LmxM.31.1330 | PPPDE putative peptidase domain containing protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0005737      

  • Curated_GO_Components:  cytoplasm      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
LmxM.31.1330OTHER0.9992830.0000920.000625
No Results

  • Fasta :-

    >LmxM.31.1330 MTHTAEITRRAFHPALHEKMQHADPLQPSESMLLPSKTAPTALRKSDGSRLHLCVDKRAS QEKEDEEKNLALSLRITTKEVPSRTGVKAPQSSRHPSVRCVPVEATTCANRLLTNAPRKL CLSRVAALRPPNDASVPGAAVRDGQSFLVDKCKPTAIDMVVELHVYDLSHGYLKRYGKEL VGLEIPGVYHSGIVCYGVEVYFEGGIGIAAAGRTRFGTKYHTHYLGVTKKPVSEFFRWIG VRAVHVNQIHDYHPVRHNCHHFSYEAARFLLGENASIPNYLFSTVDNLVKTEAGASVAEV MTLTTHGMQSSVARQMRSRTLERQCSIDMQLSASTACGVMTLPPTAAVLFRPNDPYLAKR LVLDLSPYVKGLIKRNHMKPAALAVLEEMACALMEGTDSIAPKLLFNYVEMVTESLLRSP LVTWGPIFNGLRVAVLHKLCLINCVFHTKLMSILVLAARDFPRLLPDGRVELLRLACNFA CSAHGAIVYSETRYRDAWVSIVGLGLMDSSSTVVYTAACLALNVALAIVTTTNLPLRRDM TQLTDEHYALRLATLLLYNLRNRSAEKLPEPSFNMILMALYKLASSNKTALEYVVSHPFK PQYDELLNRCGSNESRTLVCLLKTLEDLFG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/121 Sequence name : 121 Sequence length : 630 VALUES OF COMPUTED PARAMETERS Coef20 : 3.910 CoefTot : -0.098 ChDiff : 15 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.735 2.276 0.377 0.701 MesoH : 0.153 0.912 -0.116 0.346 MuHd_075 : 25.754 20.074 6.775 6.730 MuHd_095 : 42.077 24.686 12.085 7.575 MuHd_100 : 38.275 23.073 11.507 6.953 MuHd_105 : 30.312 17.178 9.190 5.587 Hmax_075 : 6.400 6.475 -2.004 3.470 Hmax_095 : 15.500 13.300 2.389 4.840 Hmax_100 : 15.500 10.700 1.554 4.080 Hmax_105 : 3.238 5.833 -1.241 2.240 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7418 0.2582 DFMC : 0.8483 0.1517
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 630 LmxM.31.1330 MTHTAEITRRAFHPALHEKMQHADPLQPSESMLLPSKTAPTALRKSDGSRLHLCVDKRASQEKEDEEKNLALSLRITTKE 80 VPSRTGVKAPQSSRHPSVRCVPVEATTCANRLLTNAPRKLCLSRVAALRPPNDASVPGAAVRDGQSFLVDKCKPTAIDMV 160 VELHVYDLSHGYLKRYGKELVGLEIPGVYHSGIVCYGVEVYFEGGIGIAAAGRTRFGTKYHTHYLGVTKKPVSEFFRWIG 240 VRAVHVNQIHDYHPVRHNCHHFSYEAARFLLGENASIPNYLFSTVDNLVKTEAGASVAEVMTLTTHGMQSSVARQMRSRT 320 LERQCSIDMQLSASTACGVMTLPPTAAVLFRPNDPYLAKRLVLDLSPYVKGLIKRNHMKPAALAVLEEMACALMEGTDSI 400 APKLLFNYVEMVTESLLRSPLVTWGPIFNGLRVAVLHKLCLINCVFHTKLMSILVLAARDFPRLLPDGRVELLRLACNFA 480 CSAHGAIVYSETRYRDAWVSIVGLGLMDSSSTVVYTAACLALNVALAIVTTTNLPLRRDMTQLTDEHYALRLATLLLYNL 560 RNRSAEKLPEPSFNMILMALYKLASSNKTALEYVVSHPFKPQYDELLNRCGSNESRTLVCLLKTLEDLFG 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...................................