LmxM.36.6750 | prolyl endopeptidase

_IDPredictionOTHERSPmTPCS_Position
LmxM.36.6750OTHER0.8279940.0409060.131100
No Results

  • Fasta :-

    >LmxM.36.6750 MKSLYPFVCRAATTYQLHGRTIPEPYDYLEDPGNAETKEFVQKQNETFEAYMESSIEVRD KIVERVTEMLNYARTSNPSLHAGKYYYQFNTGLQNQSVLMRTTSLKDDNPTVFLDPNMLS ADGTTALKTYAWSENEELFAYSLSEKGSDWQYIQVLNAETGEQLPDRLNWAKFSGISWWR NDGFFYQRYPELSEDVDKGAETDSAQNQYVCFHKVGTAQSEDLVILQVPEQPQWILAAEV TVDHQYLVVRVMKGSDPNNLIWIAKLPTTCEELNRPLEFMKVVNTFVGQYNYLGNEGETF YMASTKDASRKKIISLKLDTAEEKDVVAEQESVLNLAVLVKDTLIIVYLEDVKDVMYYRK LHGAAAMKKVDLPLGTITSLFSDYKKDFVSFKVSSFMLPGRSYVMNINDPQGSLTVYKDD VVSGLNVEDYVTVQHFYKSADGTKIPMFIVHKKGSLSSHSPVMLYGYGGFGISLTPTFSP SRIVFLQNLGGVLAIPNIRGGNEYGQSWHDAGRLTRKQNCFTDFIAAAKYLHSNNIGSPA TTAIMGGSNGGLLVAACANQAPDAFACVVCQVGVLDMFKFHKFTIGHAWISDYGNPDEEK DFKVLEKYSPIHNVRTGVKYPAILVVTGDHDDRVVPLHSLKYVATLQHANPELGGPFLAR VEVAAGHGFGKPTSKVIAETSDIYAFMAKNTGAVWHA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/683 Sequence name : 683 Sequence length : 697 VALUES OF COMPUTED PARAMETERS Coef20 : 4.135 CoefTot : -0.669 ChDiff : -16 ZoneTo : 23 KR : 3 DE : 0 CleavSite : 30 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.618 1.982 0.259 0.609 MesoH : 0.207 0.569 -0.177 0.330 MuHd_075 : 34.560 24.434 7.659 8.425 MuHd_095 : 23.020 16.796 6.766 6.159 MuHd_100 : 21.507 13.625 4.288 6.671 MuHd_105 : 25.226 15.278 5.789 7.168 Hmax_075 : 16.200 15.700 2.843 5.320 Hmax_095 : 12.200 12.300 1.715 4.550 Hmax_100 : 8.500 10.900 1.614 4.660 Hmax_105 : 11.200 13.183 4.129 3.860 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3021 0.6979 DFMC : 0.5079 0.4921
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 697 LmxM.36.6750 MKSLYPFVCRAATTYQLHGRTIPEPYDYLEDPGNAETKEFVQKQNETFEAYMESSIEVRDKIVERVTEMLNYARTSNPSL 80 HAGKYYYQFNTGLQNQSVLMRTTSLKDDNPTVFLDPNMLSADGTTALKTYAWSENEELFAYSLSEKGSDWQYIQVLNAET 160 GEQLPDRLNWAKFSGISWWRNDGFFYQRYPELSEDVDKGAETDSAQNQYVCFHKVGTAQSEDLVILQVPEQPQWILAAEV 240 TVDHQYLVVRVMKGSDPNNLIWIAKLPTTCEELNRPLEFMKVVNTFVGQYNYLGNEGETFYMASTKDASRKKIISLKLDT 320 AEEKDVVAEQESVLNLAVLVKDTLIIVYLEDVKDVMYYRKLHGAAAMKKVDLPLGTITSLFSDYKKDFVSFKVSSFMLPG 400 RSYVMNINDPQGSLTVYKDDVVSGLNVEDYVTVQHFYKSADGTKIPMFIVHKKGSLSSHSPVMLYGYGGFGISLTPTFSP 480 SRIVFLQNLGGVLAIPNIRGGNEYGQSWHDAGRLTRKQNCFTDFIAAAKYLHSNNIGSPATTAIMGGSNGGLLVAACANQ 560 APDAFACVVCQVGVLDMFKFHKFTIGHAWISDYGNPDEEKDFKVLEKYSPIHNVRTGVKYPAILVVTGDHDDRVVPLHSL 640 KYVATLQHANPELGGPFLARVEVAAGHGFGKPTSKVIAETSDIYAFMAKNTGAVWHA 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ......................