NCLIV_003910 | cathepsin D enzyme, related

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_003910SP0.0304310.9648610.004707CS pos: 20-21. GVG-YK. Pr: 0.3780
No Results

  • Fasta :-

    >NCLIV_003910 MGLSKAIAVILLTLPFAGVGYKAKWCTASPAAQGALTEKKLVRRIQRHDWPHTRLLSLAL RNHRSTQYFGEISVGTPPSLFKVVFDSGSHQFWIPSKECQSSSCRTHSRLDCSRSSSCRD HGNTGWNESVAVTFGTGRIVYRKALETVKIGDVVIPSQAIGLVVDQTDEPFANLPFDGIV GLGECSLLYTRVPLLSGSRLAGSTELTGEKDLLDNMKNEGIITDRVFAFYLSRRSALGGV ISFGGFDPRFVQPGKPIQWIGMLPQKGWAMPLIDFKVDGVRLDLCFDSAASRCAAVLDTG TSSIGGPRADIHHILTMLGAAPRCERKLAMKSLTVIIEQEAGREIEFELTPDDYVVDNLK PSDDSTSCPAAFMPLELKRHPVRTFVLGEVFIRKFYAIFDRENKKIGECTKHRRHAYTWA LSFPFLSRPCRSCYRREA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_003910.fa Sequence name : NCLIV_003910 Sequence length : 438 VALUES OF COMPUTED PARAMETERS Coef20 : 4.111 CoefTot : -0.195 ChDiff : 11 ZoneTo : 37 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.512 1.965 0.213 0.666 MesoH : -0.434 0.526 -0.257 0.255 MuHd_075 : 14.466 10.658 4.404 3.977 MuHd_095 : 12.722 12.530 4.550 4.035 MuHd_100 : 12.218 11.128 4.807 3.392 MuHd_105 : 20.555 12.977 6.962 4.059 Hmax_075 : 17.800 6.100 1.251 7.000 Hmax_095 : 15.925 10.800 3.848 6.825 Hmax_100 : 14.800 21.800 4.238 7.200 Hmax_105 : 15.500 21.400 3.581 6.860 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8164 0.1836 DFMC : 0.8346 0.1654
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 438 NCLIV_003910 MGLSKAIAVILLTLPFAGVGYKAKWCTASPAAQGALTEKKLVRRIQRHDWPHTRLLSLALRNHRSTQYFGEISVGTPPSL 80 FKVVFDSGSHQFWIPSKECQSSSCRTHSRLDCSRSSSCRDHGNTGWNESVAVTFGTGRIVYRKALETVKIGDVVIPSQAI 160 GLVVDQTDEPFANLPFDGIVGLGECSLLYTRVPLLSGSRLAGSTELTGEKDLLDNMKNEGIITDRVFAFYLSRRSALGGV 240 ISFGGFDPRFVQPGKPIQWIGMLPQKGWAMPLIDFKVDGVRLDLCFDSAASRCAAVLDTGTSSIGGPRADIHHILTMLGA 320 APRCERKLAMKSLTVIIEQEAGREIEFELTPDDYVVDNLKPSDDSTSCPAAFMPLELKRHPVRTFVLGEVFIRKFYAIFD 400 RENKKIGECTKHRRHAYTWALSFPFLSRPCRSCYRREA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_003910 5 --MGLSK|AI 0.073 . NCLIV_003910 22 FAGVGYK|AK 0.057 . NCLIV_003910 24 GVGYKAK|WC 0.083 . NCLIV_003910 39 QGALTEK|KL 0.059 . NCLIV_003910 40 GALTEKK|LV 0.141 . NCLIV_003910 43 TEKKLVR|RI 0.090 . NCLIV_003910 44 EKKLVRR|IQ 0.120 . NCLIV_003910 47 LVRRIQR|HD 0.262 . NCLIV_003910 54 HDWPHTR|LL 0.113 . NCLIV_003910 61 LLSLALR|NH 0.075 . NCLIV_003910 64 LALRNHR|ST 0.264 . NCLIV_003910 82 TPPSLFK|VV 0.095 . NCLIV_003910 97 QFWIPSK|EC 0.057 . NCLIV_003910 105 CQSSSCR|TH 0.087 . NCLIV_003910 109 SCRTHSR|LD 0.081 . NCLIV_003910 114 SRLDCSR|SS 0.133 . NCLIV_003910 119 SRSSSCR|DH 0.227 . NCLIV_003910 138 VTFGTGR|IV 0.092 . NCLIV_003910 142 TGRIVYR|KA 0.110 . NCLIV_003910 143 GRIVYRK|AL 0.125 . NCLIV_003910 149 KALETVK|IG 0.062 . NCLIV_003910 191 CSLLYTR|VP 0.057 . NCLIV_003910 199 PLLSGSR|LA 0.082 . NCLIV_003910 210 TELTGEK|DL 0.065 . NCLIV_003910 217 DLLDNMK|NE 0.070 . NCLIV_003910 225 EGIITDR|VF 0.071 . NCLIV_003910 233 FAFYLSR|RS 0.072 . NCLIV_003910 234 AFYLSRR|SA 0.288 . NCLIV_003910 249 FGGFDPR|FV 0.166 . NCLIV_003910 255 RFVQPGK|PI 0.075 . NCLIV_003910 266 IGMLPQK|GW 0.065 . NCLIV_003910 276 MPLIDFK|VD 0.063 . NCLIV_003910 281 FKVDGVR|LD 0.063 . NCLIV_003910 292 FDSAASR|CA 0.099 . NCLIV_003910 308 SSIGGPR|AD 0.098 . NCLIV_003910 323 MLGAAPR|CE 0.082 . NCLIV_003910 326 AAPRCER|KL 0.155 . NCLIV_003910 327 APRCERK|LA 0.131 . NCLIV_003910 331 ERKLAMK|SL 0.107 . NCLIV_003910 343 IEQEAGR|EI 0.096 . NCLIV_003910 360 YVVDNLK|PS 0.059 . NCLIV_003910 378 FMPLELK|RH 0.049 . NCLIV_003910 379 MPLELKR|HP 0.128 . NCLIV_003910 383 LKRHPVR|TF 0.101 . NCLIV_003910 393 LGEVFIR|KF 0.094 . NCLIV_003910 394 GEVFIRK|FY 0.081 . NCLIV_003910 401 FYAIFDR|EN 0.101 . NCLIV_003910 404 IFDRENK|KI 0.134 . NCLIV_003910 405 FDRENKK|IG 0.085 . NCLIV_003910 411 KIGECTK|HR 0.067 . NCLIV_003910 413 GECTKHR|RH 0.071 . NCLIV_003910 414 ECTKHRR|HA 0.180 . NCLIV_003910 428 SFPFLSR|PC 0.076 . NCLIV_003910 431 FLSRPCR|SC 0.494 . NCLIV_003910 435 PCRSCYR|RE 0.071 . NCLIV_003910 436 CRSCYRR|EA 0.312 . ____________________________^_________________

