LmxM.33.2810 | Carboxypeptidase-like protein

UniProt_ID: E9B572

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0004181 GO:0008270
Computed_GO_Functions: metallocarboxypeptidase activity zinc ion binding
Computed_GO_Process_IDs: GO:0006508
Computed_GO_Processes: proteolysis
Curated_GO_Component_IDs: GO:0005737 GO:0005829
Curated_GO_Components: cytoplasm cytosol
Curated_GO_Function_IDs: GO:0043531 GO:0005524 GO:0004181 GO:0008270
Curated_GO_Functions: ADP binding ATP binding metallocarboxypeptidase activity zinc ion binding
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	LmxM.33.2810	OTHER	0.999593	0.000032	0.000375

No Results

Fasta :-
>LmxM.33.2810 MGLGFSGCSQQSSPREAASQRNSIARHRKKSRSTYSSTKLQPMNGLDRDASLHVANDAAS GAVGSQQSAASLTVQGPEADDAHWVFQRPPNNQRTFYFQEDNLEFSSQFDSGNLIQVERV GTFHYRMYTAMDCGNAPWQTNNRQWFHFSVRGGSKGVVVTICFVGMAHSNMFTYDWMPVM AIVPTRPQYTRIAGKAHVEALEKMPETPGYPLLVHKPVSKDDADSDGGGDEGDNDADASA AGANNNAGTGGIAFSISPTGKSSGTSKKKKAKKKSIAMNLTFNFKIETEIAVTYTPPQGR PDSAAIYIASNHPYTYYTLQRNLGMWQEAARRSNALREMNVPVSDHQARRSSSEQRSGTD SYALDGLPKVQPGSSGKSKKWVAGSNTGNAAAPYCAEFSEIYFHREVLCKSLEGRDVTLL TISDCSSMTLERAPLLSKEDGLPHSSALGFTQRPYSFSGKQYVVLTARVHPGECPGSHLM HGCIDFLMNCTDCRAAALRHNFVFCVVPMLNPDGVVRGHSRVDSNGVDLNRMYRDPSRKQ HPAPYAVLALLRSLGSRVALFIDMHAHANKRGTFFYGNSMDWGNQIENLLYAKLVSLNTP YLDFRSCNFSEANMFAVSKSGKRKDSSSRVVAFTEVGIVHGYTIETSHVMADTMNPVALL SNHQADQLDTALLSPPPVMHSPATFHDTARAMLLGLLDLKGMNPISRLPLTQFHSTRGLA LWLQRQLQIESAETLFAQAFKMYGKEAQASTGEFGNALLATIMRSMAAEEYPEKITIREA RLLPRITFSGVRSFVPLETAIVLLSQTAPTGPPRSLLYGSGNCGAGSGTAAAGGTGCKGG GSAQRRGTSPSSGNSCPTTVPPVVIATRRRSKPILLTSDTTVET
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/612 Sequence name : 612 Sequence length : 884 VALUES OF COMPUTED PARAMETERS Coef20 : 3.642 CoefTot : -0.778 ChDiff : 16 ZoneTo : 46 KR : 8 DE : 1 CleavSite : 30 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.618 1.712 0.207 0.585 MesoH : 0.130 0.312 -0.110 0.247 MuHd_075 : 43.217 21.365 11.960 7.515 MuHd_095 : 23.665 14.395 6.072 5.394 MuHd_100 : 26.911 13.012 6.156 5.193 MuHd_105 : 35.236 14.488 8.699 6.684 Hmax_075 : 4.433 7.117 2.639 1.867 Hmax_095 : 3.000 -2.300 -3.628 -0.330 Hmax_100 : 3.000 -0.700 -4.177 0.030 Hmax_105 : 4.317 -1.167 -1.892 0.630 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7600 0.2400 DFMC : 0.3334 