LmxM.33.4060 | ubiquitin hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
LmxM.33.4060OTHER0.9639850.0009350.035080
No Results

  • Fasta :-

    >LmxM.33.4060 MRSGYVGIYNQGSTCYLNSVIQALYHLPAFRTQIYNLPNVQKDSVALALRDVFAQLEVRN RNTTTTELTKAFGWSAQEAAVQHDVHELMQQLFDSLETTLKETPKKNMIRDMFGGLMIYR SRAIDGAEYLSDRLEDFYDVELVVQNKANIEESLREFSSGERIEGVSVEVVPGADATPHT IERSQHFLDCPKVLLVHPNRVAFDMETYELVTLRNVWSFDFNLSLASYVVDDASLKLDKE SQEKWKKLSHRTHLSANYSLRSILTHAGDATIGHYYVYVNFDGEWVRFNDEVVESATEED VRKSAFGGQSIQSRYRLFDNERASLLIYVNDDVKEELLSETPPPSAIVEVGRSIEEERAR KEETHKVSYYLCDKSVVDVFDGVHGASDKLQRHMSVRLSPGQDEMAAIITAAAKELHVAP EQIRIFCRDRHGLSPWCAVESMCNSYDSYYYPPIFVDIAPPLAEEDAASATTAAAAAEPF LAFLRHVESPHDRDIPVTIVRSIPELQARVPHDALVYESRGGPQYLSAITATNQLVCGAN LLYTHQRSSNDAVRGYLQHRQLVCTKVYLYDDYTAELTELFEIHIVESTPYTTLQVGLYK MMTESKRGLPLPPSHNHLAFFKGNDRCNYAFAMPMAASLTIQWNTYNHTLRDVWGSVQHE HKIVMTILPMPLEKIDLTVLVTFNGGYNNLPHVYVPLEGGSVTFREVLELMVQQLGTRLR AGAAAGYEQQLAGQARLLRLLRVRRGELVEVVEDLDTPIDLEAREDIVLDKLCPALPGYE LVNVLFCRRRSGEYYFGLPTNICVNSCLEEQGDVLLRRIVKKLGYPDQEEAMKKWILCVM NVKSRKTRTASKKEVLADLIKEVGGAPFVFVVDRPQCLLLDGIEEEEHRPESIVIKSTSK TDLSAA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/145 Sequence name : 145 Sequence length : 906 VALUES OF COMPUTED PARAMETERS Coef20 : 3.699 CoefTot : -2.173 ChDiff : -31 ZoneTo : 42 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.200 1.459 0.062 0.564 MesoH : -0.280 0.377 -0.340 0.257 MuHd_075 : 24.790 18.459 7.747 6.361 MuHd_095 : 23.893 23.775 9.185 6.575 MuHd_100 : 22.156 23.008 7.222 6.280 MuHd_105 : 22.281 27.030 7.880 5.980 Hmax_075 : 12.700 15.200 2.585 6.240 Hmax_095 : 12.200 13.800 3.233 5.260 Hmax_100 : 14.500 17.700 2.991 5.740 Hmax_105 : 12.717 14.700 4.123 7.620 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6937 0.3063 DFMC : 0.6845 0.3155
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 906 LmxM.33.4060 MRSGYVGIYNQGSTCYLNSVIQALYHLPAFRTQIYNLPNVQKDSVALALRDVFAQLEVRNRNTTTTELTKAFGWSAQEAA 80 VQHDVHELMQQLFDSLETTLKETPKKNMIRDMFGGLMIYRSRAIDGAEYLSDRLEDFYDVELVVQNKANIEESLREFSSG 160 ERIEGVSVEVVPGADATPHTIERSQHFLDCPKVLLVHPNRVAFDMETYELVTLRNVWSFDFNLSLASYVVDDASLKLDKE 240 SQEKWKKLSHRTHLSANYSLRSILTHAGDATIGHYYVYVNFDGEWVRFNDEVVESATEEDVRKSAFGGQSIQSRYRLFDN 