LmxM.31.1500 | Metalloprotease M41 FtsH, putative

_IDPredictionOTHERSPmTPCS_Position
LmxM.31.1500OTHER0.9999300.0000600.000010
No Results

  • Fasta :-

    >LmxM.31.1500 MNQNDASPGGSLFQQMYSVQQQQQQMPPQQAYGGQLSLQPPPIPQQQKSGQGGGYAQNPY TVPGEGIGAPPSTYAGYNYQPQPMIPQQYSYTAQPLHQQPARMPPVYQPTVQDDDYYKGF HDGVVRPSGPVWGSAVSWIVPLVVNVAFFVGPIWYFRRKYMHAMASATGSTAASGGKGGA GASSNMMSGLMDMMNPMKPKNFRTEVKGTTFKDVIGIPEAKEELKQYVDFLKEPTKFTRL GARLPKGCLLTGQPGTGKTLLARAVAGEASTPFFSCSGADFIEIFGGSGPKRVRELFEEA KKAAPCVVFIDEIDAIGSRNQGGRSMGGGGSSEENRTINQLLAELDGLTSKEAIVVIAAT NYPEAIDKALLREGRFDRKVTIPMPDHKARCELFEFYLNRIITGDPNCKPKVQVFKTRNE AEAGGSGAAQASSSAALTSSEKVATETKALVTEDAKPESIKVIPGVSNKEYAIVLSDRTP GVSPAQISTIVNEGALNAAMNGKDVVPLEVLQDSIDDVLIGKKHRQRMSNASLHRTAYHE VGHCIMAWTNPLQKDVIKLSIIPRGRAGGYTQQVQDEAMEPQTDEFLFSQLCVLMGGRAA ERIFEKDISIGAMDDLQRATRLAMEKLLKYGMSKTIGQLAFKPNDKNDGRAWMTWSENLH AKVEAEARALVESAYVHTEKTLLAHKDKHQKLAELLLGKKELDKADITSILGARPVLKA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/533 Sequence name : 533 Sequence length : 719 VALUES OF COMPUTED PARAMETERS Coef20 : 3.191 CoefTot : -12.527 ChDiff : 5 ZoneTo : 112 KR : 2 DE : 2 CleavSite : 104 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.800 2.088 0.237 0.822 MesoH : 0.455 0.435 -0.190 0.313 MuHd_075 : 22.766 21.301 7.583 5.674 MuHd_095 : 28.994 21.060 8.114 7.562 MuHd_100 : 27.123 18.516 7.619 6.727 MuHd_105 : 24.014 21.390 7.611 6.051 Hmax_075 : 10.400 10.100 -0.381 4.110 Hmax_095 : 5.600 4.462 -0.858 3.360 Hmax_100 : 7.900 4.100 0.490 3.570 Hmax_105 : 10.617 10.600 0.148 4.290 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9900 0.0100 DFMC : 0.9974 0.0026
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 719 LmxM.31.1500 MNQNDASPGGSLFQQMYSVQQQQQQMPPQQAYGGQLSLQPPPIPQQQKSGQGGGYAQNPYTVPGEGIGAPPSTYAGYNYQ 80 PQPMIPQQYSYTAQPLHQQPARMPPVYQPTVQDDDYYKGFHDGVVRPSGPVWGSAVSWIVPLVVNVAFFVGPIWYFRRKY 160 MHAMASATGSTAASGGKGGAGASSNMMSGLMDMMNPMKPKNFRTEVKGTTFKDVIGIPEAKEELKQYVDFLKEPTKFTRL 240 GARLPKGCLLTGQPGTGKTLLARAVAGEASTPFFSCSGADFIEIFGGSGPKRVRELFEEAKKAAPCVVFIDEIDAIGSRN 320 QGGRSMGGGGSSEENRTINQLLAELDGLTSKEAIVVIAATNYPEAIDKALLREGRFDRKVTIPMPDHKARCELFEFYLNR 400 IITGDPNCKPKVQVFKTRNEAEAGGSGAAQASSSAALTSSEKVATETKALVTEDAKPESIKVIPGVSNKEYAIVLSDRTP 480 GVSPAQISTIVNEGALNAAMNGKDVVPLEVLQDSIDDVLIGKKHRQRMSNASLHRTAYHEVGHCIMAWTNPLQKDVIKLS 560 IIPRGRAGGYTQQVQDEAMEPQTDEFLFSQLCVLMGGRAAERIFEKDISIGAMDDLQRATRLAMEKLLKYGMSKTIGQLA 640 