NCLIV_006860 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004177      GO:0008270      

  • Computed_GO_Functions:  aminopeptidase activity      zinc ion binding      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_006860OTHER0.7221320.0109430.266925
No Results

  • Fasta :-

    >NCLIV_006860 MLSASSAAAAALLEGGRKYGANFLSFVNETGSPYHSVLAVQRRLLASGFSQLDEREKWDL RLGGKYFVTRNQSCIAAFVIGEKFKATSGGFTIVAAHTDSPCLRLRPNSNVKKEGIQQVG VECYGGGLWHTWFDRGLGVAGKVVVKAKDGSALTEKLIRIDRPILVLPNLAIHLQSAEEI SAFKINKEIHLQPVLCTEVYRQLLAANEKDATGDEKRTDEANSEAEVKNACPLLNKRKDE RAAPPLLTLIAKELEVEIQDIVEWDLCLMDATPGRFCGVHEEFVESPRLDNLGSTWAAFS ALLECGSPHPEEISMAVGFDHEEIGSESYTGAGSSVLMVWMERIAQALSVGDTYPQILSR SFLVSSDMAHGVHPNYADRHQGQNKPLMQQGVVIKENANQRYATNAASMALTRAVAERGQ VPMQLFTVKNDSRCGSTVGPILSARLGVRTIDIGIPQWAMHSCRETCGILDLFALQLLLK EFFASFRSIDTNYESI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_006860.fa Sequence name : NCLIV_006860 Sequence length : 496 VALUES OF COMPUTED PARAMETERS Coef20 : 4.090 CoefTot : 0.333 ChDiff : -8 ZoneTo : 52 KR : 4 DE : 2 CleavSite : 53 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.024 1.482 0.060 0.549 MesoH : -0.240 0.408 -0.295 0.246 MuHd_075 : 28.402 12.550 7.159 6.157 MuHd_095 : 39.916 22.567 11.327 8.333 MuHd_100 : 39.656 24.732 11.472 8.590 MuHd_105 : 29.575 21.215 9.890 7.232 Hmax_075 : 8.283 12.400 1.459 4.540 Hmax_095 : 14.100 12.338 2.177 5.820 Hmax_100 : 16.700 17.600 3.337 6.560 Hmax_105 : 13.387 16.100 1.803 4.730 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8734 0.1266 DFMC : 0.7686 0.2314
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 496 NCLIV_006860 MLSASSAAAAALLEGGRKYGANFLSFVNETGSPYHSVLAVQRRLLASGFSQLDEREKWDLRLGGKYFVTRNQSCIAAFVI 80 GEKFKATSGGFTIVAAHTDSPCLRLRPNSNVKKEGIQQVGVECYGGGLWHTWFDRGLGVAGKVVVKAKDGSALTEKLIRI 160 DRPILVLPNLAIHLQSAEEISAFKINKEIHLQPVLCTEVYRQLLAANEKDATGDEKRTDEANSEAEVKNACPLLNKRKDE 240 RAAPPLLTLIAKELEVEIQDIVEWDLCLMDATPGRFCGVHEEFVESPRLDNLGSTWAAFSALLECGSPHPEEISMAVGFD 320 HEEIGSESYTGAGSSVLMVWMERIAQALSVGDTYPQILSRSFLVSSDMAHGVHPNYADRHQGQNKPLMQQGVVIKENANQ 