.3522 DFMC : 0.4552 0.5448 This protein is probably imported in mitochondria. f(Ser) = 0.0577 f(Arg) = 0.0385 CMi = 0.46584 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1080 LmxM.30.3090 MTSVAQHIITPAVIRAKYSGYVLSNGVKCVVVQDANAKMPAAAMCIRAGQLNDPVELPGLAHFCEHMLFMGTEKFPKEDE 80 FDSFVSKASGLTNAFTEGCDTVYYFSVSDGSLEGALERFVEFFAAPSFSPGAVAREVNAVHSEDEKNHNNDYWRLDELIR 160 DFCNPKHPRSRYGNGNLTTLRDEPQRRGIDVRESLKTFHSRYYLADGATIVVVSTRPADEVLGLIEGPLARMKQGAVPRF 240 SFLEAGEHLFTSAALGSWTNVRTVRKMRELRLMWAVRSPSSAWRTTPSAYIAHLLGHECDTSVLGVLKKRNWATGMVAGA 320 HRVDDDFEVLEASVTLTVEGFRNALKVVDLLYQGIGQSIAHGVDAEVYKGMKAEERLFFESVDAGAPANHCVTLAQNANA 400 TDLEHCWIGGSVVLEDDMEAVLTYVRQLTPQNCVTFMQWGDMPSDAVTGATPAEGNLVESHGKQHDAEDDEDSQGSEGES 480 AEEAEQAGESNASAEELFLSLPAFAQVPVSMVSRFHKALYQTVRIPEEDVARWQSLISGPYPPELALPSTNPFIATDFTI 560 YPPAAAEAVDEIASPHAVTYVRRDAGHHSTFKMALRCNVLSPVASASPLNRLYTRVMHGILSNAITEMAYYATLASLTNE 640 VIFSETGLGFAVEGPSQKLYEFFFAVVRKGLSMEVLQGTAEEYATYLETGVQRLKNVGMGQPYKVLHETQKKATRHTYYL 720 FSEMLACESAATYEGYCTFVKQYLESGLLLECFVAGNVLSTQDVREMLVGQLENLLETLTIPIPLKDTIPRVRDTYGPRA 800 GDGKANESVLSTFDVLSMPPSNPADPNAAVVVDVIIGEATPRVMALTDTAMKLISSSFFNVLRTREALGYIVFAQRSVDY 880 CTAHTLFVVQSALKDVDCVYLLSRIVAFFSAVEARLDTLCSAEEVEKVKRGLIAALEKMPDSVEGDVQRLEGEYLSLSKF 960 ESRQRTIAALLTITAEDVKSHLRKFVLNSRSDSRALALCINNARTAATDVFAEPGNRRVPLPRVRSRQEDSDDASDDASE 1040 DTETLTLPTFLDGGSCVEITSYASALDYQHGLSVLKCNTY 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ........................................ 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.30.3090 15 ITPAVIR|AK 0.085 . LmxM.30.3090 17 PAVIRAK|YS 0.087 . LmxM.30.3090 28 VLSNGVK|CV 0.073 . LmxM.30.3090 38 VQDANAK|MP 0.063 . LmxM.30.3090 47 AAAMCIR|AG 0.079 . LmxM.30.3090 74 LFMGTEK|FP 0.065 . LmxM.30.3090 77 GTEKFPK|ED 0.060 . LmxM.30.3090 87 FDSFVSK|AS 0.075 . LmxM.30.3090 118 LEGALER|FV 0.109 . LmxM.30.3090 135 SPGAVAR|EV 0.262 . LmxM.30.3090 146 VHSEDEK|NH 0.057 . LmxM.30.3090 154 HNNDYWR|LD 0.100 . LmxM.30.3090 160 RLDELIR|DF 0.080 . LmxM.30.3090 166 RDFCNPK|HP 0.060 . LmxM.30.3090 