LmxM.32.2570 | metallo-peptidase, Clan MF, Family M17

_IDPredictionOTHERSPmTPCS_Position
LmxM.32.2570OTHER0.9996940.0001010.000205
No Results

  • Fasta :-

    >LmxM.32.2570 MSTYKRIRSNSTYEEANVSAFVASCVEYASNVTLHVAETGRALTSKTGQVQTVLVLGTDA QLKEMTAMAVCPHYDEAACAAAATAPESRAHVVKVTATLRLLIGKVPSVASRHNCASRPD QVSEIVKQAMAECPAADAEAGLDIYYVGSGYEVSVAVAIARSCKQSFTAKRGHAEQSYLN VGRPVRVVMPSGKPAQLAVIAHCVQLCQRLVDAPTNLLDTLTFTEIAERWAAKLKAAGID VSVNVIAGEELRERGYGGVYGTGKAAEYPPHLVTLSYRPKAGMSPKDRIALVGKGIVYDT GGLSIKSREGMCSMKHDMGGAAAVFCGLLCLAMMRAPIEVSSILCLADNAVGPRSQRNDD ILRMKSGVTVEINNTDAEGRLVLSDGVYHACKELSYTPSIIVDMATLTGAQGIATGQHHA AIYTNSEASEKRFVAAGKACGDLCFPVVYCPEFHSAEFVSAVADCKNSVKNRANAQVSCA GYFIGNNLSKDYEGEWVHVDLAAPATRDEATGFGVALIVQTFAAELL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/477 Sequence name : 477 Sequence length : 527 VALUES OF COMPUTED PARAMETERS Coef20 : 4.298 CoefTot : 0.045 ChDiff : -3 ZoneTo : 13 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.253 2.065 0.505 0.707 MesoH : -0.215 0.605 -0.191 0.252 MuHd_075 : 20.378 10.228 6.297 2.836 MuHd_095 : 10.136 8.927 3.902 2.895 MuHd_100 : 4.622 8.274 1.875 2.968 MuHd_105 : 4.889 5.027 1.233 2.771 Hmax_075 : 3.500 -0.200 -1.154 0.780 Hmax_095 : -6.037 -1.100 -3.780 1.050 Hmax_100 : -2.100 0.500 -3.300 1.050 Hmax_105 : -4.000 1.500 -3.107 1.700 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9705 0.0295 DFMC : 0.9181 0.0819
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 527 LmxM.32.2570 MSTYKRIRSNSTYEEANVSAFVASCVEYASNVTLHVAETGRALTSKTGQVQTVLVLGTDAQLKEMTAMAVCPHYDEAACA 80 AAATAPESRAHVVKVTATLRLLIGKVPSVASRHNCASRPDQVSEIVKQAMAECPAADAEAGLDIYYVGSGYEVSVAVAIA 160 RSCKQSFTAKRGHAEQSYLNVGRPVRVVMPSGKPAQLAVIAHCVQLCQRLVDAPTNLLDTLTFTEIAERWAAKLKAAGID 240 VSVNVIAGEELRERGYGGVYGTGKAAEYPPHLVTLSYRPKAGMSPKDRIALVGKGIVYDTGGLSIKSREGMCSMKHDMGG 320 AAAVFCGLLCLAMMRAPIEVSSILCLADNAVGPRSQRNDDILRMKSGVTVEINNTDAEGRLVLSDGVYHACKELSYTPSI 400 IVDMATLTGAQGIATGQHHAAIYTNSEASEKRFVAAGKACGDLCFPVVYCPEFHSAEFVSAVADCKNSVKNRANAQVSCA 