400 RYATNAASMALTRAVAERGQVPMQLFTVKNDSRCGSTVGPILSARLGVRTIDIGIPQWAMHSCRETCGILDLFALQLLLK 480 EFFASFRSIDTNYESI 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_006860 17 ALLEGGR|KY 0.087 . NCLIV_006860 18 LLEGGRK|YG 0.072 . NCLIV_006860 42 SVLAVQR|RL 0.088 . NCLIV_006860 43 VLAVQRR|LL 0.193 . NCLIV_006860 55 FSQLDER|EK 0.082 . NCLIV_006860 57 QLDEREK|WD 0.057 . NCLIV_006860 61 REKWDLR|LG 0.087 . NCLIV_006860 65 DLRLGGK|YF 0.060 . NCLIV_006860 70 GKYFVTR|NQ 0.107 . NCLIV_006860 83 AFVIGEK|FK 0.062 . NCLIV_006860 85 VIGEKFK|AT 0.099 . NCLIV_006860 104 TDSPCLR|LR 0.082 . NCLIV_006860 106 SPCLRLR|PN 0.106 . NCLIV_006860 112 RPNSNVK|KE 0.079 . NCLIV_006860 113 PNSNVKK|EG 0.148 . NCLIV_006860 135 WHTWFDR|GL 0.131 . NCLIV_006860 142 GLGVAGK|VV 0.079 . NCLIV_006860 146 AGKVVVK|AK 0.070 . NCLIV_006860 148 KVVVKAK|DG 0.089 . NCLIV_006860 156 GSALTEK|LI 0.067 . NCLIV_006860 159 LTEKLIR|ID 0.086 . NCLIV_006860 162 KLIRIDR|PI 0.159 . NCLIV_006860 184 EEISAFK|IN 0.058 . NCLIV_006860 187 SAFKINK|EI 0.071 . NCLIV_006860 201 LCTEVYR|QL 0.087 . NCLIV_006860 209 LLAANEK|DA 0.083 . NCLIV_006860 216 DATGDEK|RT 0.064 . NCLIV_006860 217 ATGDEKR|TD 0.166 . NCLIV_006860 228 NSEAEVK|NA 0.071 . NCLIV_006860 236 ACPLLNK|RK 0.051 . NCLIV_006860 237 CPLLNKR|KD 0.127 . NCLIV_006860 238 PLLNKRK|DE 0.102 . NCLIV_006860 241 NKRKDER|AA 0.116 . NCLIV_006860 252 LLTLIAK|EL 0.072 . NCLIV_006860 275 MDATPGR|FC 0.153 . NCLIV_006860 288 EFVESPR|LD 0.072 . NCLIV_006860 343 LMVWMER|IA 0.082 . NCLIV_006860 360 YPQILSR|SF 0.120 . NCLIV_006860 379 HPNYADR|HQ 0.133 . NCLIV_006860 385 RHQGQNK|PL 0.086 . NCLIV_006860 395 QQGVVIK|EN 0.068 . NCLIV_006860 401 KENANQR|YA 0.134 . NCLIV_006860 413 ASMALTR|AV 0.123 . NCLIV_006860 418 TRAVAER|GQ 0.134 . NCLIV_006860 429 MQLFTVK|ND 0.072 . NCLIV_006860 433 TVKNDSR|CG 0.106 . NCLIV_006860 445 GPILSAR|LG 0.082 . NCLIV_006860 449 SARLGVR|TI 0.135 . NCLIV_006860 464 WAMHSCR|ET 0.159 . NCLIV_006860 480 ALQLLLK|EF 0.065 . NCLIV_006860 487 EFFASFR|SI 0.170 . ____________________________^_________________

