LmxM.32.2540 | metallo-peptidase, Clan MA(E) Family M32

_IDPredictionOTHERSPmTPCS_Position
LmxM.32.2540OTHER0.9998360.0000630.000101
No Results

  • Fasta :-

    >LmxM.32.2540 MESYKKLETIFTKVYRLDHFLGLGNWDMNTNMPPKGEESRGEAMAMLSELRFGFITAPEV KDLIESATKGSDKLNAVQRANLREMKRAWKSATALPAEFVGRKMRLTTQAHSVWRDSRKA NDFVKFLPVLRDLVALAREEGAYLAAGTSLSPYEALMNEYEPGITTQKLDEVYANVKSWL PQLLKDIVQKQSGDAVIAFSQKFPQDKQEALCKEFMKIWHFDTDAGRLDVSPHPFTGMTK EDCRLTTNYIDDTFVQSLYGVIHESGHGKYEQNCGPREHITQPVCNARSLGLHESQSLFA EFQIGHATPFIDYLTTRLPEFFEAQPAFSQDNMRKSLQQVKPGYIRIDADEVCYPLHVIL RYEIERDLMEGKLEVEDVPRAWNAKMQEYLGLSTEGRDDVGCLQDVHWSMGALGYFPTYS LGAMYAAQIMASIRKELGDDKVDECLRTGELGPLLEKQKEKIWDHGCVYETDDLMTRATG ETLNPEYLHRHLEARYLKA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/617 Sequence name : 617 Sequence length : 499 VALUES OF COMPUTED PARAMETERS Coef20 : 3.747 CoefTot : 0.000 ChDiff : -15 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.471 0.971 0.091 0.509 MesoH : -0.982 0.046 -0.501 0.144 MuHd_075 : 10.219 6.654 2.553 1.669 MuHd_095 : 24.531 16.281 7.919 6.563 MuHd_100 : 32.302 22.748 9.701 8.568 MuHd_105 : 37.026 27.380 10.601 9.581 Hmax_075 : 0.933 5.483 -1.910 2.158 Hmax_095 : 2.900 9.700 -0.066 3.980 Hmax_100 : 6.400 14.800 0.943 4.820 Hmax_105 : 14.900 17.000 2.860 5.980 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7870 0.2130 DFMC : 0.7945 0.2055
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 499 LmxM.32.2540 MESYKKLETIFTKVYRLDHFLGLGNWDMNTNMPPKGEESRGEAMAMLSELRFGFITAPEVKDLIESATKGSDKLNAVQRA 80 NLREMKRAWKSATALPAEFVGRKMRLTTQAHSVWRDSRKANDFVKFLPVLRDLVALAREEGAYLAAGTSLSPYEALMNEY 160 EPGITTQKLDEVYANVKSWLPQLLKDIVQKQSGDAVIAFSQKFPQDKQEALCKEFMKIWHFDTDAGRLDVSPHPFTGMTK 240 EDCRLTTNYIDDTFVQSLYGVIHESGHGKYEQNCGPREHITQPVCNARSLGLHESQSLFAEFQIGHATPFIDYLTTRLPE 320 FFEAQPAFSQDNMRKSLQQVKPGYIRIDADEVCYPLHVILRYEIERDLMEGKLEVEDVPRAWNAKMQEYLGLSTEGRDDV 400 GCLQDVHWSMGALGYFPTYSLGAMYAAQIMASIRKELGDDKVDECLRTGELGPLLEKQKEKIWDHGCVYETDDLMTRATG 480 ETLNPEYLHRHLEARYLKA 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.32.2540 5 --MESYK|KL 0.082 . LmxM.32.2540 6 -MESYKK|LE 0.069 . LmxM.32.2540 13 LETIFTK|VY 