320 ERASLLIYVNDDVKEELLSETPPPSAIVEVGRSIEEERARKEETHKVSYYLCDKSVVDVFDGVHGASDKLQRHMSVRLSP 400 GQDEMAAIITAAAKELHVAPEQIRIFCRDRHGLSPWCAVESMCNSYDSYYYPPIFVDIAPPLAEEDAASATTAAAAAEPF 480 LAFLRHVESPHDRDIPVTIVRSIPELQARVPHDALVYESRGGPQYLSAITATNQLVCGANLLYTHQRSSNDAVRGYLQHR 560 QLVCTKVYLYDDYTAELTELFEIHIVESTPYTTLQVGLYKMMTESKRGLPLPPSHNHLAFFKGNDRCNYAFAMPMAASLT 640 IQWNTYNHTLRDVWGSVQHEHKIVMTILPMPLEKIDLTVLVTFNGGYNNLPHVYVPLEGGSVTFREVLELMVQQLGTRLR 720 AGAAAGYEQQLAGQARLLRLLRVRRGELVEVVEDLDTPIDLEAREDIVLDKLCPALPGYELVNVLFCRRRSGEYYFGLPT 800 NICVNSCLEEQGDVLLRRIVKKLGYPDQEEAMKKWILCVMNVKSRKTRTASKKEVLADLIKEVGGAPFVFVVDRPQCLLL 880 DGIEEEEHRPESIVIKSTSKTDLSAA 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ...............................................P................................ 880 .......................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ LmxM.33.4060 2 -----MR|SG 0.135 . LmxM.33.4060 31 YHLPAFR|TQ 0.077 . LmxM.33.4060 42 NLPNVQK|DS 0.063 . LmxM.33.4060 50 SVALALR|DV 0.194 . LmxM.33.4060 59 FAQLEVR|NR 0.069 . LmxM.33.4060 61 QLEVRNR|NT 0.101 . LmxM.33.4060 70 TTTELTK|AF 0.066 . LmxM.33.4060 101 SLETTLK|ET 0.060 . LmxM.33.4060 105 TLKETPK|KN 0.067 . LmxM.33.4060 106 LKETPKK|NM 0.098 . LmxM.33.4060 110 PKKNMIR|DM 0.153 . LmxM.33.4060 120 GGLMIYR|SR 0.091 . LmxM.33.4060 122 LMIYRSR|AI 0.120 . LmxM.33.4060 133 AEYLSDR|LE 0.071 . LmxM.33.4060 147 ELVVQNK|AN 0.062 . LmxM.33.4060 155 NIEESLR|EF 0.096 . LmxM.33.4060 162 EFSSGER|IE 0.082 . LmxM.33.4060 183 TPHTIER|SQ 0.126 . LmxM.33.4060 192 HFLDCPK|VL 0.056 . LmxM.33.4060 200 LLVHPNR|VA 0.126 . LmxM.33.4060 214 YELVTLR|NV 0.095 . LmxM.33.4060 236 VDDASLK|LD 0.054 . LmxM.33.4060 239 ASLKLDK|ES 0.057 . LmxM.33.4060 244 DKESQEK|WK 0.059 . LmxM.33.4060 246 ESQEKWK|KL 0.079 . LmxM.33.4060 247 SQEKWKK|LS 0.087 . LmxM.33.4060 251 WKKLSHR|TH 0.090 . LmxM.33.4060 261 SANYSLR|SI 0.176 . LmxM.33.4060 287 FDGEWVR|FN 0.111 . LmxM.33.4060 302 ATEEDVR|KS 0.082 . LmxM.33.4060 303 TEEDVRK|SA 0.210 . LmxM.33.4060 314 GQSIQSR|YR 0.088 . LmxM.33.4060 316 SIQSRYR|LF 0.100 . LmxM.33.4060 322 RLFDNER|AS 0.069 . LmxM.33.4060 334 YVNDDVK|EE 0.054 . LmxM.33.4060 352 AIVEVGR|SI 0.188 . LmxM.33.4060 