169 CNPKHPR|SR 0.146 . LmxM.30.3090 171 PKHPRSR|YG 0.129 . LmxM.30.3090 181 GNLTTLR|DE 0.079 . LmxM.30.3090 186 LRDEPQR|RG 0.095 . LmxM.30.3090 187 RDEPQRR|GI 0.207 . LmxM.30.3090 192 RRGIDVR|ES 0.114 . LmxM.30.3090 196 DVRESLK|TF 0.055 . LmxM.30.3090 201 LKTFHSR|YY 0.121 . LmxM.30.3090 216 IVVVSTR|PA 0.147 . LmxM.30.3090 231 IEGPLAR|MK 0.103 . LmxM.30.3090 233 GPLARMK|QG 0.062 . LmxM.30.3090 239 KQGAVPR|FS 0.109 . LmxM.30.3090 262 GSWTNVR|TV 0.132 . LmxM.30.3090 265 TNVRTVR|KM 0.242 . LmxM.30.3090 266 NVRTVRK|MR 0.085 . LmxM.30.3090 268 RTVRKMR|EL 0.224 . LmxM.30.3090 271 RKMRELR|LM 0.265 . LmxM.30.3090 277 RLMWAVR|SP 0.157 . LmxM.30.3090 284 SPSSAWR|TT 0.111 . LmxM.30.3090 308 SVLGVLK|KR 0.061 . LmxM.30.3090 309 VLGVLKK|RN 0.097 . LmxM.30.3090 310 LGVLKKR|NW 0.201 . LmxM.30.3090 322 MVAGAHR|VD 0.098 . LmxM.30.3090 342 LTVEGFR|NA 0.084 . LmxM.30.3090 346 GFRNALK|VV 0.072 . LmxM.30.3090 369 VDAEVYK|GM 0.086 . LmxM.30.3090 372 EVYKGMK|AE 0.059 . LmxM.30.3090 376 GMKAEER|LF 0.093 . LmxM.30.3090 426 AVLTYVR|QL 0.075 . LmxM.30.3090 463 LVESHGK|QH 0.068 . LmxM.30.3090 514 PVSMVSR|FH 0.117 . LmxM.30.3090 517 MVSRFHK|AL 0.249 . LmxM.30.3090 524 ALYQTVR|IP 0.086 . LmxM.30.3090 532 PEEDVAR|WQ 0.084 . LmxM.30.3090 582 HAVTYVR|RD 0.079 . LmxM.30.3090 583 AVTYVRR|DA 0.279 . LmxM.30.3090 592 GHHSTFK|MA 0.067 . LmxM.30.3090 596 TFKMALR|CN 0.079 . LmxM.30.3090 611 SASPLNR|LY 0.133 . LmxM.30.3090 615 LNRLYTR|VM 0.101 . LmxM.30.3090 658 VEGPSQK|LY 0.061 . LmxM.30.3090 668 FFFAVVR|KG 0.066 . LmxM.30.3090 669 FFAVVRK|GL 0.133 . LmxM.30.3090 693 LETGVQR|LK 0.091 . LmxM.30.3090 695 TGVQRLK|NV 0.092 . LmxM.30.3090 704 GMGQPYK|VL 0.065 . LmxM.30.3090 711 VLHETQK|KA 0.071 . LmxM.30.3090 712 LHETQKK|AT 0.098 . LmxM.30.3090 715 TQKKATR|HT 0.103 . LmxM.30.3090 741 GYCTFVK|QY 0.059 . LmxM.30.3090 765 LSTQDVR|EM 0.072 . LmxM.30.3090 786 TIPIPLK|DT 0.073 . LmxM.30.3090 791 LKDTIPR|VR 0.093 . LmxM.30.3090 793 DTIPRVR|DT 0.098 . LmxM.30.3090 799 RDTYGPR|AG 0.087 . LmxM.30.3090 804 PRAGDGK|AN 