LmxM.36.4300 | trypanothione synthetase-like protein

  • Computed_GO_Component_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
LmxM.36.4300OTHER0.9965220.0032700.000208
No Results

  • Fasta :-

    >LmxM.36.4300 MTVKTASEMSLLPYGEHQGSFRGVVACSNRDDGYFSGENNYVGTSIYTGFRYQCVEYARR FLLLTTGCVFANCGRASEIYAMDYITHVETGALYTLHHHNNDGTATQKPAPGDIIIYPYH PELTPWGHVGVISFVDDNRVGIAEQNHYFGAFTSPNESYLDGERCVARYTTLTFDEATKT WRIEEPGSMPSAVGWLSYPDAPTREQIHSPFTPLPCAIKVRSTPFHQDDHPFLTHYHLYD GFEIPSGCVRHAYGMRNGTAETLVGATSAAARVLRFTLHLLFHRGRLGPAFRALPTNPLN ATLPEGAGAGTEVCREVDALFKVLAEEDVVNATETTPDVLRKAVATYFNIPLEWVMAMER DFAKGETHMAAVVSFYPNIVTDSAALETFRATRKNAGTEAAPAAGTVPQTTANASTPVAE EPLTVSYPGTVEEFPVKNPHDEAWCLAKVNFGSARVMTELSQLSKVTKELTERISLMTPS MRSFISTQYRMDFAGYLKVVEAVYGPRTGFTIVVSDDQPMDDLLRELVMTVQNLCELVEY PVRVVNEKDLTFVNGMLHATPSAASPEAGSQTTNIAPSEAYDVDFVYALCEWPRILTCKE ATHAALYRAAVDPTSDVVFAKPLWSHLCSGAMNVSDDAERAHHTHSPRSTSVRFFDVCRR LYLLASPKQQPTTWDLEVSEYKDSCRRIHVNAETVPMHSPAHLNADSLMINLAGSCFMGH IGGTLRSESENTDIHVGHPASLMFMFPAD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/656 Sequence name : 656 Sequence length : 749 VALUES OF COMPUTED PARAMETERS Coef20 : 3.344 CoefTot : 0.140 ChDiff : -28 ZoneTo : 7 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.406 1.106 0.170 0.524 MesoH : -0.364 0.291 -0.333 0.225 MuHd_075 : 19.082 11.693 6.222 3.301 MuHd_095 : 15.839 3.519 3.816 1.146 MuHd_100 : 12.125 2.306 2.570 1.347 MuHd_105 : 11.830 7.351 4.043 2.269 Hmax_075 : 12.367 6.533 1.148 3.045 Hmax_095 : 7.175 3.200 -0.584 2.056 Hmax_100 : 6.200 1.600 -1.718 1.850 Hmax_105 : 4.800 3.033 -1.553 2.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9479 0.0521 DFMC : 0.8217 0.1783
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 749 LmxM.36.4300 MTVKTASEMSLLPYGEHQGSFRGVVACSNRDDGYFSGENNYVGTSIYTGFRYQCVEYARRFLLLTTGCVFANCGRASEIY 80 AMDYITHVETGALYTLHHHNNDGTATQKPAPGDIIIYPYHPELTPWGHVGVISFVDDNRVGIAEQNHYFGAFTSPNESYL 160 DGERCVARYTTLTFDEATKTWRIEEPGSMPSAVGWLSYPDAPTREQIHSPFTPLPCAIKVRSTPFHQDDHPFLTHYHLYD 240 GFEIPSGCVRHAYGMRNGTAETLVGATSAAARVLRFTLHLLFHRGRLGPAFRALPTNPLNATLPEGAGAGTEVCREVDAL 320 FKVLAEEDVVNATETTPDVLRKAVATYFNIPLEWVMAMERDFAKGETHMAAVVSFYPNIVTDSAALETFRATRKNAGTEA 400 APAAGTVPQTTANASTPVAEEPLTVSYPGTVEEFPVKNPHDEAWCLAKVNFGSARVMTELSQLSKVTKELTERISLMTPS 480 MRSFISTQYRMDFAGYLKVVEAVYGPRTGFTIVVSDDQPMDDLLRELVMTVQNLCELVEYPVRVVNEKDLTFVNGMLHAT 560 PSAASPEAGSQTTNIAPSEAYDVDFVYALCEWPRILTCKEATHAALYRAAVDPTSDVVFAKPLWSHLCSGAMNVSDDAER 