480 GYFIGNNLSKDYEGEWVHVDLAAPATRDEATGFGVALIVQTFAAELL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.32.2570 5 --MSTYK|RI 0.060 . LmxM.32.2570 6 -MSTYKR|IR 0.199 . LmxM.32.2570 8 STYKRIR|SN 0.233 . LmxM.32.2570 41 HVAETGR|AL 0.107 . LmxM.32.2570 46 GRALTSK|TG 0.072 . LmxM.32.2570 63 GTDAQLK|EM 0.059 . LmxM.32.2570 89 ATAPESR|AH 0.085 . LmxM.32.2570 94 SRAHVVK|VT 0.082 . LmxM.32.2570 100 KVTATLR|LL 0.081 . LmxM.32.2570 105 LRLLIGK|VP 0.064 . LmxM.32.2570 112 VPSVASR|HN 0.164 . LmxM.32.2570 118 RHNCASR|PD 0.104 . LmxM.32.2570 127 QVSEIVK|QA 0.081 . LmxM.32.2570 161 VAVAIAR|SC 0.166 . LmxM.32.2570 164 AIARSCK|QS 0.198 . LmxM.32.2570 170 KQSFTAK|RG 0.080 . LmxM.32.2570 171 QSFTAKR|GH 0.148 . LmxM.32.2570 183 SYLNVGR|PV 0.155 . LmxM.32.2570 186 NVGRPVR|VV 0.412 . LmxM.32.2570 193 VVMPSGK|PA 0.069 . LmxM.32.2570 209 CVQLCQR|LV 0.098 . LmxM.32.2570 229 FTEIAER|WA 0.080 . LmxM.32.2570 233 AERWAAK|LK 0.083 . LmxM.32.2570 235 RWAAKLK|AA 0.087 . LmxM.32.2570 252 IAGEELR|ER 0.092 . LmxM.32.2570 254 GEELRER|GY 0.128 . LmxM.32.2570 264 GVYGTGK|AA 0.073 . LmxM.32.2570 278 LVTLSYR|PK 0.074 . LmxM.32.2570 280 TLSYRPK|AG 0.069 . LmxM.32.2570 286 KAGMSPK|DR 0.080 . LmxM.32.2570 288 GMSPKDR|IA 0.148 . LmxM.32.2570 294 RIALVGK|GI 0.071 . LmxM.32.2570 306 TGGLSIK|SR 0.086 . LmxM.32.2570 308 GLSIKSR|EG 0.128 . LmxM.32.2570 315 EGMCSMK|HD 0.070 . LmxM.32.2570 335 LCLAMMR|AP 0.073 . LmxM.32.2570 354 DNAVGPR|SQ 0.103 . LmxM.32.2570 357 VGPRSQR|ND 0.193 . LmxM.32.2570 363 RNDDILR|MK 0.093 . LmxM.32.2570 365 DDILRMK|SG 0.077 . LmxM.32.2570 380 NTDAEGR|LV 0.088 . LmxM.32.2570 392 GVYHACK|EL 0.065 . LmxM.32.2570 431 NSEASEK|RF 0.062 . LmxM.32.2570 432 SEASEKR|FV 0.424 . LmxM.32.2570 438 RFVAAGK|AC 0.073 . LmxM.32.2570 466 SAVADCK|NS 0.059 . LmxM.32.2570 470 DCKNSVK|NR 0.059 . LmxM.32.2570 472 KNSVKNR|AN 0.160 . LmxM.32.2570 490 IGNNLSK|DY 0.090 . LmxM.32.2570 507 LAAPATR|DE 0.120 . ____________________________^_________________