0.6666 This protein is probably imported in mitochondria. f(Ser) = 0.2174 f(Arg) = 0.1087 CMi = 0.97847 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 884 LmxM.33.2810 MGLGFSGCSQQSSPREAASQRNSIARHRKKSRSTYSSTKLQPMNGLDRDASLHVANDAASGAVGSQQSAASLTVQGPEAD 80 DAHWVFQRPPNNQRTFYFQEDNLEFSSQFDSGNLIQVERVGTFHYRMYTAMDCGNAPWQTNNRQWFHFSVRGGSKGVVVT 160 ICFVGMAHSNMFTYDWMPVMAIVPTRPQYTRIAGKAHVEALEKMPETPGYPLLVHKPVSKDDADSDGGGDEGDNDADASA 240 AGANNNAGTGGIAFSISPTGKSSGTSKKKKAKKKSIAMNLTFNFKIETEIAVTYTPPQGRPDSAAIYIASNHPYTYYTLQ 320 RNLGMWQEAARRSNALREMNVPVSDHQARRSSSEQRSGTDSYALDGLPKVQPGSSGKSKKWVAGSNTGNAAAPYCAEFSE 400 IYFHREVLCKSLEGRDVTLLTISDCSSMTLERAPLLSKEDGLPHSSALGFTQRPYSFSGKQYVVLTARVHPGECPGSHLM 480 HGCIDFLMNCTDCRAAALRHNFVFCVVPMLNPDGVVRGHSRVDSNGVDLNRMYRDPSRKQHPAPYAVLALLRSLGSRVAL 560 FIDMHAHANKRGTFFYGNSMDWGNQIENLLYAKLVSLNTPYLDFRSCNFSEANMFAVSKSGKRKDSSSRVVAFTEVGIVH 640 GYTIETSHVMADTMNPVALLSNHQADQLDTALLSPPPVMHSPATFHDTARAMLLGLLDLKGMNPISRLPLTQFHSTRGLA 720 LWLQRQLQIESAETLFAQAFKMYGKEAQASTGEFGNALLATIMRSMAAEEYPEKITIREARLLPRITFSGVRSFVPLETA 800 IVLLSQTAPTGPPRSLLYGSGNCGAGSGTAAAGGTGCKGGGSAQRRGTSPSSGNSCPTTVPPVVIATRRRSKPILLTSDT 880 TVET 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 .... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.33.2810 15 SQQSSPR|EA 0.136 . LmxM.33.2810 21 REAASQR|NS 0.089 . LmxM.33.2810 26 QRNSIAR|HR 0.163 . LmxM.33.2810 28 NSIARHR|KK 0.097 . LmxM.33.2810 29 SIARHRK|KS 0.272 . LmxM.33.2810 30 IARHRKK|SR 0.207 . LmxM.33.2810 32 RHRKKSR|ST 0.214 . LmxM.33.2810 39 STYSSTK|LQ 0.058 . LmxM.33.2810 48 PMNGLDR|DA 0.119 . LmxM.33.2810 88 AHWVFQR|PP 0.090 . LmxM.33.2810 94 RPPNNQR|TF 0.095 . LmxM.33.2810 119 NLIQVER|VG 0.075 . LmxM.33.2810 126 VGTFHYR|MY 0.097 . LmxM.33.2810 143 PWQTNNR|QW 0.081 . LmxM.33.2810 151 WFHFSVR|GG 0.128 . LmxM.33.2810 155 SVRGGSK|GV 0.074 . LmxM.33.2810 186 MAIVPTR|PQ 0.103 . LmxM.33.2810 191 TRPQYTR|IA 0.172 . LmxM.33.2810 195 YTRIAGK|AH 0.069 . LmxM.33.2810 203 HVEALEK|MP 0.057 . LmxM.33.2810 216 YPLLVHK|PV 0.084 . LmxM.33.2810 220 VHKPVSK|DD 0.073 . LmxM.33.2810 261 SISPTGK|SS 0.139 . LmxM.33.2810 267 KSSGTSK|KK 0.077 . LmxM.33.2810 268 SSGTSKK|KK 0.119 . LmxM.33.2810 269 SGTSKKK|KA 0.112 . LmxM.33.2810 270 GTSKKKK|AK 0.235 . LmxM.33.2810 272 SKKKKAK|KK 0.095 . LmxM.33.2810 273 KKKKAKK|KS 0.129 . LmxM.33.2810 