0.092 . LmxM.30.3090 842 IGEATPR|VM 0.070 . LmxM.30.3090 852 LTDTAMK|LI 0.066 . LmxM.30.3090 863 SFFNVLR|TR 0.089 . LmxM.30.3090 865 FNVLRTR|EA 0.087 . LmxM.30.3090 876 YIVFAQR|SV 0.178 . LmxM.30.3090 894 VVQSALK|DV 0.076 . LmxM.30.3090 904 CVYLLSR|IV 0.079 . LmxM.30.3090 915 FSAVEAR|LD 0.086 . LmxM.30.3090 927 SAEEVEK|VK 0.059 . LmxM.30.3090 929 EEVEKVK|RG 0.056 . LmxM.30.3090 930 EVEKVKR|GL 0.244 . LmxM.30.3090 938 LIAALEK|MP 0.071 . LmxM.30.3090 949 VEGDVQR|LE 0.096 . LmxM.30.3090 959 EYLSLSK|FE 0.061 . LmxM.30.3090 963 LSKFESR|QR 0.082 . LmxM.30.3090 965 KFESRQR|TI 0.086 . LmxM.30.3090 979 ITAEDVK|SH 0.064 . LmxM.30.3090 983 DVKSHLR|KF 0.062 . LmxM.30.3090 984 VKSHLRK|FV 0.201 . LmxM.30.3090 990 KFVLNSR|SD 0.105 . LmxM.30.3090 994 NSRSDSR|AL 0.088 . LmxM.30.3090 1004 LCINNAR|TA 0.091 . LmxM.30.3090 1017 FAEPGNR|RV 0.067 . LmxM.30.3090 1018 AEPGNRR|VP 0.084 . LmxM.30.3090 1023 RRVPLPR|VR 0.132 . LmxM.30.3090 1025 VPLPRVR|SR 0.085 . LmxM.30.3090 1027 LPRVRSR|QE 0.101 . LmxM.30.3090 1076 HGLSVLK|CN 0.058 . ____________________________^_________________

  • Fasta :-

    >LmxM.30.3090 ATGACAAGCGTCGCCCAGCACATAATCACACCGGCGGTAATCCGCGCGAAGTACTCTGGC TATGTCCTGAGCAACGGCGTCAAATGCGTCGTCGTGCAGGATGCGAACGCGAAAATGCCG GCGGCGGCCATGTGCATCCGTGCAGGCCAGCTGAACGACCCTGTGGAGCTGCCTGGACTG GCGCACTTCTGCGAACACATGCTTTTCATGGGAACAGAGAAGTTCCCCAAGGAGGACGAG TTCGACAGTTTTGTGTCTAAAGCGAGCGGCCTCACCAACGCCTTCACCGAGGGTTGCGAT ACGGTGTACTACTTCAGCGTCAGCGATGGCAGCCTTGAGGGGGCGCTAGAGCGGTTTGTG GAGTTCTTCGCGGCTCCCAGCTTCAGTCCCGGCGCGGTGGCCCGGGAGGTGAACGCGGTG CACAGCGAGGACGAGAAGAACCACAATAACGACTACTGGCGTCTCGACGAGCTGATCCGT GACTTCTGCAACCCGAAGCACCCACGCAGCCGCTACGGCAATGGCAACCTCACCACCCTG CGGGACGAGCCGCAGCGGCGGGGAATCGACGTGCGCGAGTCGCTCAAAACGTTCCACTCC CGCTACTACTTGGCGGATGGGGCGACGATTGTGGTGGTGAGCACGCGACCAGCTGACGAG GTGCTAGGCCTCATCGAGGGGCCGCTCGCGCGGATGAAGCAGGGAGCCGTTCCGCGCTTT TCTTTTCTCGAGGCCGGCGAGCATCTGTTCACCAGTGCCGCGCTCGGCTCCTGGACCAAC GTGCGCACGGTGCGGAAGATGCGTGAGCTGCGGCTGATGTGGGCGGTGCGGTCGCCGTCG TCGGCGTGGCGCACAACGCCGTCGGCGTACATTGCCCACCTCCTCGGGCATGAGTGCGAC