358 RSIEEER|AR 0.093 . LmxM.33.4060 360 IEEERAR|KE 0.092 . LmxM.33.4060 361 EEERARK|EE 0.140 . LmxM.33.4060 366 RKEETHK|VS 0.058 . LmxM.33.4060 374 SYYLCDK|SV 0.102 . LmxM.33.4060 389 VHGASDK|LQ 0.059 . LmxM.33.4060 392 ASDKLQR|HM 0.097 . LmxM.33.4060 397 QRHMSVR|LS 0.128 . LmxM.33.4060 414 IITAAAK|EL 0.071 . LmxM.33.4060 424 VAPEQIR|IF 0.081 . LmxM.33.4060 428 QIRIFCR|DR 0.120 . LmxM.33.4060 430 RIFCRDR|HG 0.067 . LmxM.33.4060 485 PFLAFLR|HV 0.087 . LmxM.33.4060 493 VESPHDR|DI 0.133 . LmxM.33.4060 501 IPVTIVR|SI 0.131 . LmxM.33.4060 509 IPELQAR|VP 0.116 . LmxM.33.4060 520 ALVYESR|GG 0.101 . LmxM.33.4060 547 LLYTHQR|SS 0.210 . LmxM.33.4060 554 SSNDAVR|GY 0.114 . LmxM.33.4060 560 RGYLQHR|QL 0.078 . LmxM.33.4060 566 RQLVCTK|VY 0.056 . LmxM.33.4060 600 LQVGLYK|MM 0.064 . LmxM.33.4060 606 KMMTESK|RG 0.058 . LmxM.33.4060 607 MMTESKR|GL 0.131 . LmxM.33.4060 622 NHLAFFK|GN 0.070 . LmxM.33.4060 626 FFKGNDR|CN 0.070 . LmxM.33.4060 651 TYNHTLR|DV 0.262 . LmxM.33.4060 662 SVQHEHK|IV 0.120 . LmxM.33.4060 674 LPMPLEK|ID 0.072 . LmxM.33.4060 705 GGSVTFR|EV 0.140 . LmxM.33.4060 718 VQQLGTR|LR 0.066 . LmxM.33.4060 720 QLGTRLR|AG 0.095 . LmxM.33.4060 736 QLAGQAR|LL 0.101 . LmxM.33.4060 739 GQARLLR|LL 0.177 . LmxM.33.4060 742 RLLRLLR|VR 0.156 . LmxM.33.4060 744 LRLLRVR|RG 0.088 . LmxM.33.4060 745 RLLRVRR|GE 0.279 . LmxM.33.4060 764 PIDLEAR|ED 0.070 . LmxM.33.4060 771 EDIVLDK|LC 0.059 . LmxM.33.4060 788 VNVLFCR|RR 0.081 . LmxM.33.4060 789 NVLFCRR|RS 0.108 . LmxM.33.4060 790 VLFCRRR|SG 0.191 . LmxM.33.4060 817 QGDVLLR|RI 0.084 . LmxM.33.4060 818 GDVLLRR|IV 0.183 . LmxM.33.4060 821 LLRRIVK|KL 0.131 . LmxM.33.4060 822 LRRIVKK|LG 0.120 . LmxM.33.4060 833 DQEEAMK|KW 0.062 . LmxM.33.4060 834 QEEAMKK|WI 0.116 . LmxM.33.4060 843 LCVMNVK|SR 0.065 . LmxM.33.4060 845 VMNVKSR|KT 0.105 . LmxM.33.4060 846 MNVKSRK|TR 0.093 . LmxM.33.4060 848 VKSRKTR|TA 0.680 *ProP* LmxM.33.4060 852 KTRTASK|KE 0.055 . LmxM.33.4060 853 TRTASKK|EV 0.172 . LmxM.33.4060 861 VLADLIK|EV 0.085 . LmxM.33.4060 874 FVFVVDR|PQ 0.089 . LmxM.33.4060 889 IEEEEHR|PE 0.093 . LmxM.33.4060 896 PESIVIK|ST 0.119 . LmxM.33.4060 900 VIKSTSK|TD 0.053 . ____________________________^_________________