274 KKKAKKK|SI 0.270 . LmxM.33.2810 285 NLTFNFK|IE 0.058 . LmxM.33.2810 300 YTPPQGR|PD 0.100 . LmxM.33.2810 321 TYYTLQR|NL 0.123 . LmxM.33.2810 331 MWQEAAR|RS 0.094 . LmxM.33.2810 332 WQEAARR|SN 0.143 . LmxM.33.2810 337 RRSNALR|EM 0.106 . LmxM.33.2810 349 VSDHQAR|RS 0.124 . LmxM.33.2810 350 SDHQARR|SS 0.478 . LmxM.33.2810 356 RSSSEQR|SG 0.182 . LmxM.33.2810 369 ALDGLPK|VQ 0.054 . LmxM.33.2810 377 QPGSSGK|SK 0.092 . LmxM.33.2810 379 GSSGKSK|KW 0.098 . LmxM.33.2810 380 SSGKSKK|WV 0.303 . LmxM.33.2810 405 SEIYFHR|EV 0.115 . LmxM.33.2810 410 HREVLCK|SL 0.108 . LmxM.33.2810 415 CKSLEGR|DV 0.181 . LmxM.33.2810 432 SSMTLER|AP 0.072 . LmxM.33.2810 438 RAPLLSK|ED 0.054 . LmxM.33.2810 453 ALGFTQR|PY 0.114 . LmxM.33.2810 460 PYSFSGK|QY 0.066 . LmxM.33.2810 468 YVVLTAR|VH 0.072 . LmxM.33.2810 494 MNCTDCR|AA 0.084 . LmxM.33.2810 499 CRAAALR|HN 0.093 . LmxM.33.2810 517 NPDGVVR|GH 0.104 . LmxM.33.2810 521 VVRGHSR|VD 0.096 . LmxM.33.2810 531 NGVDLNR|MY 0.073 . LmxM.33.2810 534 DLNRMYR|DP 0.401 . LmxM.33.2810 538 MYRDPSR|KQ 0.094 . LmxM.33.2810 539 YRDPSRK|QH 0.077 . LmxM.33.2810 552 AVLALLR|SL 0.112 . LmxM.33.2810 557 LRSLGSR|VA 0.107 . LmxM.33.2810 570 MHAHANK|RG 0.060 . LmxM.33.2810 571 HAHANKR|GT 0.263 . LmxM.33.2810 593 ENLLYAK|LV 0.068 . LmxM.33.2810 605 TPYLDFR|SC 0.158 . LmxM.33.2810 619 NMFAVSK|SG 0.074 . LmxM.33.2810 622 AVSKSGK|RK 0.073 . LmxM.33.2810 623 VSKSGKR|KD 0.137 . LmxM.33.2810 624 SKSGKRK|DS 0.183 . LmxM.33.2810 629 RKDSSSR|VV 0.115 . LmxM.33.2810 690 TFHDTAR|AM 0.109 . LmxM.33.2810 700 LGLLDLK|GM 0.057 . LmxM.33.2810 707 GMNPISR|LP 0.095 . LmxM.33.2810 717 TQFHSTR|GL 0.113 . LmxM.33.2810 725 LALWLQR|QL 0.078 . LmxM.33.2810 741 LFAQAFK|MY 0.082 . LmxM.33.2810 745 AFKMYGK|EA 0.071 . LmxM.33.2810 764 LLATIMR|SM 0.142 . LmxM.33.2810 774 AEEYPEK|IT 0.061 . LmxM.33.2810 778 PEKITIR|EA 0.097 . LmxM.33.2810 781 ITIREAR|LL 0.313 . LmxM.33.2810 785 EARLLPR|IT 0.115 . LmxM.33.2810 792 ITFSGVR|SF 0.112 . LmxM.33.2810 814 APTGPPR|SL 0.122 . LmxM.33.2810 838 AGGTGCK|GG 0.069 . LmxM.33.2810 845 GGGSAQR|RG 0.066 . LmxM.33.2810 846 GGSAQRR|GT 0.309 . LmxM.33.2810 868 PVVIATR|RR 0.072 . LmxM.33.2810 869 VVIATRR|RS 0.133 . LmxM.33.2810 870 VIATRRR|SK 0.225 . LmxM.33.2810 872 ATRRRSK|PI 0.114 . ____________________________^_________________