  • Fasta :-

    >NCLIV_003910 ATGGGACTGTCCAAGGCTATTGCAGTGATTCTGCTGACTCTTCCCTTCGCTGGAGTCGGT TACAAAGCAAAGTGGTGTACAGCGTCCCCCGCAGCGCAGGGCGCACTCACAGAAAAGAAG CTGGTCCGCCGTATTCAGAGACACGACTGGCCACATACGCGCCTATTGTCTCTGGCCCTG CGAAATCACCGGAGCACGCAGTATTTCGGAGAGATCTCTGTCGGCACCCCACCTTCATTG TTCAAAGTCGTGTTTGATTCTGGCAGCCATCAGTTTTGGATCCCTTCAAAAGAGTGCCAG TCTTCCTCATGCAGAACTCATTCCCGCTTGGACTGTAGCCGCTCGTCAAGCTGTCGCGAC CACGGTAACACTGGGTGGAACGAGAGTGTCGCCGTTACCTTCGGAACCGGGCGCATCGTT TACCGAAAAGCGTTAGAGACAGTCAAAATCGGAGATGTAGTGATCCCCAGCCAAGCTATC GGACTCGTGGTTGATCAGACGGACGAGCCGTTTGCAAATCTACCGTTTGACGGAATCGTA GGGCTGGGTGAGTGCTCTCTCTTGTACACACGTGTGCCATTGTTAAGTGGTTCCCGCTTA GCTGGCTCGACTGAACTCACCGGAGAAAAAGATTTACTCGATAATATGAAAAACGAGGGT ATTATAACCGACAGGGTTTTCGCCTTCTACCTGTCCAGACGCAGCGCTTTGGGCGGTGTA ATAAGTTTTGGAGGATTTGATCCCAGATTTGTTCAGCCAGGGAAACCCATTCAGTGGATT GGCATGCTTCCTCAAAAAGGCTGGGCAATGCCACTGATCGATTTCAAAGTCGACGGTGTC AGACTCGATCTTTGTTTCGACTCTGCTGCGAGCAGATGCGCAGCTGTTTTAGACACCGGA ACTTCTAGCATTGGCGGACCCAGGGCCGACATCCATCATATACTCACGATGCTCGGAGCA GCACCACGCTGCGAACGCAAACTTGCCATGAAGTCTCTGACTGTCATAATCGAACAAGAA GCTGGACGGGAGATAGAGTTCGAACTGACGCCCGACGACTATGTAGTTGATAACCTGAAA CCGTCAGATGATTCCACTTCATGCCCCGCGGCATTCATGCCTCTGGAGTTGAAGCGACAC CCTGTCCGCACCTTCGTTCTTGGTGAGGTTTTCATCAGAAAATTCTACGCGATCTTTGAT CGCGAGAATAAGAAAATTGGTGAGTGCACGAAACACCGAAGACACGCGTATACCTGGGCG TTATCATTCCCATTTCTTTCCAGGCCTTGTCGAAGCTGCTACAGACGCGAAGCCTAG
  • Download Fasta

  • Fasta :-

    MGLSKAIAVILLTLPFAGVGYKAKWCTASPAAQGALTEKKLVRRIQRHDWPHTRLLSLAL RNHRSTQYFGEISVGTPPSLFKVVFDSGSHQFWIPSKECQSSSCRTHSRLDCSRSSSCRD HGNTGWNESVAVTFGTGRIVYRKALETVKIGDVVIPSQAIGLVVDQTDEPFANLPFDGIV GLGECSLLYTRVPLLSGSRLAGSTELTGEKDLLDNMKNEGIITDRVFAFYLSRRSALGGV ISFGGFDPRFVQPGKPIQWIGMLPQKGWAMPLIDFKVDGVRLDLCFDSAASRCAAVLDTG TSSIGGPRADIHHILTMLGAAPRCERKLAMKSLTVIIEQEAGREIEFELTPDDYVVDNLK PSDDSTSCPAAFMPLELKRHPVRTFVLGEVFIRKFYAIFDRENKKIGECTKHRRHAYTWA LSFPFLSRPCRSCYRREA

  • title: catalytic residue
  • coordinates: D86,D298
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_003910116 SCSRSSSCRD0.993unspNCLIV_003910117 SSRSSSCRDH0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India