NCLIV_001540 | putative PH domain-containing protein

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  • Computed_GO_Function_IDs:        

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  • Computed_GO_Process_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_001540OTHER0.9999660.0000070.000027
No Results

  • Fasta :-

    >NCLIV_001540 MGETDSDEEAEGEVLEFCGESFDSRDDLLMGDESEELLDGEPSVRAVEDEDSSPETAATE TVLSPEDALFEGGVHPRRRTASDDSVAALQEFTFLYQAALRKRGISCCGYLKKRSPNRLV GWQRRWFVLKDKRLLYYRQPEDRTPAGRIDLELVKIKIQCLWNPRQFHGGLLCRSGSMLE PLTPGYSAATGWMELLCCGSGPKGSQLLVAANDLQEEVRFRLKPVGCTRVFELAGPYVEV VNWIDKLRQVVKSCHVSRHYVRRVAQQRGFWKVERISPDKFEEIVDTGDIILFRTKKFPA QLQRAVTRGHYDHVGMMLRNQDKDIFILESMGDTGVIITSWKTFVKAKWYTAYRKVVLRR LRWSRQPESLSRLLAFLQKVVGRNYELTFSKLFATGVAPDKPDKGYFCSELVAAALKEIG ALPEDTKCARYWPHTFAAGSALKLSEGFELDEELLVDFCLRSKARKRHGPKKLEGRTVPL PKPPLQEELTDTDRVPLPPDTGRLNSFLGCASAVGETEAPLEETPSRVNEAELHIGEEMQ VV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_001540.fa Sequence name : NCLIV_001540 Sequence length : 542 VALUES OF COMPUTED PARAMETERS Coef20 : 2.370 CoefTot : -0.250 ChDiff : -5 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.988 1.129 0.138 0.548 MesoH : -0.473 0.222 -0.299 0.187 MuHd_075 : 16.570 11.728 4.345 1.928 MuHd_095 : 14.865 11.911 5.940 2.447 MuHd_100 : 11.833 11.370 4.865 1.751 MuHd_105 : 15.297 12.961 4.996 2.384 Hmax_075 : 2.100 8.633 -0.788 2.777 Hmax_095 : -4.287 2.713 -1.298 1.776 Hmax_100 : -6.000 3.500 -1.643 1.740 Hmax_105 : -4.500 3.700 -1.607 1.540 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9887 0.0113 DFMC : 0.9868 0.0132
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 542 NCLIV_001540 MGETDSDEEAEGEVLEFCGESFDSRDDLLMGDESEELLDGEPSVRAVEDEDSSPETAATETVLSPEDALFEGGVHPRRRT 80 ASDDSVAALQEFTFLYQAALRKRGISCCGYLKKRSPNRLVGWQRRWFVLKDKRLLYYRQPEDRTPAGRIDLELVKIKIQC 160 LWNPRQFHGGLLCRSGSMLEPLTPGYSAATGWMELLCCGSGPKGSQLLVAANDLQEEVRFRLKPVGCTRVFELAGPYVEV 240 VNWIDKLRQVVKSCHVSRHYVRRVAQQRGFWKVERISPDKFEEIVDTGDIILFRTKKFPAQLQRAVTRGHYDHVGMMLRN 320 QDKDIFILESMGDTGVIITSWKTFVKAKWYTAYRKVVLRRLRWSRQPESLSRLLAFLQKVVGRNYELTFSKLFATGVAPD 400 KPDKGYFCSELVAAALKEIGALPEDTKCARYWPHTFAAGSALKLSEGFELDEELLVDFCLRSKARKRHGPKKLEGRTVPL 480 PKPPLQEELTDTDRVPLPPDTGRLNSFLGCASAVGETEAPLEETPSRVNEAELHIGEEMQVV 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .............................