FKPNDKNDGRAWMTWSENLHAKVEAEARALVESAYVHTEKTLLAHKDKHQKLAELLLGKKELDKADITSILGARPVLKA 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >LmxM.31.1500 ATGAACCAGAACGACGCCTCGCCTGGCGGATCGCTGTTCCAGCAAATGTACAGCGTGCAG CAGCAACAGCAGCAGATGCCGCCGCAGCAGGCATACGGAGGCCAGCTTTCACTGCAACCA CCCCCTATTCCTCAGCAGCAGAAGAGCGGCCAAGGCGGCGGCTATGCACAAAATCCGTAC ACAGTGCCCGGAGAAGGCATAGGTGCACCGCCGTCAACCTATGCCGGCTACAACTACCAG CCCCAGCCAATGATACCGCAGCAGTATAGCTACACGGCGCAGCCGCTGCATCAGCAGCCC GCGCGCATGCCGCCGGTGTATCAGCCGACGGTCCAGGATGACGACTACTACAAGGGTTTC CACGATGGCGTTGTTCGTCCCTCTGGGCCGGTTTGGGGCAGCGCCGTCAGCTGGATTGTA CCCCTTGTCGTGAACGTGGCGTTCTTTGTTGGCCCTATCTGGTACTTCCGGCGCAAGTAC ATGCACGCCATGGCGAGTGCGACCGGCTCCACTGCCGCGTCAGGAGGCAAGGGTGGTGCG GGGGCATCGTCGAACATGATGAGTGGGCTCATGGACATGATGAACCCGATGAAGCCGAAG AACTTTCGCACCGAGGTGAAGGGGACGACGTTCAAGGATGTCATCGGCATCCCTGAAGCG AAGGAGGAGCTGAAGCAGTACGTGGACTTCTTGAAGGAGCCCACCAAGTTCACTCGCCTT GGCGCGCGGCTGCCGAAAGGGTGCCTGCTCACCGGGCAGCCTGGCACCGGCAAGACGCTG CTGGCCCGCGCTGTGGCCGGTGAGGCAAGCACGCCGTTCTTTAGCTGCTCGGGTGCCGAT TTTATTGAGATCTTTGGCGGCAGCGGCCCAAAACGTGTGCGTGAGCTCTTCGAGGAGGCC AAGAAGGCGGCTCCATGCGTTGTGTTCATTGACGAGATTGACGCGATCGGCTCGCGCAAC CAAGGTGGCCGCTCCATGGGCGGCGGCGGCAGCAGCGAGGAAAACCGCACCATCAACCAG CTTCTCGCCGAGCTTGATGGCTTGACGAGCAAGGAGGCGATTGTGGTGATTGCCGCCACG AACTATCCGGAGGCAATCGACAAGGCGCTTCTGCGCGAGGGTCGGTTTGACCGCAAGGTG ACCATTCCCATGCCGGATCACAAGGCGCGCTGTGAGCTATTCGAGTTCTACCTCAACCGC ATCATCACTGGTGACCCGAACTGCAAGCCCAAGGTTCAGGTGTTCAAGACGCGCAATGAG GCCGAGGCGGGTGGCAGCGGTGCCGCGCAGGCGTCTTCGTCGGCTGCCCTGACCAGCAGT GAGAAGGTCGCTACAGAGACGAAGGCGCTGGTCACAGAGGACGCCAAACCCGAGTCGATC AAGGTGATTCCCGGCGTTAGCAACAAGGAGTACGCTATCGTGCTCTCGGACCGCACCCCT GGCGTGTCGCCGGCGCAGATTTCTACGATCGTGAACGAAGGCGCCCTCAACGCGGCCATG AATGGCAAGGATGTAGTGCCACTGGAGGTGCTTCAGGACAGCATCGACGACGTGCTCATC GGCAAGAAACACCGTCAGCGCATGAGCAACGCGTCGCTGCACCGCACCGCGTACCACGAG GTAGGCCACTGCATTATGGCCTGGACAAACCCGCTGCAGAAGGACGTAATCAAGCTGTCC ATCATTCCCCGTGGTCGGGCCGGCGGGTACACGCAGCAGGTGCAGGACGAGGCGATGGAG CCGCAGACGGACGAGTTTCTCTTTTCGCAGTTGTGCGTGCTTATGGGCGGCCGCGCCGCG GAGCGAATCTTCGAGAAGGACATCTCCATTGGCGCCATGGACGACCTACAGCGTGCCACG CGCTTGGCGATGGAGAAGCTTCTCAAGTACGGCATGTCCAAAACAATTGGCCAGCTCGCC TTCAAGCCAAACGACAAGAATGACGGCCGTGCGTGGATGACGTGGTCGGAGAATCTGCAC GCCAAGGTGGAGGCCGAGGCCCGCGCGCTTGTCGAGTCGGCCTATGTGCACACAGAGAAG ACCCTGCTAGCTCACAAGGACAAGCACCAGAAGCTGGCAGAGTTGCTTCTCGGGAAAAAA GAACTGGACAAGGCAGACATTACTAGCATCCTCGGCGCTCGTCCGGTGCTGAAGGCCTAA
  • Download Fasta