640 AHHTHSPRSTSVRFFDVCRRLYLLASPKQQPTTWDLEVSEYKDSCRRIHVNAETVPMHSPAHLNADSLMINLAGSCFMGH 720 IGGTLRSESENTDIHVGHPASLMFMFPAD 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.36.4300 4 ---MTVK|TA 0.064 . LmxM.36.4300 22 EHQGSFR|GV 0.130 . LmxM.36.4300 30 VVACSNR|DD 0.110 . LmxM.36.4300 51 SIYTGFR|YQ 0.079 . LmxM.36.4300 59 QCVEYAR|RF 0.068 . LmxM.36.4300 60 CVEYARR|FL 0.096 . LmxM.36.4300 75 VFANCGR|AS 0.088 . LmxM.36.4300 108 DGTATQK|PA 0.060 . LmxM.36.4300 139 SFVDDNR|VG 0.080 . LmxM.36.4300 164 SYLDGER|CV 0.079 . LmxM.36.4300 168 GERCVAR|YT 0.126 . LmxM.36.4300 179 TFDEATK|TW 0.068 . LmxM.36.4300 182 EATKTWR|IE 0.086 . LmxM.36.4300 204 YPDAPTR|EQ 0.090 . LmxM.36.4300 219 PLPCAIK|VR 0.058 . LmxM.36.4300 221 PCAIKVR|ST 0.164 . LmxM.36.4300 250 IPSGCVR|HA 0.147 . LmxM.36.4300 256 RHAYGMR|NG 0.085 . LmxM.36.4300 272 ATSAAAR|VL 0.107 . LmxM.36.4300 275 AAARVLR|FT 0.352 . LmxM.36.4300 284 LHLLFHR|GR 0.064 . LmxM.36.4300 286 LLFHRGR|LG 0.076 . LmxM.36.4300 292 RLGPAFR|AL 0.095 . LmxM.36.4300 315 AGTEVCR|EV 0.130 . LmxM.36.4300 322 EVDALFK|VL 0.053 . LmxM.36.4300 341 TTPDVLR|KA 0.085 . LmxM.36.4300 342 TPDVLRK|AV 0.173 . LmxM.36.4300 360 WVMAMER|DF 0.132 . LmxM.36.4300 364 MERDFAK|GE 0.074 . LmxM.36.4300 390 AALETFR|AT 0.092 . LmxM.36.4300 393 ETFRATR|KN 0.190 . LmxM.36.4300 394 TFRATRK|NA 0.115 . LmxM.36.4300 437 VEEFPVK|NP 0.060 . LmxM.36.4300 448 EAWCLAK|VN 0.066 . LmxM.36.4300 455 VNFGSAR|VM 0.087 . LmxM.36.4300 465 ELSQLSK|VT 0.062 . LmxM.36.4300 468 QLSKVTK|EL 0.079 . LmxM.36.4300 473 TKELTER|IS 0.074 . LmxM.36.4300 482 LMTPSMR|SF 0.114 . LmxM.36.4300 490 FISTQYR|MD 0.132 . LmxM.36.4300 498 DFAGYLK|VV 0.069 . LmxM.36.4300 507 EAVYGPR|TG 0.080 . LmxM.36.4300 525 PMDDLLR|EL 0.065 . LmxM.36.4300 543 LVEYPVR|VV 0.095 . LmxM.36.4300 548 VRVVNEK|DL 0.085 . LmxM.36.4300 594 ALCEWPR|IL 0.115 . LmxM.36.4300 599 PRILTCK|EA 0.078 . LmxM.36.4300 608 THAALYR|AA 0.125 . LmxM.36.4300 621 SDVVFAK|PL 0.088 . LmxM.36.4300 640 VSDDAER|AH 0.077 . LmxM.36.4300 648 HHTHSPR|ST 0.189 . LmxM.36.4300 653 PRSTSVR|FF 0.184 . LmxM.36.4300 659 RFFDVCR|RL 0.068 . LmxM.36.4300 660 FFDVCRR|LY 0.076 . LmxM.36.4300 668 YLLASPK|QQ 0.058 . LmxM.36.4300 682 LEVSEYK|DS 0.070 . LmxM.36.4300 686 EYKDSCR|RI 0.093 . LmxM.36.4300 687 YKDSCRR|IH 0.099 . LmxM.36.4300 726 HIGGTLR|SE 0.120 . ____________________________^_________________