  • Fasta :-

    >NCLIV_006860 ATGTTGAGTGCAAGCAGTGCAGCCGCCGCTGCACTTCTTGAAGGCGGCAGAAAATACGGC GCCAATTTTCTCTCGTTTGTCAACGAGACAGGCTCACCCTATCACTCAGTTCTCGCAGTT CAACGAAGGCTACTAGCCAGCGGCTTTTCTCAGCTGGATGAAAGAGAGAAGTGGGATCTG CGCCTCGGAGGAAAGTACTTTGTGACCCGCAATCAGTCGTGCATCGCCGCGTTCGTCATC GGCGAAAAGTTCAAAGCCACCAGCGGAGGTTTCACAATCGTTGCGGCCCACACAGACTCT CCCTGTCTGCGTCTCCGTCCTAACAGCAACGTGAAGAAGGAAGGCATTCAACAGGTCGGA GTCGAGTGCTACGGAGGCGGGCTGTGGCACACGTGGTTTGACCGAGGTTTAGGCGTCGCC GGGAAGGTTGTAGTGAAGGCAAAAGACGGGTCGGCGTTGACCGAGAAACTCATTCGCATA GATCGTCCGATCCTCGTCCTGCCGAATCTCGCCATTCACCTGCAGTCTGCAGAAGAAATT TCAGCCTTCAAAATCAACAAGGAAATCCACCTGCAACCCGTCCTTTGCACGGAGGTGTAC AGACAGCTGCTGGCGGCGAACGAGAAGGACGCAACAGGGGACGAGAAAAGGACCGACGAG GCAAACAGCGAAGCCGAAGTAAAAAACGCTTGCCCTCTCCTGAACAAGCGGAAGGACGAG CGCGCCGCTCCTCCGCTTCTCACTCTCATCGCAAAGGAGTTGGAAGTCGAGATCCAAGAT ATCGTCGAGTGGGATCTGTGTCTCATGGACGCCACACCTGGCAGGTTTTGCGGTGTCCAC GAAGAGTTCGTTGAATCCCCGCGCTTAGACAACTTGGGATCGACATGGGCTGCGTTCTCT GCCTTGCTGGAGTGCGGCAGTCCCCACCCTGAAGAGATTTCGATGGCGGTTGGCTTCGAT CACGAAGAAATCGGCAGTGAAAGCTACACAGGCGCGGGATCCAGCGTCTTGATGGTGTGG ATGGAGCGCATCGCACAGGCTCTTTCCGTCGGGGACACATATCCTCAAATCCTTTCCCGC TCGTTCCTCGTCAGCTCCGATATGGCGCATGGCGTCCATCCGAATTATGCTGATCGCCAC CAGGGCCAAAACAAACCCCTGATGCAGCAAGGCGTCGTCATCAAAGAAAATGCCAACCAA AGATACGCGACGAATGCGGCGTCGATGGCTCTCACGCGCGCAGTTGCTGAGAGAGGCCAG GTGCCCATGCAGCTGTTCACAGTCAAGAACGACTCGAGATGCGGCAGCACTGTGGGCCCG ATTCTCAGCGCGCGCCTCGGTGTCCGGACAATCGACATCGGCATTCCCCAGTGGGCGATG CACTCTTGCAGAGAAACGTGCGGCATTCTGGACCTCTTCGCACTTCAGTTGCTTCTTAAG GAATTCTTCGCGTCGTTCCGCTCGATTGACACCAACTACGAGAGCATCTAA
  • Download Fasta

  • Fasta :-

    MLSASSAAAAALLEGGRKYGANFLSFVNETGSPYHSVLAVQRRLLASGFSQLDEREKWDL RLGGKYFVTRNQSCIAAFVIGEKFKATSGGFTIVAAHTDSPCLRLRPNSNVKKEGIQQVG VECYGGGLWHTWFDRGLGVAGKVVVKAKDGSALTEKLIRIDRPILVLPNLAIHLQSAEEI SAFKINKEIHLQPVLCTEVYRQLLAANEKDATGDEKRTDEANSEAEVKNACPLLNKRKDE RAAPPLLTLIAKELEVEIQDIVEWDLCLMDATPGRFCGVHEEFVESPRLDNLGSTWAAFS ALLECGSPHPEEISMAVGFDHEEIGSESYTGAGSSVLMVWMERIAQALSVGDTYPQILSR SFLVSSDMAHGVHPNYADRHQGQNKPLMQQGVVIKENANQRYATNAASMALTRAVAERGQ VPMQLFTVKNDSRCGSTVGPILSARLGVRTIDIGIPQWAMHSCRETCGILDLFALQLLLK EFFASFRSIDTNYESI

  • title: metal binding site
  • coordinates: H97,D290,E322,E323,D367,H461
No Results
No Results
IDSitePeptideScoreMethod
NCLIV_006860349 SAQALSVGDT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India