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LmxM.36.6750 2 -----MK|SL 0.085 . LmxM.36.6750 10 LYPFVCR|AA 0.116 . LmxM.36.6750 20 TYQLHGR|TI 0.095 . LmxM.36.6750 38 PGNAETK|EF 0.074 . LmxM.36.6750 43 TKEFVQK|QN 0.091 . LmxM.36.6750 59 ESSIEVR|DK 0.141 . LmxM.36.6750 61 SIEVRDK|IV 0.116 . LmxM.36.6750 65 RDKIVER|VT 0.091 . LmxM.36.6750 74 EMLNYAR|TS 0.091 . LmxM.36.6750 84 PSLHAGK|YY 0.076 . LmxM.36.6750 101 NQSVLMR|TT 0.122 . LmxM.36.6750 106 MRTTSLK|DD 0.073 . LmxM.36.6750 128 DGTTALK|TY 0.056 . LmxM.36.6750 146 AYSLSEK|GS 0.082 . LmxM.36.6750 167 GEQLPDR|LN 0.107 . LmxM.36.6750 172 DRLNWAK|FS 0.084 . LmxM.36.6750 180 SGISWWR|ND 0.079 . LmxM.36.6750 188 DGFFYQR|YP 0.087 . LmxM.36.6750 198 LSEDVDK|GA 0.079 . LmxM.36.6750 214 QYVCFHK|VG 0.064 . LmxM.36.6750 250 HQYLVVR|VM 0.084 . LmxM.36.6750 253 LVVRVMK|GS 0.167 . LmxM.36.6750 265 NLIWIAK|LP 0.066 . LmxM.36.6750 275 TCEELNR|PL 0.089 . LmxM.36.6750 281 RPLEFMK|VV 0.080 . LmxM.36.6750 306 FYMASTK|DA 0.091 . LmxM.36.6750 310 STKDASR|KK 0.080 . LmxM.36.6750 311 TKDASRK|KI 0.093 . LmxM.36.6750 312 KDASRKK|II 0.159 . LmxM.36.6750 317 KKIISLK|LD 0.072 . LmxM.36.6750 324 LDTAEEK|DV 0.089 . LmxM.36.6750 341 NLAVLVK|DT 0.072 . LmxM.36.6750 353 VYLEDVK|DV 0.066 . LmxM.36.6750 359 KDVMYYR|KL 0.102 . LmxM.36.6750 360 DVMYYRK|LH 0.088 . LmxM.36.6750 368 HGAAAMK|KV 0.082 . LmxM.36.6750 369 GAAAMKK|VD 0.087 . LmxM.36.6750 385 SLFSDYK|KD 0.063 . LmxM.36.6750 386 LFSDYKK|DF 0.107 . LmxM.36.6750 392 KDFVSFK|VS 0.073 . LmxM.36.6750 401 SFMLPGR|SY 0.126 . LmxM.36.6750 418 GSLTVYK|DD 0.072 . LmxM.36.6750 438 TVQHFYK|SA 0.119 . LmxM.36.6750 444 KSADGTK|IP 0.062 . LmxM.36.6750 452 PMFIVHK|KG 0.060 . LmxM.36.6750 453 MFIVHKK|GS 0.106 . LmxM.36.6750 482 PTFSPSR|IV 0.091 . LmxM.36.6750 499 LAIPNIR|GG 0.086 . LmxM.36.6750 513 SWHDAGR|LT 0.109 . LmxM.36.6750 516 DAGRLTR|KQ 0.166 . LmxM.36.6750 517 AGRLTRK|QN 0.078 . LmxM.36.6750 529 DFIAAAK|YL 0.069 . LmxM.36.6750 579 GVLDMFK|FH 0.058 . LmxM.36.6750 582 DMFKFHK|FT 0.074 . LmxM.36.6750 600 GNPDEEK|DF 0.069 . LmxM.36.6750 603 DEEKDFK|VL 0.064 . LmxM.36.6750 607 DFKVLEK|YS 0.062 . LmxM.36.6750 615 SPIHNVR|TG 0.086 . LmxM.36.6750 619 NVRTGVK|YP 0.061 . LmxM.36.6750 633 TGDHDDR|VV 0.073 . LmxM.36.6750 641 VPLHSLK|YV 0.083 . LmxM.36.6750 660 GGPFLAR|VE 0.107 . LmxM.36.6750 671 AGHGFGK|PT 0.089 . LmxM.36.6750 675 FGKPTSK|VI 0.059 . LmxM.36.6750 689 IYAFMAK|NT 0.091 . ____________________________^_________________