  • Fasta :-

    >LmxM.36.4300 ATGACTGTCAAAACCGCATCAGAGATGTCGCTGCTACCATATGGTGAGCATCAAGGCAGC TTCCGCGGTGTTGTGGCGTGCTCTAACCGCGATGACGGCTACTTCAGCGGCGAGAACAAC TACGTGGGCACGTCAATCTACACCGGGTTTCGCTACCAATGCGTGGAGTACGCGCGCCGA TTTCTGCTGCTGACGACCGGCTGCGTCTTTGCGAACTGCGGCAGAGCCAGCGAGATCTAC GCGATGGATTACATCACACACGTGGAGACGGGGGCACTGTACACTCTCCATCACCACAAC AACGACGGCACAGCAACGCAGAAGCCGGCGCCGGGTGACATCATAATCTACCCTTACCAC CCAGAACTAACGCCGTGGGGCCACGTCGGTGTCATATCCTTCGTTGACGATAACCGCGTC GGCATCGCAGAGCAGAACCACTACTTTGGCGCTTTCACCTCGCCAAATGAGTCGTACCTC GACGGTGAGCGGTGCGTCGCACGGTACACCACGCTCACCTTCGACGAGGCGACCAAGACA TGGCGCATCGAGGAACCTGGATCGATGCCGAGTGCCGTGGGTTGGCTGTCGTACCCTGAT GCCCCGACTCGCGAGCAGATTCACTCGCCATTCACGCCGCTTCCCTGCGCGATCAAGGTG CGCTCGACACCATTCCACCAAGACGACCATCCTTTCCTCACACACTACCACCTCTACGAC GGCTTTGAGATCCCCAGCGGATGTGTGAGGCACGCGTACGGCATGCGAAACGGCACCGCC GAAACGTTGGTAGGTGCGACAAGCGCCGCCGCTCGCGTGCTGCGGTTTACACTTCATCTT CTCTTCCATCGCGGCCGCCTCGGCCCTGCCTTTCGCGCGTTGCCCACGAACCCGCTGAAT GCCACACTGCCGGAGGGTGCGGGTGCAGGCACAGAGGTGTGCCGCGAGGTGGACGCACTC TTCAAAGTGCTCGCCGAGGAAGATGTCGTCAACGCCACCGAGACGACCCCCGACGTGCTG CGGAAGGCTGTGGCAACGTACTTCAACATCCCACTCGAGTGGGTGATGGCCATGGAGCGG GACTTCGCGAAAGGGGAGACACACATGGCAGCGGTCGTCAGCTTCTACCCAAACATTGTG ACAGACTCGGCCGCCCTGGAGACATTTCGTGCAACACGCAAGAATGCGGGGACAGAGGCG GCGCCGGCTGCTGGGACGGTGCCGCAGACCACAGCCAACGCCAGTACCCCCGTCGCCGAA GAGCCCCTCACCGTGAGCTACCCAGGCACTGTCGAGGAGTTCCCGGTCAAGAACCCTCAT GATGAGGCGTGGTGCCTGGCAAAGGTGAATTTCGGCAGTGCGCGCGTCATGACAGAACTA TCGCAGCTCAGTAAGGTGACAAAAGAGCTGACGGAGAGGATTTCGCTCATGACACCATCC ATGCGCTCCTTCATCTCCACGCAGTATCGCATGGACTTTGCGGGCTACCTCAAGGTCGTT GAGGCCGTCTACGGCCCTCGCACGGGCTTCACGATTGTCGTGAGCGATGACCAACCGATG GACGACTTGCTGCGGGAGCTTGTCATGACTGTGCAGAATTTGTGCGAGCTCGTCGAGTAC CCGGTCCGCGTTGTGAATGAGAAAGACCTAACGTTTGTGAATGGCATGCTGCACGCCACT CCATCAGCGGCCTCTCCAGAGGCGGGCAGCCAAACGACCAACATCGCGCCTAGCGAGGCA TACGACGTGGACTTTGTGTATGCGCTGTGCGAATGGCCGCGCATCTTGACGTGCAAAGAG GCAACCCACGCTGCCCTGTACCGCGCCGCTGTGGACCCAACGTCGGATGTTGTATTTGCG AAGCCGCTGTGGTCGCACCTCTGCTCTGGTGCGATGAACGTTAGCGACGACGCAGAGAGG GCGCACCACACTCACTCGCCGCGCTCCACGTCGGTGCGCTTTTTCGATGTGTGCCGCCGC CTGTATCTGCTGGCATCGCCGAAGCAGCAGCCGACAACATGGGATTTGGAAGTATCCGAG TACAAGGATAGCTGCCGCCGCATTCACGTCAACGCCGAGACGGTGCCGATGCACTCTCCA GCCCACCTCAACGCCGACTCCCTCATGATCAATCTAGCGGGGAGCTGCTTCATGGGACAC ATCGGCGGTACACTGCGTTCTGAATCGGAGAACACCGACATCCACGTCGGCCACCCCGCT TCCCTCATGTTCATGTTCCCCGCCGACTAG
  • Download Fasta

