_IDPredictionOTHERSPmTPCS_Position
LmxM.34.2410OTHER0.9999770.0000020.000021
No Results
  • Fasta :-

    >LmxM.34.2410 MSDTTGDPSLLSQLQGSKAVVKRRRSMGTKSSTAFSPVKRRSPKSSATGATAAASTAAPA PPVLAFRKYKTTKTTARDADGNTAPNENGGHGDDHRPLEASPGDLQNFTTSLERKSLTAI NRSAELPCVLGTDSPSAAQASSPHEDSHGCQDSASIKEPLTGASVSTSCEALSSGANEGA NVVNTDALQPLRRPSRAAENGSPESDTAAAEESLCSQTGGGAFKNADTTKHRAGDGSLRL CSSNAATQKTTSPPRARLNQPSKDICPSSPSTAEGISPPNVSENLDGTIKPTAMIENADS SNVLVSRPLSASHSLSKGSADDATSIASAGQAVQGRDEAGAARVLLVVPELSPRNGSSPP HQSLSHVDGPPPLQSRAGVTAMGERNNTDSIDSFSDKGSLASRTLGLKPQAPPVQPSESA EANKSSLSTSNRSFSFVSAKAVSALSISRLHAAPIPLRNFGATCYLNAVVQCLLCTPDLL HTLNNDRKRIVREWERSYRSEGKRKSDDAQRRSCAERKAPATSSLIDLGTAHPVHHIPVP QLLLSLKAACAECNKEFSSNGQKDAHEFLITLLGVIDKEVSRSKSDSQETFKDFEDEKKS DAYARWVSWMQQESNSTVYDVFGGITGCTVKCSSCELTSYRFEVLLHISLPISYRSRSQG GRTAIQLSNRGLDDQEEPKQVAAVDELLREMFFSKRGESLNGPMQLRCDRCKQRRDKSLW YSMEYWSPILVLHLKRFNNAGVKNEAAVVFPYTFHPHRYVKYQLYGVCCHRGTSSSGHYT AYTYVEEEDKKAVVRKKALAVAAVSNSYQSALKGARCDRIVSPLTLLGGGDTGIFAWSNG VSVRNGGSMVRAGSDTFSQKGNGRADGKDQARSAGKTAKAGKWYLCNDKNITEVTAPDVL SMTKEAYILFYRRVDDEDVTII
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/194 Sequence name : 194 Sequence length : 922 VALUES OF COMPUTED PARAMETERS Coef20 : 3.575 CoefTot : 0.112 ChDiff : 14 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.429 1.388 0.323 0.581 MesoH : -0.284 0.299 -0.274 0.148 MuHd_075 : 28.085 17.960 7.385 5.542 MuHd_095 : 26.356 3.510 5.567 1.411 MuHd_100 : 21.990 1.889 4.814 0.813 MuHd_105 : 10.813 6.618 2.001 0.938 Hmax_075 : 8.283 5.717 -0.414 2.823 Hmax_095 : 7.800 0.525 -0.559 1.260 Hmax_100 : 7.200 -0.200 -0.595 0.730 Hmax_105 : 5.833 2.900 -0.140 1.270 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9355 0.0645 DFMC : 0.9059 0.0941
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 922 LmxM.34.2410 MSDTTGDPSLLSQLQGSKAVVKRRRSMGTKSSTAFSPVKRRSPKSSATGATAAASTAAPAPPVLAFRKYKTTKTTARDAD 80 GNTAPNENGGHGDDHRPLEASPGDLQNFTTSLERKSLTAINRSAELPCVLGTDSPSAAQASSPHEDSHGCQDSASIKEPL 160 TGASVSTSCEALSSGANEGANVVNTDALQPLRRPSRAAENGSPESDTAAAEESLCSQTGGGAFKNADTTKHRAGDGSLRL 240 CSSNAATQKTTSPPRARLNQPSKDICPSSPSTAEGISPPNVSENLDGTIKPTAMIENADSSNVLVSRPLSASHSLSKGSA 320 DDATSIASAGQAVQGRDEAGAARVLLVVPELSPRNGSSPPHQSLSHVDGPPPLQSRAGVTAMGERNNTDSIDSFSDKGSL 400 ASRTLGLKPQAPPVQPSESAEANKSSLSTSNRSFSFVSAKAVSALSISRLHAAPIPLRNFGATCYLNAVVQCLLCTPDLL 480 