Fasta :-
>LmxM.33.2810 ATGGGGCTGGGCTTCAGCGGCTGCTCCCAGCAGAGTTCGCCTAGGGAGGCCGCCTCGCAG CGGAACTCGATAGCGAGGCACCGCAAAAAATCTAGATCCACTTATAGCAGCACGAAGTTG CAGCCGATGAACGGGTTAGATCGAGATGCTTCTCTGCACGTCGCTAATGACGCGGCAAGC GGCGCTGTAGGATCGCAGCAAAGCGCTGCAAGCCTGACGGTGCAAGGGCCGGAGGCGGAT GACGCGCACTGGGTGTTTCAGAGACCGCCGAACAACCAGCGCACATTCTACTTTCAGGAG GACAATCTTGAGTTCTCCTCGCAGTTTGACAGTGGCAACTTGATTCAGGTGGAGCGGGTG GGCACCTTCCACTACCGCATGTACACGGCGATGGACTGCGGCAACGCACCATGGCAGACC AACAACCGCCAGTGGTTTCACTTCTCCGTCCGCGGCGGCAGCAAGGGCGTTGTCGTCACG ATCTGCTTTGTCGGCATGGCACACAGCAATATGTTCACCTATGATTGGATGCCGGTCATG GCAATTGTGCCTACGCGACCGCAGTACACTCGCATCGCTGGAAAAGCGCACGTGGAGGCC CTCGAGAAAATGCCAGAGACTCCCGGTTATCCTCTGCTTGTGCACAAGCCCGTGTCAAAG GACGACGCCGACAGTGACGGTGGCGGCGATGAAGGTGACAACGATGCCGATGCCAGCGCT GCTGGCGCCAACAACAATGCGGGCACTGGCGGAATCGCTTTCTCCATCTCGCCTACGGGC AAGTCCTCTGGGACCAGCAAGAAGAAAAAGGCAAAGAAGAAGAGCATTGCTATGAACCTC ACCTTCAACTTCAAAATTGAGACAGAGATCGCGGTAACGTACACCCCGCCTCAGGGGCGC CCAGACTCGGCCGCGATCTACATTGCAAGCAATCACCCTTATACCTACTACACACTGCAA CGCAACCTTGGGATGTGGCAGGAGGCGGCGCGACGAAGTAACGCTTTGCGGGAGATGAAT GTGCCGGTATCCGACCACCAAGCGCGGCGCTCCAGCTCCGAGCAGCGTAGCGGGACGGAC TCGTACGCCCTAGACGGCCTGCCCAAAGTTCAGCCTGGAAGCAGCGGAAAGAGTAAGAAG TGGGTTGCAGGTTCCAACACCGGAAACGCTGCTGCTCCATACTGTGCGGAGTTCAGCGAG ATCTATTTCCACCGCGAGGTTCTCTGCAAATCGCTGGAGGGGCGCGACGTTACACTGCTG ACGATTAGCGACTGCAGTTCGATGACGTTAGAGCGGGCACCCCTCCTTTCCAAGGAAGAC GGCCTTCCCCACTCTTCAGCTCTCGGCTTTACGCAGAGGCCGTACTCCTTTTCTGGCAAG CAGTACGTGGTGCTGACGGCTCGTGTGCATCCAGGCGAATGCCCAGGCAGCCATCTTATG CACGGCTGTATTGATTTTCTCATGAACTGCACAGACTGTCGAGCGGCGGCGCTGCGTCAC AACTTTGTCTTCTGCGTGGTTCCGATGCTGAACCCCGACGGCGTAGTTCGCGGCCACAGC CGCGTCGACTCAAACGGCGTCGATCTCAACCGCATGTACAGGGACCCGTCACGTAAGCAA CACCCCGCACCATACGCGGTTCTCGCACTTCTGCGGTCTCTAGGCAGCCGCGTGGCGCTT TTCATCGACATGCACGCACATGCCAATAAGCGGGGCACCTTCTTTTACGGTAACAGCATG GATTGGGGCAACCAGATAGAAAACCTGCTTTACGCAAAGCTGGTCTCGCTTAACACGCCC TACCTCGACTTCCGCAGCTGCAACTTCTCGGAGGCGAACATGTTCGCCGTTAGCAAGTCT GGCAAACGCAAGGACTCCTCCAGCCGCGTCGTGGCCTTTACCGAGGTCGGTATCGTGCAC GGCTACACCATCGAGACCTCACACGTGATGGCTGACACAATGAATCCAGTCGCGCTGCTG TCGAATCATCAAGCCGACCAACTGGATACTGCCCTTTTAAGCCCACCCCCTGTTATGCAC TCACCAGCTACCTTTCACGACACTGCTCGTGCGATGCTGCTGGGACTGCTGGACCTTAAG GGTATGAACCCCATAAGTCGTCTACCCTTGACACAGTTTCACTCCACCCGCGGACTCGCT CTTTGGCTGCAGCGGCAGCTGCAGATTGAATCAGCGGAGACGCTTTTTGCGCAGGCCTTC AAGATGTACGGCAAGGAAGCTCAGGCCTCCACAGGCGAGTTTGGGAACGCTCTGCTCGCC ACCATCATGAGAAGCATGGCGGCAGAGGAGTATCCGGAGAAGATCACAATCAGGGAGGCG CGGTTGCTGCCCCGAATCACCTTCAGCGGTGTTCGGAGCTTTGTGCCACTAGAGACAGCA ATTGTGCTGCTGTCGCAAACGGCGCCAACGGGGCCCCCGCGCTCGCTTCTGTACGGCAGC GGCAACTGTGGGGCGGGAAGCGGCACTGCCGCTGCCGGGGGAACCGGCTGCAAAGGCGGC GGCAGCGCTCAGCGCCGTGGCACGTCTCCCTCGAGTGGGAACAGCTGCCCGACTACGGTC CCGCCGGTGGTGATCGCGACGCGGCGCCGTTCGAAGCCAATTCTTCTCACCAGCGATACA ACTGTTGAAACGTAG
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Fasta :-