ACCTCCGTGCTCGGGGTGCTGAAGAAGCGCAATTGGGCGACAGGCATGGTGGCCGGCGCC CACCGTGTGGACGATGACTTTGAAGTCCTGGAAGCCTCTGTCACACTCACAGTAGAGGGG TTCCGGAACGCGCTGAAGGTAGTGGACCTGCTCTACCAGGGCATTGGCCAGTCGATTGCG CATGGCGTGGATGCTGAGGTGTACAAGGGGATGAAGGCCGAGGAGCGCCTCTTCTTTGAG AGCGTTGACGCTGGCGCGCCGGCGAACCACTGCGTCACGCTCGCACAGAACGCCAACGCT ACCGACCTGGAGCACTGCTGGATCGGCGGCAGCGTGGTGCTCGAGGACGATATGGAGGCG GTTCTGACCTATGTGCGTCAGCTGACACCGCAGAACTGCGTGACGTTCATGCAGTGGGGA GATATGCCGAGTGATGCAGTCACCGGCGCCACGCCAGCGGAGGGAAACCTCGTGGAGAGC CATGGAAAGCAGCACGACGCGGAGGATGACGAGGACAGCCAGGGTTCCGAGGGGGAGTCC GCAGAGGAGGCGGAGCAAGCGGGGGAGAGTAACGCGTCGGCTGAGGAGCTGTTTCTCTCG CTCCCGGCCTTCGCGCAGGTGCCGGTCAGCATGGTCTCGCGCTTCCACAAGGCGCTGTAC CAGACGGTCAGGATACCGGAGGAAGACGTGGCGCGGTGGCAGAGTCTCATCAGCGGCCCG TATCCGCCGGAGCTGGCGTTACCGTCCACGAATCCGTTCATTGCCACAGACTTCACAATT TACCCACCGGCCGCTGCGGAGGCGGTGGACGAGATCGCCTCCCCGCACGCCGTGACATAC GTCAGGAGGGATGCGGGCCACCACAGCACCTTCAAAATGGCGCTGCGGTGCAACGTTCTC TCACCCGTTGCGTCCGCGAGCCCGCTGAACCGGCTGTACACGCGCGTCATGCACGGCATA CTGTCCAACGCGATCACGGAGATGGCCTACTACGCAACGCTAGCGTCGCTCACTAACGAG GTGATCTTCTCGGAAACGGGGCTGGGCTTTGCAGTGGAGGGGCCGTCGCAGAAGCTGTAC GAGTTTTTCTTCGCCGTAGTGCGCAAGGGGCTGTCCATGGAGGTGCTCCAGGGTACTGCG GAGGAGTACGCGACGTACCTGGAGACAGGCGTGCAGAGGCTCAAGAACGTGGGGATGGGC CAGCCGTACAAGGTTCTCCACGAGACACAGAAGAAGGCGACTCGGCACACGTACTACTTG TTTAGCGAGATGCTTGCGTGCGAGTCTGCTGCCACGTACGAGGGCTACTGCACCTTTGTG AAGCAGTACTTGGAGAGCGGTCTCCTGCTCGAGTGCTTCGTTGCGGGGAACGTGCTTTCC ACACAGGATGTGCGCGAAATGCTGGTTGGTCAGCTGGAGAACCTCCTCGAAACCTTAACC ATTCCAATCCCGCTGAAGGACACCATTCCGCGTGTGCGCGACACATACGGCCCGCGTGCT GGAGATGGGAAAGCAAACGAGAGCGTGCTCTCCACCTTCGATGTTCTCTCAATGCCACCA TCGAACCCGGCCGACCCGAACGCGGCTGTTGTCGTCGACGTCATCATCGGCGAGGCCACT CCGCGTGTAATGGCACTCACAGACACCGCAATGAAGCTCATCAGCTCCTCTTTCTTCAAC GTGCTGCGCACGCGGGAGGCGTTGGGCTACATTGTGTTTGCCCAAAGAAGTGTCGACTAC TGCACAGCGCACACCCTCTTTGTGGTGCAGAGTGCGCTGAAGGATGTGGACTGCGTCTAC CTGCTCTCCCGCATCGTCGCCTTCTTCTCTGCCGTGGAGGCGCGGCTGGACACGTTATGC TCTGCTGAGGAGGTCGAGAAGGTGAAGAGGGGTCTGATTGCGGCTCTGGAGAAGATGCCC