HTLNNDRKRIVREWERSYRSEGKRKSDDAQRRSCAERKAPATSSLIDLGTAHPVHHIPVPQLLLSLKAACAECNKEFSSN 560 GQKDAHEFLITLLGVIDKEVSRSKSDSQETFKDFEDEKKSDAYARWVSWMQQESNSTVYDVFGGITGCTVKCSSCELTSY 640 RFEVLLHISLPISYRSRSQGGRTAIQLSNRGLDDQEEPKQVAAVDELLREMFFSKRGESLNGPMQLRCDRCKQRRDKSLW 720 YSMEYWSPILVLHLKRFNNAGVKNEAAVVFPYTFHPHRYVKYQLYGVCCHRGTSSSGHYTAYTYVEEEDKKAVVRKKALA 800 VAAVSNSYQSALKGARCDRIVSPLTLLGGGDTGIFAWSNGVSVRNGGSMVRAGSDTFSQKGNGRADGKDQARSAGKTAKA 880 GKWYLCNDKNITEVTAPDVLSMTKEAYILFYRRVDDEDVTII 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 .......................................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.34.2410 18 SQLQGSK|AV 0.067 . LmxM.34.2410 22 GSKAVVK|RR 0.062 . LmxM.34.2410 23 SKAVVKR|RR 0.318 . LmxM.34.2410 24 KAVVKRR|RS 0.155 . LmxM.34.2410 25 AVVKRRR|SM 0.325 . LmxM.34.2410 30 RRSMGTK|SS 0.103 . LmxM.34.2410 39 TAFSPVK|RR 0.062 . LmxM.34.2410 40 AFSPVKR|RS 0.196 . LmxM.34.2410 41 FSPVKRR|SP 0.226 . LmxM.34.2410 44 VKRRSPK|SS 0.416 . LmxM.34.2410 67 PPVLAFR|KY 0.085 . LmxM.34.2410 68 PVLAFRK|YK 0.087 . LmxM.34.2410 70 LAFRKYK|TT 0.179 . LmxM.34.2410 73 RKYKTTK|TT 0.070 . LmxM.34.2410 77 TTKTTAR|DA 0.211 . LmxM.34.2410 96 GHGDDHR|PL 0.121 . LmxM.34.2410 114 FTTSLER|KS 0.071 . LmxM.34.2410 115 TTSLERK|SL 0.207 . LmxM.34.2410 122 SLTAINR|SA 0.125 . LmxM.34.2410 157 QDSASIK|EP 0.067 . LmxM.34.2410 192 DALQPLR|RP 0.071 . LmxM.34.2410 193 ALQPLRR|PS 0.188 . LmxM.34.2410 196 PLRRPSR|AA 0.417 . LmxM.34.2410 224 TGGGAFK|NA 0.075 . LmxM.34.2410 230 KNADTTK|HR 0.069 . LmxM.34.2410 232 ADTTKHR|AG 0.102 . LmxM.34.2410 239 AGDGSLR|LC 0.078 . LmxM.34.2410 249 SNAATQK|TT 0.076 . LmxM.34.2410 255 KTTSPPR|AR 0.071 . LmxM.34.2410 257 TSPPRAR|LN 0.100 . LmxM.34.2410 263 RLNQPSK|DI 0.097 . LmxM.34.2410 290 NLDGTIK|PT 0.064 . LmxM.34.2410 307 SNVLVSR|PL 0.112 . LmxM.34.2410 317 ASHSLSK|GS 0.068 . LmxM.34.2410 336 GQAVQGR|DE 0.125 . LmxM.34.2410 343 DEAGAAR|VL 0.082 . LmxM.34.2410 354 VPELSPR|NG 0.085 . LmxM.34.2410 376 PPPLQSR|AG 0.081 . LmxM.34.2410 385 VTAMGER|NN 0.099 . LmxM.34.2410 397 IDSFSDK|GS 0.082 . LmxM.34.2410 403 KGSLASR|TL 0.105 . LmxM.34.2410 408 SRTLGLK|PQ 0.055 . LmxM.34.2410 424 ESAEANK|SS 0.069 . LmxM.34.2410 432 SLSTSNR|SF 0.182 . LmxM.34.2410 440 FSFVSAK|AV 0.101 . LmxM.34.2410 449 SALSISR|LH 0.068 . LmxM.34.2410 458 AAPIPLR|NF 0.077 . LmxM.34.2410 487 HTLNNDR|KR 0.070 . LmxM.34.2410 488 TLNNDRK|RI 0.083 . LmxM.34.2410 489 LNNDRKR|IV 0.440 . LmxM.34.2410 492 DRKRIVR|EW 0.377 . LmxM.34.2410 496 IVREWER|SY 0.113 . LmxM.34.2410 499 EWERSYR|SE 0.400 . LmxM.34.2410 503 SYRSEGK|RK 0.063 . LmxM.34.2410 504 YRSEGKR|KS 0.382 . LmxM.34.2410 505 RSEGKRK|SD 0.242 . LmxM.34.2410 511 KSDDAQR|RS 0.086 . LmxM.34.2410 512 SDDAQRR|SC 0.184 . LmxM.34.2410 517 RRSCAER|KA 0.122 . LmxM.34.2410 518 RSCAERK|AP 0.079 . LmxM.34.2410 547 QLLLSLK|AA 0.068 . LmxM.34.2410 555 ACAECNK|EF 0.059 . LmxM.34.2410 563 FSSNGQK|DA 0.095 . LmxM.34.2410 578 LLGVIDK|EV 0.084 . LmxM.34.2410 582 IDKEVSR|SK 0.188 . LmxM.34.2410 584 KEVSRSK|SD 0.083 . LmxM.34.2410 592 DSQETFK|DF 0.086 . LmxM.34.2410 598 KDFEDEK|KS 0.064 . LmxM.34.2410 599 DFEDEKK|SD 0.112 . LmxM.34.2410 605 KSDAYAR|WV 0.236 . LmxM.34.2410 631 ITGCTVK|CS 0.068 . LmxM.34.2410 641 CELTSYR|FE 0.069 . LmxM.34.2410 655 SLPISYR|SR 0.230 . LmxM.34.2410 657 PISYRSR|SQ 0.157 . LmxM.34.2410 662 SRSQGGR|TA 0.132 . LmxM.34.2410 670 AIQLSNR|GL 0.158 . LmxM.34.2410 679 DDQEEPK|QV 0.083 . LmxM.34.2410 689 AVDELLR|EM 0.069 . LmxM.34.2410 695 REMFFSK|RG 0.061 . LmxM.34.2410 696 EMFFSKR|GE 0.182 . LmxM.34.2410 707 NGPMQLR|CD 0.078 . LmxM.34.2410 710 MQLRCDR|CK 0.149 . LmxM.34.2410 712 LRCDRCK|QR 0.070 . LmxM.34.2410 714 CDRCKQR|RD 0.079 . LmxM.34.2410 715 DRCKQRR|DK 0.246 . LmxM.34.2410 717 CKQRRDK|SL 0.270 . LmxM.34.2410 735 ILVLHLK|RF 0.060 . LmxM.34.2410 736 LVLHLKR|FN 0.205 . LmxM.34.2410 743 FNNAGVK|NE 0.059 . LmxM.34.2410 758 YTFHPHR|YV 0.153 . LmxM.34.2410 761 HPHRYVK|YQ 0.170 . LmxM.34.2410 771 YGVCCHR|GT 0.109 . LmxM.34.2410 790 YVEEEDK|KA 0.056 . LmxM.34.2410 791 VEEEDKK|AV 0.096 . LmxM.34.2410 795 DKKAVVR|KK 0.086 . LmxM.34.2410 796 KKAVVRK|KA 0.154 . LmxM.34.2410 797 KAVVRKK|AL 0.118 . LmxM.34.2410 813 SYQSALK|GA 0.064 . LmxM.34.2410 816 SALKGAR|CD 0.085 . LmxM.34.2410 819 KGARCDR|IV 0.423 . LmxM.34.2410 844 SNGVSVR|NG 0.122 . LmxM.34.2410 851 NGGSMVR|AG 0.093 . LmxM.34.2410 860 SDTFSQK|GN 0.077 . LmxM.34.2410 864 SQKGNGR|AD 0.113 . LmxM.34.2410 868 NGRADGK|DQ 0.067 . LmxM.34.2410 872 DGKDQAR|SA 0.264 . LmxM.34.2410 876 QARSAGK|TA 0.076 . LmxM.34.2410 879 SAGKTAK|AG 0.075 . LmxM.34.2410 882 KTAKAGK|WY 0.063 . LmxM.34.2410 889 WYLCNDK|NI 0.057 . LmxM.34.2410 904 DVLSMTK|EA 0.058 . LmxM.34.2410 912 AYILFYR|RV 0.115 . LmxM.34.2410 913 YILFYRR|VD 0.095 . ____________________________^_________________
