NCLIV_004530 | putative microsomal signal peptidase subunit SPCS1 domain-containing protein

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NCLIV_004530	OTHER	0.998329	0.001027	0.000643

No Results

Fasta :-
>NCLIV_004530 MAICSCVGSIYSAFAAVKSGVVDFKGQERVYSVLVYLAWAAGLIGFFVGGIFEDFSITIY TILICMALTAILCFPSWPMYNRHPVEWTPHDPDRLAALFTQQQQNQEGASHQEPSSGGKG RGKKHVESQRRK
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MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_004530.fa Sequence name : NCLIV_004530 Sequence length : 132 VALUES OF COMPUTED PARAMETERS Coef20 : 4.457 CoefTot : 0.242 ChDiff : 2 ZoneTo : 22 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.235 2.412 0.610 0.869 MesoH : 0.805 1.290 0.079 0.517 MuHd_075 : 11.118 12.738 5.292 3.499 MuHd_095 : 8.195 16.273 3.292 2.986 MuHd_100 : 11.574 18.793 4.768 4.691 MuHd_105 : 17.222 22.585 6.416 6.369 Hmax_075 : 13.600 17.400 3.896 5.320 Hmax_095 : 14.700 19.863 4.091 5.066 Hmax_100 : 18.700 24.500 5.634 7.110 Hmax_105 : 16.400 21.400 5.231 6.750 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7221 0.2779 DFMC : 0.8366 0.1634

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 132 NCLIV_004530 MAICSCVGSIYSAFAAVKSGVVDFKGQERVYSVLVYLAWAAGLIGFFVGGIFEDFSITIYTILICMALTAILCFPSWPMY 80 NRHPVEWTPHDPDRLAALFTQQQQNQEGASHQEPSSGGKGRGKKHVESQRRK 160 ................................................................................ 80 ...........................................P........ 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_004530 18 SAFAAVK|SG 0.070 . NCLIV_004530 25 SGVVDFK|GQ 0.075 . NCLIV_004530 29 DFKGQER|VY 0.075 . NCLIV_004530 82 SWPMYNR|HP 0.080 . NCLIV_004530 94 TPHDPDR|LA 0.126 . NCLIV_004530 119 EPSSGGK|GR 0.081 . NCLIV_004530 121 SSGGKGR|GK 0.228 . NCLIV_004530 123 GGKGRGK|KH 0.061 . NCLIV_004530 124 GKGRGKK|HV 0.662 *ProP* NCLIV_004530 130 KHVESQR|RK 0.083 . NCLIV_004530 131 HVESQRR|K- 0.129 . NCLIV_004530 132 VESQRRK|-- 0.100 . ____________________________^_________________

Fasta :-
>NCLIV_004530 ATGGCGATCTGTTCGTGTGTCGGGTCGATTTACTCCGCTTTCGCGGCTGTGAAGTCGGGG GTTGTTGACTTCAAGGGACAGGAGCGCGTCTACTCCGTGCTGGTTTACCTTGCCTGGGCC GCCGGGCTCATCGGGTTCTTCGTCGGCGGTATCTTCGAAGATTTTAGCATCACAATCTAC ACAATTTTAATTTGTATGGCCCTTACTGCGATCCTGTGTTTCCCTTCGTGGCCAATGTAC AACAGACACCCTGTCGAGTGGACTCCTCACGACCCCGACAGACTGGCGGCTCTTTTCACT CAGCAACAGCAAAACCAGGAAGGCGCAAGTCATCAGGAGCCTTCTAGTGGGGGGAAAGGG AGAGGGAAGAAGCATGTTGAATCGCAACGGAGAAAGTGA
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Fasta :-

MAICSCVGSIYSAFAAVKSGVVDFKGQERVYSVLVYLAWAAGLIGFFVGGIFEDFSITIY TILICMALTAILCFPSWPMYNRHPVEWTPHDPDRLAALFTQQQQNQEGASHQEPSSGGKG RGKKHVESQRRK