  • Fasta :-

    >LmxM.33.4060 ATGCGCTCGGGGTACGTTGGCATCTACAATCAAGGTAGCACGTGCTACCTAAACTCCGTC ATACAAGCGCTGTACCACCTGCCCGCCTTCCGCACTCAAATTTATAACCTGCCGAATGTG CAAAAGGACTCCGTTGCACTCGCTCTACGTGACGTGTTTGCGCAGCTGGAGGTGCGCAAT CGTAACACCACCACGACGGAGCTGACCAAGGCTTTTGGCTGGTCAGCACAGGAGGCGGCA GTGCAGCATGACGTTCATGAGCTGATGCAGCAGCTCTTTGACAGCCTCGAAACGACGTTG AAGGAGACGCCGAAGAAGAACATGATCCGTGACATGTTCGGCGGCTTGATGATCTACCGG TCTCGTGCCATAGACGGCGCCGAATACCTCTCTGACCGCCTTGAGGACTTCTACGACGTG GAGCTGGTAGTGCAGAACAAAGCAAACATCGAGGAGTCACTGCGGGAGTTCTCATCGGGA GAGCGGATCGAGGGTGTCTCTGTGGAGGTAGTGCCTGGTGCGGACGCGACGCCGCATACG ATTGAGCGCAGCCAACACTTCCTCGACTGCCCCAAGGTGCTCTTGGTGCACCCGAACCGC GTGGCCTTTGACATGGAAACATACGAGCTGGTCACGCTACGTAATGTGTGGAGTTTTGAT TTCAACTTATCGCTGGCGAGCTACGTTGTCGATGACGCCTCGCTGAAGCTCGACAAGGAG AGTCAAGAAAAATGGAAGAAGCTTAGCCACCGCACCCACCTCAGCGCGAACTATAGCCTG CGCTCCATCCTCACGCACGCCGGCGATGCCACCATCGGGCACTACTATGTATACGTCAAC TTCGACGGGGAGTGGGTGCGCTTCAACGACGAAGTGGTCGAGTCGGCAACGGAGGAGGAT GTGCGCAAGTCCGCGTTTGGCGGGCAGTCGATTCAATCGCGCTATCGCCTCTTTGACAAC GAGCGCGCGTCGCTGCTTATCTACGTGAACGACGATGTCAAGGAGGAGCTGCTGAGCGAG ACGCCGCCACCGAGCGCGATCGTCGAGGTGGGGCGCAGCATTGAGGAGGAGCGCGCTAGG AAGGAGGAGACGCACAAGGTGAGCTACTACCTATGCGACAAGTCCGTGGTGGACGTGTTC GACGGCGTGCACGGCGCCTCCGACAAGCTGCAGCGTCACATGTCCGTGCGCCTGTCTCCC GGTCAAGATGAAATGGCCGCCATCATCACTGCCGCAGCGAAGGAGCTGCACGTAGCGCCC GAGCAGATTCGCATCTTCTGCCGAGACCGTCACGGTCTCTCCCCGTGGTGCGCTGTTGAG TCGATGTGCAACTCGTACGACTCATACTATTACCCTCCCATTTTCGTCGACATCGCGCCG CCGCTCGCGGAAGAGGATGCGGCGTCCGCCACGACCGCCGCTGCCGCCGCCGAGCCGTTC CTCGCGTTCCTCCGTCATGTCGAATCGCCGCACGACCGCGACATCCCTGTCACGATCGTC CGCTCCATCCCGGAGCTGCAAGCGCGTGTGCCGCACGATGCACTGGTGTACGAAAGCCGC GGCGGCCCGCAGTACCTGAGCGCTATCACAGCGACGAACCAACTCGTGTGTGGGGCAAAC TTACTGTACACGCACCAGCGCTCCTCCAACGACGCGGTGCGTGGGTACCTTCAGCACCGC CAGCTCGTCTGCACAAAGGTCTACCTGTACGACGACTACACCGCCGAGCTGACGGAGCTC TTTGAAATACATATTGTCGAATCCACGCCCTACACCACGCTACAGGTTGGGCTGTACAAG ATGATGACAGAGTCGAAGAGGGGTCTGCCGCTCCCTCCCTCTCACAACCACCTCGCGTTC TTCAAGGGGAACGACCGATGCAACTACGCCTTCGCGATGCCCATGGCGGCGTCGCTCACG ATTCAGTGGAACACGTACAATCACACCCTCCGAGATGTGTGGGGTAGCGTGCAGCACGAG CACAAAATTGTCATGACAATTCTTCCAATGCCGCTCGAAAAGATCGACTTGACGGTGCTG GTGACGTTCAACGGAGGCTACAATAACTTGCCTCACGTGTACGTTCCACTGGAGGGCGGC