NCLIV_002180 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_002180OTHER0.9999860.0000100.000004
No Results

  • Fasta :-

    >NCLIV_002180 MIKRDMNPRADPCYEVEEYFCGGWKARTSLPADESSWTLSFDTLARDTREYLKTTLEARS CADMRAELRSRSQRGGDRIVKTNALHSERDPKVSLSSSHSSPSTVSGETRDRVDEWDVLA ACMYEACMDEEAIDARGATPLTDRMFGGSEAGYVSLDFLLDTDFEAEARELARGTAHPDA SPWMFSESRETVLVQRLQAIFHRLKDVLFWSAYVGPNELHPDQGQTLNLGSLKLGLSYHF YEEGHVDYQMYYKEHIANILQIFEAHLLKTHPELIQGAQLRNPNLRRSYSERAQRIFDFE KNDLRPLVLSPEETRKVTQYTHEITFGELKASTGALDVEALLHLYFDMLPQKGEQALSPC LDGKIAFTSSGVVVDDSLVLLIHEKDYFAKLETTLRSVDWAVLHDYLLYKVVRSDASLLS RDFRDEIKRYSKRVTKAEPLPRWRTCVSSVPQWILSRSYVLGRFDREKKKSVQQMVSTIR TAFKSLLEEYAWMDQSTRDEALEKLAGMKEKIGFPDWLLDDYETYFTRYYGDKSAALKLA DTHFEIQWRLGLEAIRSQLAEFGEPVDRNEWAMKPHSVNAYFSPSQNEIAFMAAVLQEPS LFVASPGASLGEETVVKALSYGAIAGVIAHEITHGFDDVGKEYDVNGRLRNWWTPESEAA FKAEATCMKDQYSGYSVVIAEVDDVAEAESRHASREVKEVNTDTNTRQKTVRVRGDLTLG ENIADNGGIQLAWAALKLELSPEQLASRPLENYGIPLTTAQLFTFSWGHFWCEIALDSFI RRQVETDPHCPARFRIQGPLANFHLFAEQEQCPVGSVMNPEKKCRVW
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_002180.fa Sequence name : NCLIV_002180 Sequence length : 827 VALUES OF COMPUTED PARAMETERS Coef20 : 3.217 CoefTot : 0.022 ChDiff : -29 ZoneTo : 4 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.359 1.576 0.090 0.558 MesoH : -0.204 0.384 -0.352 0.287 MuHd_075 : 29.553 17.234 4.987 7.335 MuHd_095 : 22.244 17.603 8.037 4.219 MuHd_100 : 29.382 22.022 9.864 5.034 MuHd_105 : 28.223 20.622 9.164 4.303 Hmax_075 : -8.662 0.350 -4.567 1.295 Hmax_095 : -13.300 3.062 -3.259 0.201 Hmax_100 : -7.600 6.900 -1.290 0.970 Hmax_105 : -1.633 8.167 0.506 1.225 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9231 0.0769 DFMC : 0.9152 0.0848
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 827 NCLIV_002180 MIKRDMNPRADPCYEVEEYFCGGWKARTSLPADESSWTLSFDTLARDTREYLKTTLEARSCADMRAELRSRSQRGGDRIV 80 KTNALHSERDPKVSLSSSHSSPSTVSGETRDRVDEWDVLAACMYEACMDEEAIDARGATPLTDRMFGGSEAGYVSLDFLL 160 DTDFEAEARELARGTAHPDASPWMFSESRETVLVQRLQAIFHRLKDVLFWSAYVGPNELHPDQGQTLNLGSLKLGLSYHF 240 YEEGHVDYQMYYKEHIANILQIFEAHLLKTHPELIQGAQLRNPNLRRSYSERAQRIFDFEKNDLRPLVLSPEETRKVTQY 