0.056 . LmxM.32.2540 16 IFTKVYR|LD 0.083 . LmxM.32.2540 35 NTNMPPK|GE 0.073 . LmxM.32.2540 40 PKGEESR|GE 0.091 . LmxM.32.2540 51 AMLSELR|FG 0.074 . LmxM.32.2540 61 ITAPEVK|DL 0.072 . LmxM.32.2540 69 LIESATK|GS 0.062 . LmxM.32.2540 73 ATKGSDK|LN 0.064 . LmxM.32.2540 79 KLNAVQR|AN 0.104 . LmxM.32.2540 83 VQRANLR|EM 0.075 . LmxM.32.2540 86 ANLREMK|RA 0.143 . LmxM.32.2540 87 NLREMKR|AW 0.189 . LmxM.32.2540 90 EMKRAWK|SA 0.254 . LmxM.32.2540 102 PAEFVGR|KM 0.083 . LmxM.32.2540 103 AEFVGRK|MR 0.070 . LmxM.32.2540 105 FVGRKMR|LT 0.353 . LmxM.32.2540 115 QAHSVWR|DS 0.168 . LmxM.32.2540 118 SVWRDSR|KA 0.264 . LmxM.32.2540 119 VWRDSRK|AN 0.102 . LmxM.32.2540 125 KANDFVK|FL 0.075 . LmxM.32.2540 131 KFLPVLR|DL 0.081 . LmxM.32.2540 138 DLVALAR|EE 0.098 . LmxM.32.2540 168 PGITTQK|LD 0.057 . LmxM.32.2540 177 EVYANVK|SW 0.070 . LmxM.32.2540 185 WLPQLLK|DI 0.069 . LmxM.32.2540 190 LKDIVQK|QS 0.088 . LmxM.32.2540 202 VIAFSQK|FP 0.072 . LmxM.32.2540 207 QKFPQDK|QE 0.062 . LmxM.32.2540 213 KQEALCK|EF 0.067 . LmxM.32.2540 217 LCKEFMK|IW 0.068 . LmxM.32.2540 227 FDTDAGR|LD 0.062 . LmxM.32.2540 240 PFTGMTK|ED 0.056 . LmxM.32.2540 244 MTKEDCR|LT 0.089 . LmxM.32.2540 269 HESGHGK|YE 0.084 . LmxM.32.2540 277 EQNCGPR|EH 0.092 . LmxM.32.2540 288 QPVCNAR|SL 0.235 . LmxM.32.2540 317 IDYLTTR|LP 0.098 . LmxM.32.2540 334 FSQDNMR|KS 0.093 . LmxM.32.2540 335 SQDNMRK|SL 0.158 . LmxM.32.2540 341 KSLQQVK|PG 0.059 . LmxM.32.2540 346 VKPGYIR|ID 0.074 . LmxM.32.2540 361 PLHVILR|YE 0.088 . LmxM.32.2540 366 LRYEIER|DL 0.122 . LmxM.32.2540 372 RDLMEGK|LE 0.055 . LmxM.32.2540 380 EVEDVPR|AW 0.097 . LmxM.32.2540 385 PRAWNAK|MQ 0.084 . LmxM.32.2540 397 GLSTEGR|DD 0.143 . LmxM.32.2540 434 QIMASIR|KE 0.070 . LmxM.32.2540 435 IMASIRK|EL 0.101 . LmxM.32.2540 441 KELGDDK|VD 0.056 . LmxM.32.2540 447 KVDECLR|TG 0.067 . LmxM.32.2540 457 LGPLLEK|QK 0.061 . LmxM.32.2540 459 PLLEKQK|EK 0.059 . LmxM.32.2540 461 LEKQKEK|IW 0.081 . LmxM.32.2540 477 TDDLMTR|AT 0.101 . LmxM.32.2540 490 NPEYLHR|HL 0.093 . LmxM.32.2540 495 HRHLEAR|YL 0.192 . LmxM.32.2540 498 LEARYLK|A- 0.134 . ____________________________^_________________