AGCGTTACTTTTCGCGAAGTTCTCGAGTTGATGGTGCAGCAGCTGGGGACTCGTCTTCGG GCAGGCGCCGCCGCGGGGTACGAACAGCAGCTTGCCGGACAGGCACGACTGCTGCGGCTG CTGCGGGTCCGGCGGGGCGAGCTAGTGGAAGTGGTGGAGGACCTGGACACTCCGATTGAT CTCGAGGCACGCGAGGACATTGTCCTGGACAAGCTGTGTCCGGCACTGCCCGGGTACGAG CTCGTCAACGTGCTCTTCTGCCGCCGCCGCTCCGGAGAGTACTACTTCGGTCTACCAACG AACATCTGCGTCAACTCGTGTCTAGAGGAGCAGGGGGATGTGCTTCTTCGACGCATCGTA AAGAAGCTCGGCTACCCTGATCAGGAGGAGGCAATGAAAAAGTGGATACTTTGTGTAATG AACGTCAAGTCGCGCAAAACGCGCACTGCCAGCAAGAAGGAGGTGCTGGCAGATCTCATC AAGGAGGTTGGCGGGGCACCGTTTGTGTTCGTTGTCGACCGTCCCCAGTGCTTGCTCCTC GACGGCATTGAAGAGGAGGAGCATCGGCCAGAGTCTATCGTTATCAAGTCTACCTCGAAG ACAGACCTCTCCGCGGCTTAG
  • Download Fasta

  • Fasta :-

    MRSGYVGIYNQGSTCYLNSVIQALYHLPAFRTQIYNLPNVQKDSVALALRDVFAQLEVRN RNTTTTELTKAFGWSAQEAAVQHDVHELMQQLFDSLETTLKETPKKNMIRDMFGGLMIYR SRAIDGAEYLSDRLEDFYDVELVVQNKANIEESLREFSSGERIEGVSVEVVPGADATPHT IERSQHFLDCPKVLLVHPNRVAFDMETYELVTLRNVWSFDFNLSLASYVVDDASLKLDKE SQEKWKKLSHRTHLSANYSLRSILTHAGDATIGHYYVYVNFDGEWVRFNDEVVESATEED VRKSAFGGQSIQSRYRLFDNERASLLIYVNDDVKEELLSETPPPSAIVEVGRSIEEERAR KEETHKVSYYLCDKSVVDVFDGVHGASDKLQRHMSVRLSPGQDEMAAIITAAAKELHVAP EQIRIFCRDRHGLSPWCAVESMCNSYDSYYYPPIFVDIAPPLAEEDAASATTAAAAAEPF LAFLRHVESPHDRDIPVTIVRSIPELQARVPHDALVYESRGGPQYLSAITATNQLVCGAN LLYTHQRSSNDAVRGYLQHRQLVCTKVYLYDDYTAELTELFEIHIVESTPYTTLQVGLYK MMTESKRGLPLPPSHNHLAFFKGNDRCNYAFAMPMAASLTIQWNTYNHTLRDVWGSVQHE HKIVMTILPMPLEKIDLTVLVTFNGGYNNLPHVYVPLEGGSVTFREVLELMVQQLGTRLR AGAAAGYEQQLAGQARLLRLLRVRRGELVEVVEDLDTPIDLEAREDIVLDKLCPALPGYE LVNVLFCRRRSGEYYFGLPTNICVNSCLEEQGDVLLRRIVKKLGYPDQEEAMKKWILCVM NVKSRKTRTASKKEVLADLIKEVGGAPFVFVVDRPQCLLLDGIEEEEHRPESIVIKSTSK TDLSAA

  • title: Active Site
  • coordinates: N10,C15,H274,D290
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.33.4060295 SEVVESATEE0.992unspLmxM.33.4060295 SEVVESATEE0.992unspLmxM.33.4060295 SEVVESATEE0.992unspLmxM.33.4060353 SEVGRSIEEE0.996unspLmxM.33.4060399 SSVRLSPGQD0.997unspLmxM.33.4060489 SRHVESPHDR0.995unspLmxM.33.4060791 SCRRRSGEYY0.997unspLmxM.33.4060851 STRTASKKEV0.997unspLmxM.33.4060899 SIKSTSKTDL0.994unspLmxM.33.406099 TSLETTLKET0.991unspLmxM.33.4060241 SLDKESQEKW0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India