320 THEITFGELKASTGALDVEALLHLYFDMLPQKGEQALSPCLDGKIAFTSSGVVVDDSLVLLIHEKDYFAKLETTLRSVDW 400 AVLHDYLLYKVVRSDASLLSRDFRDEIKRYSKRVTKAEPLPRWRTCVSSVPQWILSRSYVLGRFDREKKKSVQQMVSTIR 480 TAFKSLLEEYAWMDQSTRDEALEKLAGMKEKIGFPDWLLDDYETYFTRYYGDKSAALKLADTHFEIQWRLGLEAIRSQLA 560 EFGEPVDRNEWAMKPHSVNAYFSPSQNEIAFMAAVLQEPSLFVASPGASLGEETVVKALSYGAIAGVIAHEITHGFDDVG 640 KEYDVNGRLRNWWTPESEAAFKAEATCMKDQYSGYSVVIAEVDDVAEAESRHASREVKEVNTDTNTRQKTVRVRGDLTLG 720 ENIADNGGIQLAWAALKLELSPEQLASRPLENYGIPLTTAQLFTFSWGHFWCEIALDSFIRRQVETDPHCPARFRIQGPL 800 ANFHLFAEQEQCPVGSVMNPEKKCRVW 880 .........................................................................P...... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ........................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_002180 3 ----MIK|RD 0.055 . NCLIV_002180 4 ---MIKR|DM 0.170 . NCLIV_002180 9 KRDMNPR|AD 0.102 . NCLIV_002180 25 YFCGGWK|AR 0.054 . NCLIV_002180 27 CGGWKAR|TS 0.113 . NCLIV_002180 46 SFDTLAR|DT 0.140 . NCLIV_002180 49 TLARDTR|EY 0.210 . NCLIV_002180 53 DTREYLK|TT 0.059 . NCLIV_002180 59 KTTLEAR|SC 0.126 . NCLIV_002180 65 RSCADMR|AE 0.092 . NCLIV_002180 69 DMRAELR|SR 0.118 . NCLIV_002180 71 RAELRSR|SQ 0.122 . NCLIV_002180 74 LRSRSQR|GG 0.586 *ProP* NCLIV_002180 78 SQRGGDR|IV 0.107 . NCLIV_002180 81 GGDRIVK|TN 0.076 . NCLIV_002180 89 NALHSER|DP 0.097 . NCLIV_002180 92 HSERDPK|VS 0.107 . NCLIV_002180 110 TVSGETR|DR 0.132 . NCLIV_002180 112 SGETRDR|VD 0.076 . NCLIV_002180 136 EEAIDAR|GA 0.138 . NCLIV_002180 144 ATPLTDR|MF 0.113 . NCLIV_002180 169 DFEAEAR|EL 0.086 . NCLIV_002180 173 EARELAR|GT 0.103 . NCLIV_002180 189 WMFSESR|ET 0.077 . NCLIV_002180 196 ETVLVQR|LQ 0.067 . NCLIV_002180 203 LQAIFHR|LK 0.099 . NCLIV_002180 205 AIFHRLK|DV 0.065 . NCLIV_002180 233 LNLGSLK|LG 0.055 . NCLIV_002180 253 DYQMYYK|EH 0.064 . NCLIV_002180 269 FEAHLLK|TH 0.056 . NCLIV_002180 281 IQGAQLR|NP 0.081 . NCLIV_002180 286 LRNPNLR|RS 0.104 . NCLIV_002180 287 RNPNLRR|SY 0.213 . NCLIV_002180 292 RRSYSER|AQ 0.130 . NCLIV_002180 295 YSERAQR|IF 0.226 . NCLIV_002180 301 RIFDFEK|ND 