  • Fasta :-

    MNQNDASPGGSLFQQMYSVQQQQQQMPPQQAYGGQLSLQPPPIPQQQKSGQGGGYAQNPY TVPGEGIGAPPSTYAGYNYQPQPMIPQQYSYTAQPLHQQPARMPPVYQPTVQDDDYYKGF HDGVVRPSGPVWGSAVSWIVPLVVNVAFFVGPIWYFRRKYMHAMASATGSTAASGGKGGA GASSNMMSGLMDMMNPMKPKNFRTEVKGTTFKDVIGIPEAKEELKQYVDFLKEPTKFTRL GARLPKGCLLTGQPGTGKTLLARAVAGEASTPFFSCSGADFIEIFGGSGPKRVRELFEEA KKAAPCVVFIDEIDAIGSRNQGGRSMGGGGSSEENRTINQLLAELDGLTSKEAIVVIAAT NYPEAIDKALLREGRFDRKVTIPMPDHKARCELFEFYLNRIITGDPNCKPKVQVFKTRNE AEAGGSGAAQASSSAALTSSEKVATETKALVTEDAKPESIKVIPGVSNKEYAIVLSDRTP GVSPAQISTIVNEGALNAAMNGKDVVPLEVLQDSIDDVLIGKKHRQRMSNASLHRTAYHE VGHCIMAWTNPLQKDVIKLSIIPRGRAGGYTQQVQDEAMEPQTDEFLFSQLCVLMGGRAA ERIFEKDISIGAMDDLQRATRLAMEKLLKYGMSKTIGQLAFKPNDKNDGRAWMTWSENLH AKVEAEARALVESAYVHTEKTLLAHKDKHQKLAELLLGKKELDKADITSILGARPVLKA

  • title: ATP binding site
  • coordinates: Q253,P254,G255,T256,G257,K258,T259,L260,D311,N361
No Results
No Results
IDSitePeptideScoreMethod
LmxM.31.1500331 SGGGGSSEEN0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India