NCLIV_000930 | 3-hydroxyisobutyryl-CoA hydrolase/ catalytic

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003860      

  • Computed_GO_Functions:  3-hydroxyisobutyryl-CoA hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_000930OTHER0.9998910.0000670.000042
No Results

  • Fasta :-

    >NCLIV_000930 MRSSAKYEAIEDPTRTWAHADGGGDLSQEVLERSNVGMGTCILNNPSGVLNMKGLCGLFR KLRDLEVNPLKRFVILTSRHSHLFNTGFDLKELLFLAELTQMSEKTIPLVALWQLRNLCD VAYLVHNYTKPLIVLMNGSTAGSGAALCCLANRSAAYHSSSFTCDPTAYGWIPDCGMSFV LANLRGSLGVFLALTGHTLSGPDLIWSGLCKHWMSPEALPFLELTAEKQLEVSEREAAVL LEEHFLDAPDSYSLDDWEEVIHEHFGAPTSPRRSLLFRFIVASPPGALFTLASGVVAEVR ARLKATASRQSASVEGQMHAAWARAVLDRLAQRSPLAADVTFALIRSVQQLKKHIIQDAG IFRSEWHNSKLVLLAPVAASDTVSQTLRDWIDMRKAMSVRNAASAYAWGIGVVRLSLEQI LEAVEDRLVQEALQLELRAALRLLAVSSEFCG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_000930.fa Sequence name : NCLIV_000930 Sequence length : 452 VALUES OF COMPUTED PARAMETERS Coef20 : 3.993 CoefTot : 0.230 ChDiff : -5 ZoneTo : 7 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.771 1.565 0.333 0.638 MesoH : 0.529 0.647 -0.022 0.340 MuHd_075 : 32.357 17.684 9.162 5.270 MuHd_095 : 15.832 8.222 2.392 3.063 MuHd_100 : 18.719 5.312 3.563 3.169 MuHd_105 : 32.679 8.159 6.295 5.862 Hmax_075 : 11.317 9.800 1.832 3.535 Hmax_095 : -6.913 -0.788 -4.137 0.980 Hmax_100 : -0.500 -0.800 -1.911 2.120 Hmax_105 : 7.817 -0.000 -0.713 2.753 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5836 0.4164 DFMC : 0.6053 0.3947
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 452 NCLIV_000930 MRSSAKYEAIEDPTRTWAHADGGGDLSQEVLERSNVGMGTCILNNPSGVLNMKGLCGLFRKLRDLEVNPLKRFVILTSRH 80 SHLFNTGFDLKELLFLAELTQMSEKTIPLVALWQLRNLCDVAYLVHNYTKPLIVLMNGSTAGSGAALCCLANRSAAYHSS 160 SFTCDPTAYGWIPDCGMSFVLANLRGSLGVFLALTGHTLSGPDLIWSGLCKHWMSPEALPFLELTAEKQLEVSEREAAVL 240 LEEHFLDAPDSYSLDDWEEVIHEHFGAPTSPRRSLLFRFIVASPPGALFTLASGVVAEVRARLKATASRQSASVEGQMHA 320 AWARAVLDRLAQRSPLAADVTFALIRSVQQLKKHIIQDAGIFRSEWHNSKLVLLAPVAASDTVSQTLRDWIDMRKAMSVR 400 NAASAYAWGIGVVRLSLEQILEAVEDRLVQEALQLELRAALRLLAVSSEFCG 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_000930 2 -----MR|SS 0.190 . NCLIV_000930 6 -MRSSAK|YE 0.072 . NCLIV_000930 15 AIEDPTR|TW 0.086 . NCLIV_000930 33 SQEVLER|SN 0.138 . NCLIV_000930 53 SGVLNMK|GL 0.068 . NCLIV_000930 60 GLCGLFR|KL 0.108 . NCLIV_000930 61 LCGLFRK|LR 0.072 . NCLIV_000930 63 GLFRKLR|DL 0.348 . NCLIV_000930 71 LEVNPLK|RF 0.054 . NCLIV_000930 72 EVNPLKR|FV 0.217 . NCLIV_000930 79 FVILTSR|HS 0.073 . NCLIV_000930 91 NTGFDLK|EL 0.053 . NCLIV_000930 105 LTQMSEK|TI 0.062 . NCLIV_000930 116 VALWQLR|NL 0.090 . NCLIV_000930 130 LVHNYTK|PL 0.071 . NCLIV_000930 153 LCCLANR|SA 0.114 . NCLIV_000930 185 FVLANLR|GS 0.071 . NCLIV_000930 211 IWSGLCK|HW 0.073 . NCLIV_000930 228 LELTAEK|QL 0.068 . NCLIV_000930 235 QLEVSER|EA 0.117 . NCLIV_000930 272 GAPTSPR|RS 0.078 . NCLIV_000930 273 APTSPRR|SL 0.139 . NCLIV_000930 278 RRSLLFR|FI 0.203 . NCLIV_000930 300 GVVAEVR|AR 0.081 . NCLIV_000930 302 VAEVRAR|LK 0.083 . NCLIV_000930 304 EVRARLK|AT 0.061 . NCLIV_000930 309 LKATASR|QS 0.119 . NCLIV_000930 324 MHAAWAR|AV 0.177 . NCLIV_000930 329 ARAVLDR|LA 0.129 . NCLIV_000930 333 LDRLAQR|SP 0.119 . NCLIV_000930 346 VTFALIR|SV 0.157 . NCLIV_000930 352 RSVQQLK|KH 0.062 . NCLIV_000930 353 SVQQLKK|HI 0.112 . NCLIV_000930 363 QDAGIFR|SE 0.108 . NCLIV_000930 370 SEWHNSK|LV 0.066 . NCLIV_000930 388 TVSQTLR|DW 0.183 . NCLIV_000930 394 RDWIDMR|KA 0.112 . NCLIV_000930 395 DWIDMRK|AM 0.075 . NCLIV_000930 400 RKAMSVR|NA 0.120 . NCLIV_000930 414 WGIGVVR|LS 0.074 . NCLIV_000930 427 LEAVEDR|LV 0.127 . NCLIV_000930 438 ALQLELR|AA 0.084 . NCLIV_000930 442 ELRAALR|LL 0.072 . ____________________________^_________________