0.057 . NCLIV_002180 305 FEKNDLR|PL 0.069 . NCLIV_002180 315 LSPEETR|KV 0.117 . NCLIV_002180 316 SPEETRK|VT 0.077 . NCLIV_002180 330 ITFGELK|AS 0.068 . NCLIV_002180 352 FDMLPQK|GE 0.060 . NCLIV_002180 364 SPCLDGK|IA 0.078 . NCLIV_002180 385 VLLIHEK|DY 0.080 . NCLIV_002180 390 EKDYFAK|LE 0.064 . NCLIV_002180 396 KLETTLR|SV 0.185 . NCLIV_002180 410 HDYLLYK|VV 0.066 . NCLIV_002180 413 LLYKVVR|SD 0.116 . NCLIV_002180 421 DASLLSR|DF 0.125 . NCLIV_002180 424 LLSRDFR|DE 0.335 . NCLIV_002180 428 DFRDEIK|RY 0.060 . NCLIV_002180 429 FRDEIKR|YS 0.200 . NCLIV_002180 432 EIKRYSK|RV 0.189 . NCLIV_002180 433 IKRYSKR|VT 0.226 . NCLIV_002180 436 YSKRVTK|AE 0.090 . NCLIV_002180 442 KAEPLPR|WR 0.080 . NCLIV_002180 444 EPLPRWR|TC 0.079 . NCLIV_002180 457 PQWILSR|SY 0.099 . NCLIV_002180 463 RSYVLGR|FD 0.110 . NCLIV_002180 466 VLGRFDR|EK 0.339 . NCLIV_002180 468 GRFDREK|KK 0.080 . NCLIV_002180 469 RFDREKK|KS 0.281 . NCLIV_002180 470 FDREKKK|SV 0.321 . NCLIV_002180 480 QMVSTIR|TA 0.105 . NCLIV_002180 484 TIRTAFK|SL 0.108 . NCLIV_002180 498 WMDQSTR|DE 0.075 . NCLIV_002180 504 RDEALEK|LA 0.084 . NCLIV_002180 509 EKLAGMK|EK 0.060 . NCLIV_002180 511 LAGMKEK|IG 0.066 . NCLIV_002180 528 YETYFTR|YY 0.109 . NCLIV_002180 533 TRYYGDK|SA 0.107 . NCLIV_002180 538 DKSAALK|LA 0.083 . NCLIV_002180 549 HFEIQWR|LG 0.084 . NCLIV_002180 556 LGLEAIR|SQ 0.093 . NCLIV_002180 568 FGEPVDR|NE 0.081 . NCLIV_002180 574 RNEWAMK|PH 0.070 . NCLIV_002180 617 GEETVVK|AL 0.072 . NCLIV_002180 641 GFDDVGK|EY 0.065 . NCLIV_002180 648 EYDVNGR|LR 0.069 . NCLIV_002180 650 DVNGRLR|NW 0.103 . NCLIV_002180 662 ESEAAFK|AE 0.066 . NCLIV_002180 669 AEATCMK|DQ 0.075 . NCLIV_002180 691 VAEAESR|HA 0.108 . NCLIV_002180 695 ESRHASR|EV 0.166 . NCLIV_002180 698 HASREVK|EV 0.257 . NCLIV_002180 707 NTDTNTR|QK 0.073 . NCLIV_002180 709 DTNTRQK|TV 0.074 . NCLIV_002180 712 TRQKTVR|VR 0.134 . NCLIV_002180 714 QKTVRVR|GD 0.088 . NCLIV_002180 737 LAWAALK|LE 0.053 . NCLIV_002180 748 PEQLASR|PL 0.085 . NCLIV_002180 781 ALDSFIR|RQ 0.072 . NCLIV_002180 782 LDSFIRR|QV 0.340 . NCLIV_002180 793 DPHCPAR|FR 0.179 . NCLIV_002180 795 HCPARFR|IQ 0.090 . NCLIV_002180 822 SVMNPEK|KC 0.065 . NCLIV_002180 823 VMNPEKK|CR 0.088 . NCLIV_002180 825 NPEKKCR|VW 0.117 . ____________________________^_________________