  • Fasta :-

    >LmxM.34.2410 ATGTCGGACACTACCGGCGACCCTTCCTTGCTCAGTCAACTGCAAGGAAGCAAAGCAGTG GTGAAGCGAAGGCGTAGCATGGGCACCAAGTCGTCCACTGCGTTCTCGCCTGTGAAGCGA CGCTCTCCGAAGTCAAGCGCCACCGGTGCAACTGCTGCCGCCTCCACCGCCGCACCGGCA CCCCCCGTTTTGGCGTTTCGGAAGTACAAGACGACAAAAACGACTGCAAGGGACGCGGAC GGCAACACCGCGCCCAACGAAAATGGTGGTCACGGCGACGACCACAGGCCTCTGGAAGCG TCACCCGGCGATCTGCAGAATTTTACCACGTCTCTAGAGCGCAAATCTCTGACCGCGATC AACAGAAGTGCCGAGTTGCCATGCGTCTTAGGCACCGACTCGCCGTCTGCTGCACAGGCT TCCAGTCCTCACGAGGACTCACATGGGTGCCAGGACAGCGCATCGATAAAAGAACCGCTG ACGGGCGCTTCAGTGAGTACTTCGTGCGAAGCGCTGTCGTCTGGTGCGAATGAGGGAGCC AATGTGGTCAACACGGACGCTCTGCAGCCGTTGAGGAGGCCAAGTCGAGCTGCTGAGAAC GGGTCTCCTGAATCCGACACGGCAGCTGCAGAGGAGTCACTCTGTAGCCAAACCGGCGGT GGTGCATTCAAAAATGCTGACACTACAAAGCACAGAGCCGGAGACGGGTCCCTTCGCCTT TGCTCATCCAATGCCGCGACGCAGAAAACGACGTCGCCCCCACGTGCGCGTCTGAACCAA CCTTCAAAAGACATCTGCCCTTCTAGCCCCTCCACAGCGGAAGGGATCTCTCCCCCGAAT GTCTCAGAGAATTTGGACGGCACCATCAAACCCACAGCGATGATCGAGAATGCCGACTCA AGCAATGTGCTTGTCTCTCGTCCACTATCTGCTTCTCACAGCCTCAGTAAAGGATCTGCT GACGATGCAACATCCATCGCCAGTGCGGGACAGGCCGTGCAAGGGCGGGATGAGGCAGGT GCGGCAAGAGTGTTGTTGGTGGTGCCGGAGCTGTCTCCCAGAAACGGGTCTAGCCCACCT CATCAAAGCCTCTCGCACGTTGACGGGCCCCCTCCCCTGCAGTCACGGGCGGGCGTGACG GCTATGGGAGAGAGGAACAACACGGATAGCATCGACTCCTTTTCCGACAAAGGATCTTTG GCCTCACGCACACTGGGCCTCAAGCCTCAAGCTCCGCCAGTGCAACCGTCAGAATCTGCA GAGGCCAACAAGTCGTCGTTGTCGACGTCAAACCGTAGCTTTTCATTTGTCAGTGCGAAG GCGGTGTCAGCGCTCTCCATCTCTCGACTGCACGCCGCGCCGATTCCACTGCGCAATTTC GGCGCGACGTGCTATCTGAACGCGGTCGTGCAGTGCCTGCTATGTACACCTGACCTGCTG CACACGCTGAACAATGACCGTAAACGGATCGTGCGCGAATGGGAGAGGAGCTACCGCTCC GAGGGGAAGCGAAAGTCAGACGACGCCCAACGGCGCAGCTGTGCTGAGCGCAAGGCCCCG GCGACGTCTTCGCTGATTGATTTGGGGACCGCACACCCCGTGCACCACATCCCGGTTCCG CAGCTTCTTCTCAGCCTCAAGGCGGCTTGTGCGGAGTGTAACAAGGAGTTTTCGTCTAAT GGGCAGAAAGACGCGCATGAGTTTCTCATCACACTGTTGGGGGTGATCGACAAAGAGGTT AGCCGCAGCAAGTCAGACAGCCAGGAAACCTTCAAAGACTTCGAAGATGAGAAAAAGAGT GATGCGTACGCGCGATGGGTGAGCTGGATGCAGCAGGAGAGCAACTCGACCGTGTACGAC GTTTTTGGCGGAATCACCGGCTGCACCGTCAAGTGCTCTAGCTGTGAACTGACCTCCTAC CGCTTTGAAGTGCTGCTGCACATCTCCTTGCCCATATCTTACCGTTCCCGCTCTCAGGGC GGCAGAACCGCCATCCAGTTGTCCAATAGAGGGCTCGACGACCAGGAGGAGCCTAAACAG GTTGCTGCCGTTGACGAGCTGCTGCGCGAGATGTTCTTTAGCAAGCGTGGGGAGTCCCTG AATGGTCCGATGCAATTGAGGTGCGACCGTTGCAAGCAGCGGCGGGACAAGAGTCTATGG