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.31.1330 9 HTAEITR|RA 0.083 . LmxM.31.1330 10 TAEITRR|AF 0.239 . LmxM.31.1330 19 HPALHEK|MQ 0.081 . LmxM.31.1330 37 SMLLPSK|TA 0.065 . LmxM.31.1330 44 TAPTALR|KS 0.097 . LmxM.31.1330 45 APTALRK|SD 0.114 . LmxM.31.1330 50 RKSDGSR|LH 0.083 . LmxM.31.1330 57 LHLCVDK|RA 0.073 . LmxM.31.1330 58 HLCVDKR|AS 0.249 . LmxM.31.1330 63 KRASQEK|ED 0.083 . LmxM.31.1330 68 EKEDEEK|NL 0.062 . LmxM.31.1330 75 NLALSLR|IT 0.124 . LmxM.31.1330 79 SLRITTK|EV 0.075 . LmxM.31.1330 84 TKEVPSR|TG 0.098 . LmxM.31.1330 88 PSRTGVK|AP 0.062 . LmxM.31.1330 94 KAPQSSR|HP 0.072 . LmxM.31.1330 99 SRHPSVR|CV 0.224 . LmxM.31.1330 111 ATTCANR|LL 0.075 . LmxM.31.1330 118 LLTNAPR|KL 0.084 . LmxM.31.1330 119 LTNAPRK|LC 0.072 . LmxM.31.1330 124 RKLCLSR|VA 0.080 . LmxM.31.1330 129 SRVAALR|PP 0.086 . LmxM.31.1330 142 VPGAAVR|DG 0.096 . LmxM.31.1330 151 QSFLVDK|CK 0.074 . LmxM.31.1330 153 FLVDKCK|PT 0.071 . LmxM.31.1330 174 LSHGYLK|RY 0.077 . LmxM.31.1330 175 SHGYLKR|YG 0.171 . LmxM.31.1330 178 YLKRYGK|EL 0.117 . LmxM.31.1330 213 GIAAAGR|TR 0.076 . LmxM.31.1330 215 AAAGRTR|FG 0.099 . LmxM.31.1330 219 RTRFGTK|YH 0.077 . LmxM.31.1330 229 HYLGVTK|KP 0.056 . LmxM.31.1330 230 YLGVTKK|PV 0.207 . LmxM.31.1330 237 PVSEFFR|WI 0.140 . LmxM.31.1330 242 FRWIGVR|AV 0.157 . LmxM.31.1330 256 HDYHPVR|HN 0.107 . LmxM.31.1330 268 FSYEAAR|FL 0.135 . LmxM.31.1330 290 TVDNLVK|TE 0.056 . LmxM.31.1330 314 MQSSVAR|QM 0.111 . LmxM.31.1330 317 SVARQMR|SR 0.454 . LmxM.31.1330 319 ARQMRSR|TL 0.120 . LmxM.31.1330 323 RSRTLER|QC 0.100 . LmxM.31.1330 351 TAAVLFR|PN 0.148 . LmxM.31.1330 359 NDPYLAK|RL 0.057 . LmxM.31.1330 360 DPYLAKR|LV 0.186 . LmxM.31.1330 370 DLSPYVK|GL 0.076 . LmxM.31.1330 374 YVKGLIK|RN 0.057 . LmxM.31.1330 375 VKGLIKR|NH 0.143 . LmxM.31.1330 379 IKRNHMK|PA 0.083 . LmxM.31.1330 403 TDSIAPK|LL 0.106 . LmxM.31.1330 418 VTESLLR|SP 0.073 . LmxM.31.1330 432 PIFNGLR|VA 0.066 . LmxM.31.1330 438 RVAVLHK|LC 0.055 . LmxM.31.1330 449 NCVFHTK|LM 0.063 . LmxM.31.1330 459 ILVLAAR|DF 0.098 . LmxM.31.1330 463 AARDFPR|LL 0.117 . LmxM.31.1330 469 RLLPDGR|VE 0.062 . LmxM.31.1330 474 GRVELLR|LA 0.099 . LmxM.31.1330 493 IVYSETR|YR 0.084 . LmxM.31.1330 495 YSETRYR|DA 0.150 . LmxM.31.1330 537 TTNLPLR|RD 0.105 . LmxM.31.1330 538 TNLPLRR|DM 0.176 . LmxM.31.1330 551 DEHYALR|LA 0.082 . LmxM.31.1330 561 LLLYNLR|NR 0.072 . LmxM.31.1330 563 LYNLRNR|SA 0.179 . LmxM.31.1330 567 RNRSAEK|LP 0.073 . LmxM.31.1330 582 ILMALYK|LA 0.069 . LmxM.31.1330 588 KLASSNK|TA 0.069 . LmxM.31.1330 600 VVSHPFK|PQ 0.078 . LmxM.31.1330 609 YDELLNR|CG 0.084 . LmxM.31.1330 616 CGSNESR|TL 0.097 . LmxM.31.1330 623 TLVCLLK|TL 0.071 . ____________________________^_________________