  • Fasta :-

    >NCLIV_002180 ATGATAAAACGCGATATGAACCCACGAGCCGATCCTTGCTACGAGGTAGAGGAGTACTTT TGTGGCGGGTGGAAAGCCCGAACTTCTCTCCCAGCAGACGAGAGCTCGTGGACTCTGTCG TTTGACACTTTAGCACGCGACACAAGAGAGTACTTGAAAACAACGCTAGAGGCAAGAAGC TGCGCGGATATGCGGGCCGAGCTCCGGTCGAGAAGCCAGAGGGGGGGCGACAGGATAGTG AAAACGAACGCTCTCCATAGCGAACGCGATCCGAAAGTGTCGCTTTCCTCCAGCCACAGC TCCCCGTCTACTGTGTCCGGAGAAACAAGGGACCGGGTAGATGAGTGGGACGTGCTCGCT GCATGCATGTACGAAGCCTGCATGGATGAGGAGGCGATCGACGCTCGCGGGGCAACGCCC CTTACAGATCGCATGTTTGGTGGATCCGAGGCAGGTTATGTGTCTCTGGACTTCTTGCTC GATACGGACTTCGAAGCCGAAGCACGAGAACTCGCACGCGGAACGGCGCACCCAGATGCG TCGCCTTGGATGTTTTCTGAGTCGCGCGAAACAGTGCTTGTGCAGCGATTACAAGCGATA TTCCACCGTCTGAAAGACGTGTTGTTCTGGTCGGCGTATGTGGGCCCAAATGAGCTACAC CCCGACCAAGGACAAACTTTGAATCTGGGGAGTCTCAAACTCGGCTTGTCGTACCACTTC TACGAAGAGGGTCACGTGGACTATCAGATGTACTACAAAGAACACATCGCCAACATTCTC CAGATATTCGAGGCACACTTGCTGAAGACGCACCCCGAGTTGATTCAGGGAGCTCAACTG CGAAACCCGAATCTGAGACGCAGCTACTCCGAGCGAGCGCAGAGGATCTTTGACTTTGAA AAAAACGACCTTCGCCCTCTGGTCCTCTCTCCCGAAGAAACACGGAAAGTGACACAGTAC ACACACGAAATTACATTTGGCGAGCTGAAGGCTTCCACTGGGGCCTTGGATGTCGAGGCG CTGCTCCATCTGTATTTCGACATGCTGCCTCAGAAAGGAGAGCAGGCTTTGTCCCCCTGT TTGGACGGGAAGATCGCCTTCACGTCTTCAGGCGTCGTTGTAGACGACAGCCTTGTGCTC CTAATCCACGAAAAAGACTACTTTGCCAAACTCGAGACGACGCTGCGCTCTGTCGACTGG GCGGTCTTACACGACTACCTGCTGTACAAAGTTGTCAGAAGCGACGCGAGTCTGTTGTCT AGGGATTTTCGCGACGAGATTAAACGCTACTCGAAGCGGGTCACGAAGGCCGAGCCACTT CCCCGCTGGCGCACGTGCGTTTCGTCTGTGCCGCAGTGGATTTTGTCGCGGAGTTACGTG CTCGGGCGGTTCGACAGAGAGAAGAAGAAATCAGTCCAGCAGATGGTCTCAACCATCCGC ACGGCATTCAAGAGCTTACTGGAAGAGTACGCGTGGATGGACCAGTCGACGCGTGATGAG GCGCTTGAAAAGCTCGCAGGGATGAAGGAGAAAATCGGCTTTCCTGACTGGCTTCTAGAC GACTACGAAACGTACTTCACGCGATACTACGGGGACAAGTCCGCCGCACTGAAACTCGCA GACACCCACTTCGAGATCCAGTGGCGCCTCGGTCTCGAGGCGATTCGGTCCCAGCTCGCA GAATTCGGAGAACCTGTTGATCGCAACGAGTGGGCGATGAAGCCGCACAGTGTAAACGCG TATTTCTCGCCCTCGCAAAACGAGATTGCCTTCATGGCGGCGGTCCTCCAGGAGCCGTCG