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_001540 25 GESFDSR|DD 0.111 . NCLIV_001540 45 DGEPSVR|AV 0.138 . NCLIV_001540 77 EGGVHPR|RR 0.096 . NCLIV_001540 78 GGVHPRR|RT 0.096 . NCLIV_001540 79 GVHPRRR|TA 0.225 . NCLIV_001540 101 LYQAALR|KR 0.080 . NCLIV_001540 102 YQAALRK|RG 0.067 . NCLIV_001540 103 QAALRKR|GI 0.261 . NCLIV_001540 112 SCCGYLK|KR 0.058 . NCLIV_001540 113 CCGYLKK|RS 0.084 . NCLIV_001540 114 CGYLKKR|SP 0.212 . NCLIV_001540 118 KKRSPNR|LV 0.242 . NCLIV_001540 124 RLVGWQR|RW 0.080 . NCLIV_001540 125 LVGWQRR|WF 0.119 . NCLIV_001540 130 RRWFVLK|DK 0.071 . NCLIV_001540 132 WFVLKDK|RL 0.059 . NCLIV_001540 133 FVLKDKR|LL 0.106 . NCLIV_001540 138 KRLLYYR|QP 0.093 . NCLIV_001540 143 YRQPEDR|TP 0.085 . NCLIV_001540 148 DRTPAGR|ID 0.076 . NCLIV_001540 155 IDLELVK|IK 0.059 . NCLIV_001540 157 LELVKIK|IQ 0.059 . NCLIV_001540 165 QCLWNPR|QF 0.095 . NCLIV_001540 174 HGGLLCR|SG 0.136 . NCLIV_001540 203 CCGSGPK|GS 0.056 . NCLIV_001540 219 DLQEEVR|FR 0.080 . NCLIV_001540 221 QEEVRFR|LK 0.078 . NCLIV_001540 223 EVRFRLK|PV 0.079 . NCLIV_001540 229 KPVGCTR|VF 0.095 . NCLIV_001540 246 VVNWIDK|LR 0.058 . NCLIV_001540 248 NWIDKLR|QV 0.135 . NCLIV_001540 252 KLRQVVK|SC 0.108 . NCLIV_001540 258 KSCHVSR|HY 0.104 . NCLIV_001540 262 VSRHYVR|RV 0.154 . NCLIV_001540 263 SRHYVRR|VA 0.364 . NCLIV_001540 268 RRVAQQR|GF 0.172 . NCLIV_001540 272 QQRGFWK|VE 0.065 . NCLIV_001540 275 GFWKVER|IS 0.097 . NCLIV_001540 280 ERISPDK|FE 0.071 . NCLIV_001540 294 GDIILFR|TK 0.066 . NCLIV_001540 296 IILFRTK|KF 0.060 . NCLIV_001540 297 ILFRTKK|FP 0.308 . NCLIV_001540 304 FPAQLQR|AV 0.166 . NCLIV_001540 308 LQRAVTR|GH 0.143 . NCLIV_001540 319 HVGMMLR|NQ 0.083 . NCLIV_001540 323 MLRNQDK|DI 0.103 . NCLIV_001540 342 VIITSWK|TF 0.060 . NCLIV_001540 346 SWKTFVK|AK 0.061 . NCLIV_001540 348 KTFVKAK|WY 0.087 . NCLIV_001540 354 KWYTAYR|KV 0.081 . NCLIV_001540 355 WYTAYRK|VV 0.084 . NCLIV_001540 359 YRKVVLR|RL 0.105 . NCLIV_001540 360 RKVVLRR|LR 0.124 . NCLIV_001540 362 VVLRRLR|WS 0.186 . NCLIV_001540 365 RRLRWSR|QP 0.191 . NCLIV_001540 372 QPESLSR|LL 0.076 . NCLIV_001540 379 LLAFLQK|VV 0.078 . NCLIV_001540 383 LQKVVGR|NY 0.099 . NCLIV_001540 391 YELTFSK|LF 0.058 . NCLIV_001540 401 TGVAPDK|PD 0.064 . NCLIV_001540 404 APDKPDK|GY 0.071 . NCLIV_001540 417 LVAAALK|EI 0.071 . NCLIV_001540 427 ALPEDTK|CA 0.069 . NCLIV_001540 430 EDTKCAR|YW 0.096 . NCLIV_001540 443 AAGSALK|LS 0.062 . NCLIV_001540 461 LVDFCLR|SK 0.119 . NCLIV_001540 463 DFCLRSK|AR 0.056 . NCLIV_001540 465 CLRSKAR|KR 0.093 . NCLIV_001540 466 LRSKARK|RH 0.127 . NCLIV_001540 467 RSKARKR|HG 0.216 . NCLIV_001540 471 RKRHGPK|KL 0.071 . NCLIV_001540 472 KRHGPKK|LE 0.142 . NCLIV_001540 476 PKKLEGR|TV 0.087 . NCLIV_001540 482 RTVPLPK|PP 0.068 . NCLIV_001540 494 ELTDTDR|VP 0.061 . NCLIV_001540 503 LPPDTGR|LN 0.090 . NCLIV_001540 527 LEETPSR|VN 0.112 . ____________________________^_________________