No Results

title: Zn binding site
coordinates: H470,E473,H565

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	LmxM.33.2810	33 S	KKSRSTYSS	0.996	unsp	LmxM.33.2810	33 S	KKSRSTYSS	0.996	unsp	LmxM.33.2810	33 S	KKSRSTYSS	0.996	unsp	LmxM.33.2810	37 S	STYSSTKLQ	0.993	unsp	LmxM.33.2810	219 S	HKPVSKDDA	0.997	unsp	LmxM.33.2810	225 S	DDADSDGGG	0.994	unsp	LmxM.33.2810	266 S	SSGTSKKKK	0.994	unsp	LmxM.33.2810	351 S	QARRSSSEQ	0.997	unsp	LmxM.33.2810	352 S	ARRSSSEQR	0.995	unsp	LmxM.33.2810	353 S	RRSSSEQRS	0.992	unsp	LmxM.33.2810	357 S	SEQRSGTDS	0.997	unsp	LmxM.33.2810	378 S	SSGKSKKWV	0.991	unsp	LmxM.33.2810	437 S	APLLSKEDG	0.997	unsp	LmxM.33.2810	520 S	VRGHSRVDS	0.995	unsp	LmxM.33.2810	537 S	YRDPSRKQH	0.997	unsp	LmxM.33.2810	620 S	AVSKSGKRK	0.995	unsp	LmxM.33.2810	626 S	KRKDSSSRV	0.995	unsp	LmxM.33.2810	13 S	SQQSSPREA	0.996	unsp	LmxM.33.2810	31 S	HRKKSRSTY	0.993	unsp

LmxM.33.2810 | Carboxypeptidase-like protein

ID's

UniProt_ID: E9B572

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0004181 GO:0008270

Computed_GO_Functions: metallocarboxypeptidase activity zinc ion binding

Computed_GO_Process_IDs: GO:0006508

Computed_GO_Processes: proteolysis

Curated_GO_Component_IDs: GO:0005737 GO:0005829

Curated_GO_Components: cytoplasm cytosol

Curated_GO_Function_IDs: GO:0043531 GO:0005524 GO:0004181 GO:0008270

Curated_GO_Functions: ADP binding ATP binding metallocarboxypeptidase activity zinc ion binding

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India