CTCTTTGTGGCCAGCCCCGGGGCAAGCCTGGGCGAGGAGACCGTCGTGAAGGCGCTGAGC TACGGCGCGATCGCCGGGGTGATTGCGCACGAAATCACTCACGGCTTCGACGACGTAGGG AAAGAATACGACGTCAACGGACGCCTGCGGAATTGGTGGACGCCGGAGAGTGAGGCAGCC TTCAAAGCAGAAGCCACGTGCATGAAAGACCAGTACAGCGGGTACAGCGTCGTTATCGCA GAGGTAGATGATGTTGCAGAGGCAGAGAGCAGACACGCGAGCCGGGAAGTGAAAGAGGTG AACACAGATACAAACACCAGACAGAAAACAGTTCGAGTGAGAGGCGACTTGACTCTAGGG GAGAATATCGCAGACAATGGCGGGATTCAGCTGGCCTGGGCAGCTTTGAAACTCGAATTG TCGCCTGAGCAACTTGCGTCGCGACCCCTGGAGAACTACGGGATCCCACTCACAACCGCG CAACTCTTCACTTTTTCCTGGGGACATTTCTGGTGTGAGATCGCTCTGGACAGCTTCATT CGCCGGCAGGTTGAAACTGACCCGCACTGTCCCGCGCGATTCCGCATTCAGGGCCCTCTA GCCAATTTCCACCTCTTTGCTGAGCAAGAACAGTGCCCAGTGGGAAGCGTGATGAATCCA GAGAAGAAATGCCGAGTGTGGTAA
  • Download Fasta

  • Fasta :-

    MIKRDMNPRADPCYEVEEYFCGGWKARTSLPADESSWTLSFDTLARDTREYLKTTLEARS CADMRAELRSRSQRGGDRIVKTNALHSERDPKVSLSSSHSSPSTVSGETRDRVDEWDVLA ACMYEACMDEEAIDARGATPLTDRMFGGSEAGYVSLDFLLDTDFEAEARELARGTAHPDA SPWMFSESRETVLVQRLQAIFHRLKDVLFWSAYVGPNELHPDQGQTLNLGSLKLGLSYHF YEEGHVDYQMYYKEHIANILQIFEAHLLKTHPELIQGAQLRNPNLRRSYSERAQRIFDFE KNDLRPLVLSPEETRKVTQYTHEITFGELKASTGALDVEALLHLYFDMLPQKGEQALSPC LDGKIAFTSSGVVVDDSLVLLIHEKDYFAKLETTLRSVDWAVLHDYLLYKVVRSDASLLS RDFRDEIKRYSKRVTKAEPLPRWRTCVSSVPQWILSRSYVLGRFDREKKKSVQQMVSTIR TAFKSLLEEYAWMDQSTRDEALEKLAGMKEKIGFPDWLLDDYETYFTRYYGDKSAALKLA DTHFEIQWRLGLEAIRSQLAEFGEPVDRNEWAMKPHSVNAYFSPSQNEIAFMAAVLQEPS LFVASPGASLGEETVVKALSYGAIAGVIAHEITHGFDDVGKEYDVNGRLRNWWTPESEAA FKAEATCMKDQYSGYSVVIAEVDDVAEAESRHASREVKEVNTDTNTRQKTVRVRGDLTLG ENIADNGGIQLAWAALKLELSPEQLASRPLENYGIPLTTAQLFTFSWGHFWCEIALDSFI RRQVETDPHCPARFRIQGPLANFHLFAEQEQCPVGSVMNPEKKCRVW

  • title: Zn binding site
  • coordinates: H630,H634,E721
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_00218087 SNALHSERDP0.998unspNCLIV_00218087 SNALHSERDP0.998unspNCLIV_00218087 SNALHSERDP0.998unspNCLIV_002180288 SNLRRSYSER0.997unspNCLIV_002180290 SRRSYSERAQ0.994unspNCLIV_002180310 SPLVLSPEET0.998unspNCLIV_002180431 SIKRYSKRVT0.996unspNCLIV_00218060 SLEARSCADM0.991unspNCLIV_00218072 SLRSRSQRGG0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India