  • Fasta :-

    >LmxM.36.6750 ATGAAGTCCCTCTACCCCTTCGTCTGCCGTGCGGCTACGACCTACCAGCTGCACGGCCGC ACAATCCCCGAGCCGTACGACTACCTCGAGGACCCAGGCAATGCCGAGACGAAGGAGTTC GTGCAGAAGCAAAACGAGACATTTGAGGCATATATGGAGTCTTCCATCGAGGTCCGAGAC AAGATAGTGGAACGGGTGACGGAGATGCTCAACTACGCGCGTACAAGTAACCCGAGTCTG CACGCTGGCAAGTACTACTACCAATTCAACACCGGCCTGCAAAACCAGAGCGTCCTCATG AGGACTACGTCTCTCAAGGACGACAATCCGACTGTCTTTCTGGACCCAAACATGCTCAGT GCCGACGGCACCACTGCTCTCAAGACTTACGCTTGGAGCGAGAACGAGGAGTTGTTTGCC TACAGCCTGAGCGAAAAGGGAAGCGACTGGCAGTACATCCAGGTGCTCAACGCGGAGACG GGGGAACAACTTCCCGACAGGCTGAACTGGGCGAAGTTCTCGGGCATCTCGTGGTGGAGA AATGATGGCTTTTTCTACCAGCGCTATCCCGAGCTCAGCGAGGACGTCGACAAGGGCGCC GAGACGGACTCGGCGCAGAATCAGTACGTGTGCTTCCACAAGGTCGGGACTGCGCAGTCG GAGGATCTGGTCATTCTGCAGGTGCCCGAGCAGCCCCAGTGGATCTTGGCGGCCGAGGTG ACGGTCGACCACCAGTACCTCGTCGTCCGCGTCATGAAAGGGAGTGATCCGAACAACCTT ATTTGGATTGCGAAGCTGCCGACCACCTGCGAGGAGCTGAACAGGCCGCTGGAGTTCATG AAGGTGGTGAACACGTTCGTCGGTCAGTACAATTACCTCGGCAACGAGGGCGAGACGTTT TACATGGCGAGTACCAAGGATGCTTCGCGGAAAAAGATTATTTCCCTTAAGCTTGACACC GCCGAGGAAAAGGATGTCGTCGCTGAGCAGGAGTCCGTACTGAACCTTGCCGTGCTTGTG AAGGACACACTGATCATTGTGTACCTCGAGGACGTCAAGGACGTGATGTACTACCGCAAG CTGCACGGGGCAGCGGCGATGAAGAAAGTTGACCTGCCGCTCGGCACCATCACGTCCTTA TTTTCTGACTATAAGAAGGACTTTGTCTCCTTCAAGGTCTCCTCGTTCATGTTGCCCGGC CGCTCCTATGTCATGAACATCAACGATCCGCAGGGCTCGCTGACCGTCTACAAGGACGAC GTAGTGAGCGGCCTCAACGTTGAAGACTACGTCACGGTGCAGCACTTTTACAAATCTGCT GATGGTACGAAGATTCCGATGTTCATTGTGCACAAGAAGGGGTCCTTGTCCTCCCACTCA CCGGTCATGCTGTACGGCTACGGTGGTTTCGGCATTTCGCTGACCCCCACCTTTAGCCCG TCGCGTATTGTCTTTCTGCAGAACCTCGGCGGCGTTCTCGCCATCCCGAACATTCGCGGC GGCAACGAGTACGGCCAGTCGTGGCACGACGCCGGGCGCCTTACGAGGAAGCAAAACTGT TTCACCGATTTCATCGCCGCCGCCAAATACCTCCACAGCAACAACATTGGTTCCCCTGCC ACGACGGCCATCATGGGCGGCTCCAACGGCGGCCTCCTCGTCGCCGCCTGCGCCAATCAG GCTCCTGACGCGTTTGCGTGCGTCGTGTGCCAAGTAGGCGTCCTTGACATGTTCAAGTTT CACAAGTTCACCATCGGCCATGCTTGGATCTCCGACTACGGCAACCCGGATGAGGAGAAG GACTTCAAAGTATTGGAGAAGTACAGCCCCATCCACAATGTGCGCACCGGCGTCAAGTAC CCGGCCATCCTCGTGGTAACCGGTGACCACGATGATCGTGTGGTGCCGCTGCATTCGCTC AAGTACGTTGCCACGCTGCAGCACGCGAACCCGGAGCTGGGTGGACCCTTCCTGGCGCGT GTTGAGGTGGCTGCAGGTCACGGCTTTGGCAAGCCCACCAGCAAGGTCATCGCCGAGACG TCCGACATATATGCCTTTATGGCGAAGAACACTGGTGCAGTGTGGCACGCCTGA
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  • Fasta :-