  • Fasta :-

    >LmxM.31.1330 ATGACGCACACGGCGGAGATCACGAGGCGCGCGTTTCATCCAGCCCTCCACGAGAAGATG CAGCACGCAGACCCCCTGCAGCCGTCGGAGAGTATGCTTCTGCCCTCCAAGACGGCCCCA ACCGCACTGCGCAAGTCAGACGGAAGCCGGCTGCATCTTTGCGTCGACAAGCGCGCCTCA CAGGAGAAAGAGGATGAGGAGAAAAACCTCGCGTTGTCTCTGCGAATCACAACAAAAGAG GTACCTTCCCGCACTGGCGTTAAGGCGCCGCAGTCATCGCGGCATCCCTCGGTTCGCTGC GTCCCTGTAGAGGCGACGACCTGTGCAAATCGACTCCTGACCAACGCCCCCCGGAAGCTC TGCTTGAGTCGAGTAGCGGCGCTGCGTCCACCAAACGACGCGTCGGTTCCCGGCGCCGCC GTGCGCGATGGCCAGAGCTTCTTGGTTGACAAATGCAAACCTACCGCCATAGACATGGTG GTGGAGCTGCACGTCTACGACCTCTCACATGGATATCTGAAGCGGTATGGGAAAGAGTTA GTTGGCCTAGAAATTCCTGGCGTCTACCACTCCGGCATTGTATGTTACGGGGTTGAGGTG TACTTTGAGGGTGGTATCGGCATCGCCGCGGCGGGCCGCACACGTTTCGGTACCAAGTAC CACACGCACTACCTCGGCGTGACAAAGAAGCCCGTCTCAGAGTTCTTCCGGTGGATCGGT GTGCGGGCCGTTCACGTTAATCAGATCCACGACTACCACCCAGTGCGGCACAACTGCCAT CACTTCTCCTACGAGGCAGCGCGGTTTTTGCTTGGCGAGAACGCGTCCATTCCAAACTAT CTCTTCAGCACCGTAGACAACCTTGTGAAGACGGAGGCTGGTGCTTCCGTTGCGGAGGTC ATGACTCTCACCACCCACGGCATGCAGAGTAGCGTCGCGCGGCAGATGCGCTCCCGCACG CTGGAGCGGCAGTGCAGCATTGATATGCAACTCAGCGCCTCGACAGCCTGCGGTGTCATG ACACTGCCACCGACGGCAGCAGTGCTCTTTCGTCCGAACGACCCCTACCTTGCAAAACGA CTTGTCCTTGACCTCAGCCCGTACGTGAAGGGGCTAATCAAGAGAAACCACATGAAGCCA GCTGCATTGGCGGTGCTGGAGGAGATGGCTTGTGCGCTGATGGAGGGCACCGATTCCATT GCGCCAAAGCTGCTGTTTAACTATGTGGAGATGGTCACGGAGTCGCTCCTGCGCAGCCCG CTGGTGACGTGGGGGCCTATCTTCAACGGGCTCCGGGTGGCAGTGCTGCATAAGTTGTGC CTCATCAACTGTGTGTTTCACACGAAACTGATGTCGATTCTGGTGCTCGCGGCGCGCGAC TTTCCCCGCTTGTTGCCCGACGGGCGCGTGGAGTTGCTTCGGCTGGCGTGTAACTTTGCC TGTAGCGCCCACGGTGCTATCGTCTACAGCGAAACTCGATACCGCGATGCGTGGGTGTCG ATCGTTGGCCTAGGCCTCATGGACAGCAGCAGTACGGTTGTGTACACAGCCGCCTGCCTG GCCTTGAACGTAGCGCTAGCCATTGTCACCACTACAAATCTGCCCCTGAGACGTGACATG ACGCAGCTGACCGACGAACACTACGCGCTGCGGCTCGCGACGCTTCTGCTGTACAACCTA CGCAACCGCAGCGCAGAGAAACTGCCGGAGCCGTCCTTCAACATGATCTTGATGGCACTC TACAAACTAGCCTCGAGCAACAAAACGGCGCTGGAGTACGTTGTGTCACACCCCTTCAAG CCACAGTACGACGAGCTCCTTAACCGGTGTGGCTCGAACGAAAGTCGGACCCTTGTGTGC CTTCTCAAGACCCTCGAAGACCTTTTTGGCTAA
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  • Fasta :-

    MTHTAEITRRAFHPALHEKMQHADPLQPSESMLLPSKTAPTALRKSDGSRLHLCVDKRAS QEKEDEEKNLALSLRITTKEVPSRTGVKAPQSSRHPSVRCVPVEATTCANRLLTNAPRKL CLSRVAALRPPNDASVPGAAVRDGQSFLVDKCKPTAIDMVVELHVYDLSHGYLKRYGKEL VGLEIPGVYHSGIVCYGVEVYFEGGIGIAAAGRTRFGTKYHTHYLGVTKKPVSEFFRWIG VRAVHVNQIHDYHPVRHNCHHFSYEAARFLLGENASIPNYLFSTVDNLVKTEAGASVAEV MTLTTHGMQSSVARQMRSRTLERQCSIDMQLSASTACGVMTLPPTAAVLFRPNDPYLAKR LVLDLSPYVKGLIKRNHMKPAALAVLEEMACALMEGTDSIAPKLLFNYVEMVTESLLRSP LVTWGPIFNGLRVAVLHKLCLINCVFHTKLMSILVLAARDFPRLLPDGRVELLRLACNFA CSAHGAIVYSETRYRDAWVSIVGLGLMDSSSTVVYTAACLALNVALAIVTTTNLPLRRDM TQLTDEHYALRLATLLLYNLRNRSAEKLPEPSFNMILMALYKLASSNKTALEYVVSHPFK PQYDELLNRCGSNESRTLVCLLKTLEDLFG

    No Results
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IDSitePeptideScoreMethod
LmxM.31.133060 SDKRASQEKE0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India