GACTCTGTCGAGGGCGATGTCCAGCGTCTTGAGGGTGAGTATCTCAGTCTGTCGAAGTTT GAAAGTCGCCAGCGGACGATTGCCGCCCTCTTGACCATCACTGCGGAGGATGTAAAGTCG CACCTCCGCAAGTTCGTCCTCAACAGCCGCAGTGACTCTCGTGCGTTGGCGCTGTGCATC AATAACGCTCGCACCGCTGCCACCGATGTGTTCGCTGAGCCAGGCAACCGTCGCGTTCCT CTGCCTCGCGTGCGGTCGAGGCAGGAGGACAGCGACGATGCGTCAGACGACGCATCCGAG GACACTGAGACGCTGACGCTGCCTACCTTTTTGGATGGCGGCAGCTGTGTCGAGATTACC TCTTATGCTTCTGCCCTCGACTATCAGCACGGGCTTTCCGTTCTCAAGTGCAACACCTAT TGA
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  • Fasta :-

    MTSVAQHIITPAVIRAKYSGYVLSNGVKCVVVQDANAKMPAAAMCIRAGQLNDPVELPGL AHFCEHMLFMGTEKFPKEDEFDSFVSKASGLTNAFTEGCDTVYYFSVSDGSLEGALERFV EFFAAPSFSPGAVAREVNAVHSEDEKNHNNDYWRLDELIRDFCNPKHPRSRYGNGNLTTL RDEPQRRGIDVRESLKTFHSRYYLADGATIVVVSTRPADEVLGLIEGPLARMKQGAVPRF SFLEAGEHLFTSAALGSWTNVRTVRKMRELRLMWAVRSPSSAWRTTPSAYIAHLLGHECD TSVLGVLKKRNWATGMVAGAHRVDDDFEVLEASVTLTVEGFRNALKVVDLLYQGIGQSIA HGVDAEVYKGMKAEERLFFESVDAGAPANHCVTLAQNANATDLEHCWIGGSVVLEDDMEA VLTYVRQLTPQNCVTFMQWGDMPSDAVTGATPAEGNLVESHGKQHDAEDDEDSQGSEGES AEEAEQAGESNASAEELFLSLPAFAQVPVSMVSRFHKALYQTVRIPEEDVARWQSLISGP YPPELALPSTNPFIATDFTIYPPAAAEAVDEIASPHAVTYVRRDAGHHSTFKMALRCNVL SPVASASPLNRLYTRVMHGILSNAITEMAYYATLASLTNEVIFSETGLGFAVEGPSQKLY EFFFAVVRKGLSMEVLQGTAEEYATYLETGVQRLKNVGMGQPYKVLHETQKKATRHTYYL FSEMLACESAATYEGYCTFVKQYLESGLLLECFVAGNVLSTQDVREMLVGQLENLLETLT IPIPLKDTIPRVRDTYGPRAGDGKANESVLSTFDVLSMPPSNPADPNAAVVVDVIIGEAT PRVMALTDTAMKLISSSFFNVLRTREALGYIVFAQRSVDYCTAHTLFVVQSALKDVDCVY LLSRIVAFFSAVEARLDTLCSAEEVEKVKRGLIAALEKMPDSVEGDVQRLEGEYLSLSKF ESRQRTIAALLTITAEDVKSHLRKFVLNSRSDSRALALCINNARTAATDVFAEPGNRRVP LPRVRSRQEDSDDASDDASEDTETLTLPTFLDGGSCVEITSYASALDYQHGLSVLKCNTY

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.30.3090476 SDSQGSEGES0.993unspLmxM.30.3090476 SDSQGSEGES0.993unspLmxM.30.3090476 SDSQGSEGES0.993unspLmxM.30.3090480 SSEGESAEEA0.997unspLmxM.30.3090493 SESNASAEEL0.996unspLmxM.30.3090942 SKMPDSVEGD0.993unspLmxM.30.3090989 SFVLNSRSDS0.992unspLmxM.30.3090106 SVYYFSVSDG0.991unspLmxM.30.3090194 SDVRESLKTF0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India