TATTCGATGGAGTACTGGTCGCCGATCCTGGTGCTTCATTTGAAGCGCTTCAACAACGCG GGCGTCAAGAATGAGGCGGCGGTAGTGTTTCCGTACACGTTTCACCCGCACCGGTATGTC AAGTATCAGCTGTACGGCGTCTGCTGCCACCGCGGCACTTCCTCCTCCGGGCACTATACG GCGTACACCTACGTGGAGGAGGAGGACAAGAAAGCCGTAGTGCGCAAAAAAGCCCTCGCT GTTGCGGCTGTCTCCAATTCCTACCAGTCCGCGCTGAAAGGTGCGCGATGCGACCGCATC GTCAGCCCCCTGACACTTCTGGGCGGAGGTGACACCGGTATCTTCGCCTGGTCCAACGGC GTCAGCGTACGAAACGGCGGCAGTATGGTTCGGGCTGGTAGTGATACATTCAGCCAAAAG GGAAACGGAAGGGCTGATGGAAAAGATCAGGCGCGTTCGGCAGGGAAGACGGCGAAGGCT GGCAAATGGTATCTGTGCAACGACAAAAACATCACCGAGGTGACGGCGCCGGACGTGCTG TCGATGACGAAGGAGGCATACATCCTTTTTTACCGGCGCGTTGATGATGAGGATGTGACG ATCATCTGA
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  • Fasta :-

    MSDTTGDPSLLSQLQGSKAVVKRRRSMGTKSSTAFSPVKRRSPKSSATGATAAASTAAPA PPVLAFRKYKTTKTTARDADGNTAPNENGGHGDDHRPLEASPGDLQNFTTSLERKSLTAI NRSAELPCVLGTDSPSAAQASSPHEDSHGCQDSASIKEPLTGASVSTSCEALSSGANEGA NVVNTDALQPLRRPSRAAENGSPESDTAAAEESLCSQTGGGAFKNADTTKHRAGDGSLRL CSSNAATQKTTSPPRARLNQPSKDICPSSPSTAEGISPPNVSENLDGTIKPTAMIENADS SNVLVSRPLSASHSLSKGSADDATSIASAGQAVQGRDEAGAARVLLVVPELSPRNGSSPP HQSLSHVDGPPPLQSRAGVTAMGERNNTDSIDSFSDKGSLASRTLGLKPQAPPVQPSESA EANKSSLSTSNRSFSFVSAKAVSALSISRLHAAPIPLRNFGATCYLNAVVQCLLCTPDLL HTLNNDRKRIVREWERSYRSEGKRKSDDAQRRSCAERKAPATSSLIDLGTAHPVHHIPVP QLLLSLKAACAECNKEFSSNGQKDAHEFLITLLGVIDKEVSRSKSDSQETFKDFEDEKKS DAYARWVSWMQQESNSTVYDVFGGITGCTVKCSSCELTSYRFEVLLHISLPISYRSRSQG GRTAIQLSNRGLDDQEEPKQVAAVDELLREMFFSKRGESLNGPMQLRCDRCKQRRDKSLW YSMEYWSPILVLHLKRFNNAGVKNEAAVVFPYTFHPHRYVKYQLYGVCCHRGTSSSGHYT AYTYVEEEDKKAVVRKKALAVAAVSNSYQSALKGARCDRIVSPLTLLGGGDTGIFAWSNG VSVRNGGSMVRAGSDTFSQKGNGRADGKDQARSAGKTAKAGKWYLCNDKNITEVTAPDVL SMTKEAYILFYRRVDDEDVTII

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.34.2410101 SPLEASPGDL0.993unspLmxM.34.2410101 SPLEASPGDL0.993unspLmxM.34.2410101 SPLEASPGDL0.993unspLmxM.34.2410142 SAQASSPHED0.994unspLmxM.34.2410155 SQDSASIKEP0.995unspLmxM.34.2410252 SQKTTSPPRA0.997unspLmxM.34.2410365 SHQSLSHVDG0.993unspLmxM.34.2410393 SDSIDSFSDK0.993unspLmxM.34.2410395 SIDSFSDKGS0.991unspLmxM.34.2410435 SNRSFSFVSA0.991unspLmxM.34.2410506 SGKRKSDDAQ0.995unspLmxM.34.2410581 SDKEVSRSKS0.991unspLmxM.34.2410583 SEVSRSKSDS0.997unspLmxM.34.2410585 SSRSKSDSQE0.99unspLmxM.34.2410587 SSKSDSQETF0.996unspLmxM.34.241026 SKRRRSMGTK0.995unspLmxM.34.241042 SVKRRSPKSS0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India