    MKSLYPFVCRAATTYQLHGRTIPEPYDYLEDPGNAETKEFVQKQNETFEAYMESSIEVRD KIVERVTEMLNYARTSNPSLHAGKYYYQFNTGLQNQSVLMRTTSLKDDNPTVFLDPNMLS ADGTTALKTYAWSENEELFAYSLSEKGSDWQYIQVLNAETGEQLPDRLNWAKFSGISWWR NDGFFYQRYPELSEDVDKGAETDSAQNQYVCFHKVGTAQSEDLVILQVPEQPQWILAAEV TVDHQYLVVRVMKGSDPNNLIWIAKLPTTCEELNRPLEFMKVVNTFVGQYNYLGNEGETF YMASTKDASRKKIISLKLDTAEEKDVVAEQESVLNLAVLVKDTLIIVYLEDVKDVMYYRK LHGAAAMKKVDLPLGTITSLFSDYKKDFVSFKVSSFMLPGRSYVMNINDPQGSLTVYKDD VVSGLNVEDYVTVQHFYKSADGTKIPMFIVHKKGSLSSHSPVMLYGYGGFGISLTPTFSP SRIVFLQNLGGVLAIPNIRGGNEYGQSWHDAGRLTRKQNCFTDFIAAAKYLHSNNIGSPA TTAIMGGSNGGLLVAACANQAPDAFACVVCQVGVLDMFKFHKFTIGHAWISDYGNPDEEK DFKVLEKYSPIHNVRTGVKYPAILVVTGDHDDRVVPLHSLKYVATLQHANPELGGPFLAR VEVAAGHGFGKPTSKVIAETSDIYAFMAKNTGAVWHA

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
LmxM.36.6750104 SMRTTSLKDD0.996unspLmxM.36.6750309 STKDASRKKI0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India