  • Fasta :-

    >LmxM.32.2570 ATGAGCACCTACAAGCGCATCCGCTCCAATTCGACGTACGAAGAGGCGAACGTGTCCGCC TTCGTGGCCAGCTGCGTGGAGTATGCGAGCAACGTGACGCTCCACGTGGCGGAGACGGGT CGCGCGCTGACTTCAAAGACGGGACAGGTGCAGACGGTGCTTGTGCTGGGCACGGATGCG CAACTGAAGGAGATGACCGCGATGGCGGTGTGCCCGCACTACGATGAGGCGGCGTGCGCT GCTGCCGCGACAGCGCCGGAGTCGCGTGCACACGTGGTGAAGGTGACGGCGACGTTACGG CTGCTGATCGGGAAGGTGCCGTCCGTTGCGTCGCGCCACAACTGTGCGTCGCGGCCCGAC CAGGTGAGCGAGATCGTGAAGCAGGCGATGGCGGAGTGCCCCGCCGCGGACGCCGAGGCT GGGCTGGACATCTACTACGTGGGCAGCGGCTACGAGGTGAGCGTGGCCGTCGCGATTGCG CGGTCGTGCAAGCAGTCGTTCACTGCGAAGCGCGGGCACGCGGAGCAGAGCTACCTGAAC GTTGGCCGCCCGGTGCGCGTGGTGATGCCGTCCGGCAAGCCGGCGCAGCTCGCTGTGATT GCGCACTGCGTGCAGCTGTGCCAGCGGCTGGTGGACGCGCCAACGAACCTGCTGGACACG TTGACGTTCACGGAGATCGCTGAGCGGTGGGCAGCAAAGCTGAAGGCAGCCGGCATCGAC GTGTCCGTGAACGTGATCGCTGGAGAGGAGCTTCGCGAGCGTGGGTACGGCGGTGTTTAC GGTACAGGGAAGGCCGCTGAGTACCCGCCGCACCTTGTGACGCTGTCGTACAGGCCGAAG GCTGGTATGTCACCCAAGGATCGGATTGCACTTGTGGGCAAAGGCATCGTGTACGACACG GGCGGCCTTTCGATCAAGTCCCGCGAGGGCATGTGCTCGATGAAGCACGACATGGGAGGT GCAGCGGCCGTGTTCTGCGGCTTGTTGTGCCTGGCGATGATGCGTGCGCCTATTGAGGTG TCAAGCATCTTGTGTCTCGCTGACAACGCCGTGGGCCCCCGCTCACAGCGGAATGATGAC ATCCTGCGCATGAAGTCCGGCGTCACTGTAGAGATCAACAACACAGACGCCGAGGGCCGC CTTGTGCTCTCGGACGGTGTCTACCATGCCTGCAAGGAGCTGAGCTACACGCCGAGCATC ATTGTAGACATGGCGACGCTGACAGGCGCGCAAGGCATTGCGACCGGTCAGCACCACGCT GCCATCTACACGAACTCAGAGGCCAGCGAGAAGCGCTTCGTGGCCGCCGGCAAGGCGTGC GGCGACTTGTGTTTTCCAGTGGTGTACTGCCCTGAGTTTCACAGCGCCGAGTTTGTCAGC GCTGTGGCCGATTGCAAGAATAGTGTGAAGAACCGCGCCAATGCACAGGTGAGCTGTGCC GGGTACTTTATTGGCAACAACCTGTCCAAGGACTACGAGGGCGAATGGGTGCATGTTGAC CTGGCCGCGCCCGCGACCCGCGATGAGGCTACGGGGTTTGGTGTCGCCTTGATTGTGCAG ACGTTTGCAGCGGAGCTGTTGTAG
  • Download Fasta

  • Fasta :-

    MSTYKRIRSNSTYEEANVSAFVASCVEYASNVTLHVAETGRALTSKTGQVQTVLVLGTDA QLKEMTAMAVCPHYDEAACAAAATAPESRAHVVKVTATLRLLIGKVPSVASRHNCASRPD QVSEIVKQAMAECPAADAEAGLDIYYVGSGYEVSVAVAIARSCKQSFTAKRGHAEQSYLN VGRPVRVVMPSGKPAQLAVIAHCVQLCQRLVDAPTNLLDTLTFTEIAERWAAKLKAAGID VSVNVIAGEELRERGYGGVYGTGKAAEYPPHLVTLSYRPKAGMSPKDRIALVGKGIVYDT GGLSIKSREGMCSMKHDMGGAAAVFCGLLCLAMMRAPIEVSSILCLADNAVGPRSQRNDD ILRMKSGVTVEINNTDAEGRLVLSDGVYHACKELSYTPSIIVDMATLTGAQGIATGQHHA AIYTNSEASEKRFVAAGKACGDLCFPVVYCPEFHSAEFVSAVADCKNSVKNRANAQVSCA GYFIGNNLSKDYEGEWVHVDLAAPATRDEATGFGVALIVQTFAAELL

  • title: Substrate-binding/catalytic site
  • coordinates: K294,D299,K306,D317,D376,E378,R380,L407
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.32.2570355 SVGPRSQRND0.994unspLmxM.32.2570355 SVGPRSQRND0.994unspLmxM.32.2570355 SVGPRSQRND0.994unspLmxM.32.2570429 SNSEASEKRF0.997unspLmxM.32.257011 SIRSNSTYEE0.997unspLmxM.32.2570284 SKAGMSPKDR0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India