  • Fasta :-

    >NCLIV_001540 ATGGGAGAGACTGACAGCGACGAGGAAGCAGAAGGCGAAGTCCTTGAGTTCTGTGGCGAG AGCTTCGACTCACGAGACGACCTGCTCATGGGTGACGAATCTGAAGAGCTGTTGGACGGA GAGCCCAGTGTGCGTGCCGTCGAAGACGAGGATAGCAGTCCAGAGACGGCTGCGACCGAG ACAGTCTTATCCCCGGAAGATGCACTGTTCGAAGGTGGGGTGCATCCGCGGAGAAGAACT GCATCCGACGACTCGGTCGCTGCGTTGCAAGAGTTCACTTTCCTCTACCAGGCTGCTCTC AGGAAAAGAGGGATTTCGTGTTGCGGCTATCTGAAGAAACGGAGCCCCAACCGGCTGGTG GGATGGCAGCGCCGCTGGTTCGTCCTGAAAGACAAGAGGTTGCTTTACTATCGACAGCCG GAAGACCGCACCCCCGCCGGGCGTATCGATCTGGAGCTCGTCAAAATCAAAATCCAGTGT CTCTGGAACCCCCGACAGTTCCACGGCGGTCTCCTGTGCCGGAGCGGCAGCATGCTGGAA CCTCTGACGCCGGGGTACTCTGCTGCAACCGGATGGATGGAGTTGCTTTGCTGCGGAAGT GGCCCGAAGGGCTCTCAGCTCCTGGTAGCCGCAAACGACTTACAGGAGGAAGTGCGATTT CGACTGAAGCCTGTTGGGTGCACGCGCGTGTTCGAACTCGCTGGTCCGTACGTGGAAGTC GTGAATTGGATCGACAAGCTGAGGCAAGTGGTGAAGAGCTGCCACGTGTCGCGACACTAT GTTCGCCGGGTGGCGCAGCAGCGGGGCTTCTGGAAGGTGGAGAGGATTTCTCCGGATAAG TTCGAGGAAATCGTCGATACAGGGGACATCATTTTGTTCAGAACCAAAAAGTTCCCCGCG CAGCTCCAGCGTGCAGTCACGCGCGGGCACTACGATCACGTCGGCATGATGCTCAGGAAT CAAGACAAGGATATCTTCATCCTCGAAAGCATGGGGGATACCGGAGTGATTATTACTTCG TGGAAGACTTTTGTCAAGGCCAAGTGGTACACAGCCTATCGCAAAGTGGTCCTGCGTCGC CTCCGGTGGTCCAGACAGCCAGAGAGCTTGTCTCGACTCCTCGCCTTTCTTCAGAAGGTT GTTGGCAGAAACTACGAACTCACGTTTTCGAAATTGTTCGCAACTGGCGTTGCACCTGAC AAACCAGACAAAGGTTATTTTTGCTCGGAGCTCGTCGCGGCGGCTCTCAAGGAGATTGGT GCACTGCCGGAGGACACTAAATGCGCACGCTACTGGCCACACACTTTCGCGGCAGGCAGC GCGCTGAAGTTGAGTGAAGGCTTCGAGTTAGATGAAGAACTTTTGGTCGACTTTTGTCTC CGGTCGAAGGCACGGAAACGCCATGGCCCGAAGAAACTGGAGGGGCGTACAGTCCCTCTT CCAAAACCTCCGTTGCAGGAGGAGCTGACTGACACTGACCGCGTGCCTTTGCCGCCCGAC ACTGGCAGACTGAACTCGTTCTTGGGCTGTGCGAGTGCTGTGGGGGAAACGGAGGCGCCG CTTGAAGAGACGCCGTCGCGCGTGAATGAGGCGGAACTGCACATAGGGGAGGAAATGCAA GTGGTTTGA
  • Download Fasta

  • Fasta :-

    MGETDSDEEAEGEVLEFCGESFDSRDDLLMGDESEELLDGEPSVRAVEDEDSSPETAATE TVLSPEDALFEGGVHPRRRTASDDSVAALQEFTFLYQAALRKRGISCCGYLKKRSPNRLV GWQRRWFVLKDKRLLYYRQPEDRTPAGRIDLELVKIKIQCLWNPRQFHGGLLCRSGSMLE PLTPGYSAATGWMELLCCGSGPKGSQLLVAANDLQEEVRFRLKPVGCTRVFELAGPYVEV VNWIDKLRQVVKSCHVSRHYVRRVAQQRGFWKVERISPDKFEEIVDTGDIILFRTKKFPA QLQRAVTRGHYDHVGMMLRNQDKDIFILESMGDTGVIITSWKTFVKAKWYTAYRKVVLRR LRWSRQPESLSRLLAFLQKVVGRNYELTFSKLFATGVAPDKPDKGYFCSELVAAALKEIG ALPEDTKCARYWPHTFAAGSALKLSEGFELDEELLVDFCLRSKARKRHGPKKLEGRTVPL PKPPLQEELTDTDRVPLPPDTGRLNSFLGCASAVGETEAPLEETPSRVNEAELHIGEEMQ VV

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_00154064 SETVLSPEDA0.998unspNCLIV_00154064 SETVLSPEDA0.998unspNCLIV_00154064 SETVLSPEDA0.998unspNCLIV_001540277 SVERISPDKF0.996unspNCLIV_0015406 SGETDSDEEA0.997unspNCLIV_00154053 SDEDSSPETA0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India