  • Fasta :-

    MTVKTASEMSLLPYGEHQGSFRGVVACSNRDDGYFSGENNYVGTSIYTGFRYQCVEYARR FLLLTTGCVFANCGRASEIYAMDYITHVETGALYTLHHHNNDGTATQKPAPGDIIIYPYH PELTPWGHVGVISFVDDNRVGIAEQNHYFGAFTSPNESYLDGERCVARYTTLTFDEATKT WRIEEPGSMPSAVGWLSYPDAPTREQIHSPFTPLPCAIKVRSTPFHQDDHPFLTHYHLYD GFEIPSGCVRHAYGMRNGTAETLVGATSAAARVLRFTLHLLFHRGRLGPAFRALPTNPLN ATLPEGAGAGTEVCREVDALFKVLAEEDVVNATETTPDVLRKAVATYFNIPLEWVMAMER DFAKGETHMAAVVSFYPNIVTDSAALETFRATRKNAGTEAAPAAGTVPQTTANASTPVAE EPLTVSYPGTVEEFPVKNPHDEAWCLAKVNFGSARVMTELSQLSKVTKELTERISLMTPS MRSFISTQYRMDFAGYLKVVEAVYGPRTGFTIVVSDDQPMDDLLRELVMTVQNLCELVEY PVRVVNEKDLTFVNGMLHATPSAASPEAGSQTTNIAPSEAYDVDFVYALCEWPRILTCKE ATHAALYRAAVDPTSDVVFAKPLWSHLCSGAMNVSDDAERAHHTHSPRSTSVRFFDVCRR LYLLASPKQQPTTWDLEVSEYKDSCRRIHVNAETVPMHSPAHLNADSLMINLAGSCFMGH IGGTLRSESENTDIHVGHPASLMFMFPAD

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.36.4300597 TPRILTCKEA0.994unspLmxM.36.4300597 TPRILTCKEA0.994unspLmxM.36.4300597 TPRILTCKEA0.994unspLmxM.36.4300646 SHHTHSPRST0.996unspLmxM.36.4300651 SPRSTSVRFF0.996unspLmxM.36.4300158 SSPNESYLDG0.997unspLmxM.36.4300565 SPSAASPEAG0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India