  • Fasta :-

    >LmxM.32.2540 ATGGAGTCGTACAAGAAGCTGGAAACGATCTTTACGAAGGTCTACCGCCTGGACCACTTC CTCGGTCTCGGCAATTGGGACATGAACACAAACATGCCCCCCAAAGGCGAGGAATCTCGC GGGGAGGCGATGGCGATGCTCTCGGAGCTGCGCTTTGGCTTCATCACGGCACCGGAGGTG AAGGACCTGATTGAGAGCGCCACCAAGGGCAGCGACAAGCTGAATGCGGTTCAGCGCGCA AACTTGCGTGAGATGAAGCGTGCATGGAAGAGCGCTACCGCCTTGCCGGCAGAGTTTGTG GGCCGCAAGATGCGCCTCACGACACAAGCGCACAGCGTGTGGCGCGACAGCCGCAAAGCC AATGACTTCGTCAAGTTCCTACCGGTGCTTAGGGACCTGGTGGCGCTCGCCCGTGAGGAG GGCGCCTACCTTGCTGCTGGCACCTCCCTATCCCCGTACGAGGCGCTCATGAACGAGTAC GAGCCAGGCATCACGACACAGAAGCTGGATGAGGTGTATGCAAATGTAAAGTCCTGGCTG CCGCAGCTGCTCAAGGACATTGTGCAGAAGCAGTCCGGCGACGCGGTGATAGCGTTCTCG CAGAAGTTCCCGCAGGACAAGCAGGAAGCACTGTGCAAGGAGTTCATGAAAATCTGGCAC TTCGACACCGACGCCGGTCGCCTCGACGTCAGCCCCCACCCTTTCACGGGAATGACGAAG GAGGACTGCCGACTAACAACAAACTACATCGACGACACGTTTGTGCAGAGCTTGTACGGC GTCATCCACGAGAGTGGTCATGGCAAGTACGAGCAGAACTGTGGCCCACGCGAGCACATC ACGCAGCCGGTGTGTAACGCCCGCTCTCTTGGCCTGCATGAGAGCCAGAGCCTCTTTGCG GAGTTTCAGATTGGCCACGCGACGCCCTTCATCGACTACCTCACAACTCGCCTTCCTGAG TTCTTCGAGGCGCAGCCAGCGTTTTCGCAGGACAATATGCGCAAGTCGCTGCAGCAGGTG AAGCCTGGCTACATCCGCATCGATGCGGATGAGGTGTGCTACCCTCTGCACGTGATCCTG CGCTACGAGATCGAGCGCGACTTGATGGAGGGCAAGTTGGAGGTGGAGGATGTGCCGCGC GCGTGGAATGCGAAGATGCAGGAGTACTTGGGTCTCTCAACGGAGGGCCGTGACGATGTC GGGTGCCTGCAGGACGTGCATTGGTCCATGGGTGCGCTCGGCTACTTCCCGACGTACTCG CTCGGTGCCATGTATGCGGCGCAGATTATGGCGAGCATCCGGAAGGAGCTGGGAGACGAC AAGGTGGACGAGTGCCTACGCACCGGTGAGCTCGGCCCCCTCCTGGAGAAGCAGAAGGAG AAGATCTGGGACCATGGCTGTGTGTACGAGACGGACGACCTCATGACACGTGCAACAGGC GAGACACTGAACCCCGAGTACCTGCACCGCCACCTGGAGGCGCGCTACCTAAAGGCCTGA
  • Download Fasta

  • Fasta :-

    MESYKKLETIFTKVYRLDHFLGLGNWDMNTNMPPKGEESRGEAMAMLSELRFGFITAPEV KDLIESATKGSDKLNAVQRANLREMKRAWKSATALPAEFVGRKMRLTTQAHSVWRDSRKA NDFVKFLPVLRDLVALAREEGAYLAAGTSLSPYEALMNEYEPGITTQKLDEVYANVKSWL PQLLKDIVQKQSGDAVIAFSQKFPQDKQEALCKEFMKIWHFDTDAGRLDVSPHPFTGMTK EDCRLTTNYIDDTFVQSLYGVIHESGHGKYEQNCGPREHITQPVCNARSLGLHESQSLFA EFQIGHATPFIDYLTTRLPEFFEAQPAFSQDNMRKSLQQVKPGYIRIDADEVCYPLHVIL RYEIERDLMEGKLEVEDVPRAWNAKMQEYLGLSTEGRDDVGCLQDVHWSMGALGYFPTYS LGAMYAAQIMASIRKELGDDKVDECLRTGELGPLLEKQKEKIWDHGCVYETDDLMTRATG ETLNPEYLHRHLEARYLKA

  • title: metal binding site
  • coordinates: H263,H267,E294
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.32.2540117 SVWRDSRKAN0.997unspLmxM.32.2540151 SGTSLSPYEA0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India