  • Fasta :-

    >NCLIV_000930 ATGCGTTCAAGTGCAAAATACGAAGCTATAGAAGACCCCACTCGTACATGGGCGCACGCA GATGGCGGCGGCGACCTGTCGCAAGAAGTTCTCGAGAGGAGCAACGTGGGGATGGGGACG TGCATCTTGAACAACCCTTCGGGTGTTTTGAACATGAAAGGCCTCTGCGGTCTCTTCCGC AAACTTCGGGACCTCGAAGTGAACCCTCTGAAGCGTTTTGTGATCCTCACCTCCCGTCAC AGCCACCTCTTCAACACAGGCTTCGATCTCAAGGAGCTTCTCTTCTTGGCGGAGCTAACG CAGATGTCCGAGAAAACGATTCCTCTCGTGGCGCTCTGGCAACTGCGAAATCTGTGCGAC GTTGCTTACCTCGTGCACAACTATACCAAACCCCTGATTGTTCTCATGAACGGCTCCACA GCTGGCAGCGGAGCGGCGCTTTGTTGTCTGGCGAACCGGAGCGCGGCGTATCATTCCTCA TCCTTCACGTGCGACCCTACAGCGTACGGGTGGATTCCGGACTGCGGCATGTCGTTCGTC CTCGCGAACCTGCGAGGCTCTCTCGGCGTCTTCCTCGCGTTGACGGGTCACACACTGTCT GGTCCAGATCTAATATGGTCAGGTCTCTGCAAGCACTGGATGTCGCCCGAAGCGCTACCC TTCCTCGAACTCACTGCCGAGAAACAGCTGGAGGTGTCCGAGCGCGAAGCTGCTGTGCTC CTCGAGGAGCATTTCCTCGACGCACCTGACTCGTACTCTCTCGACGACTGGGAGGAAGTT ATCCACGAACACTTCGGTGCCCCGACATCTCCGCGCCGGTCGCTCCTGTTTCGTTTTATT GTCGCTTCTCCGCCCGGGGCCCTTTTCACGCTCGCCTCCGGCGTGGTTGCGGAAGTCCGG GCCCGCCTCAAGGCGACGGCGTCCCGGCAAAGCGCGAGCGTGGAGGGACAGATGCATGCA GCTTGGGCGCGGGCCGTCCTCGACCGCCTCGCTCAGCGATCACCTTTGGCGGCAGACGTC ACCTTCGCGCTTATCCGGTCGGTGCAACAACTGAAGAAACACATTATTCAGGATGCAGGA ATTTTCCGTAGCGAGTGGCACAACTCCAAACTCGTCTTGTTGGCGCCCGTCGCAGCTTCT GACACTGTCTCTCAAACGCTACGTGACTGGATTGACATGCGCAAAGCTATGTCGGTTCGA AACGCTGCATCTGCATACGCATGGGGTATTGGAGTCGTGCGCCTTAGCTTGGAGCAAATT CTCGAAGCGGTTGAAGACCGCTTGGTGCAGGAAGCTCTTCAGCTGGAGCTTCGCGCTGCC CTTCGTCTCCTCGCGGTGAGTTCTGAGTTCTGTGGCTGA
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  • Fasta :-

    MRSSAKYEAIEDPTRTWAHADGGGDLSQEVLERSNVGMGTCILNNPSGVLNMKGLCGLFR KLRDLEVNPLKRFVILTSRHSHLFNTGFDLKELLFLAELTQMSEKTIPLVALWQLRNLCD VAYLVHNYTKPLIVLMNGSTAGSGAALCCLANRSAAYHSSSFTCDPTAYGWIPDCGMSFV LANLRGSLGVFLALTGHTLSGPDLIWSGLCKHWMSPEALPFLELTAEKQLEVSEREAAVL LEEHFLDAPDSYSLDDWEEVIHEHFGAPTSPRRSLLFRFIVASPPGALFTLASGVVAEVR ARLKATASRQSASVEGQMHAAWARAVLDRLAQRSPLAADVTFALIRSVQQLKKHIIQDAG IFRSEWHNSKLVLLAPVAASDTVSQTLRDWIDMRKAMSVRNAASAYAWGIGVVRLSLEQI LEAVEDRLVQEALQLELRAALRLLAVSSEFCG

    No Results
  • title: substrate binding site
  • coordinates: V49,S81,T86,G87,F88,D89,L90,S139,A141,G142,S143,D165,P166,Y169
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_000930398 SRKAMSVRNA0.995unspNCLIV_000930398 SRKAMSVRNA0.995unspNCLIV_000930398 SRKAMSVRNA0.995unspNCLIV_000930416 SVVRLSLEQI0.992unspNCLIV_000930233 SQLEVSEREA0.996unspNCLIV_000930270 SGAPTSPRRS0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India