NCLIV_007010 | putative cathepsin C2 (TgCPC2)

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_007010SP0.3450130.6516380.003349CS pos: 41-42. ALG-LP. Pr: 0.9100
No Results

  • Fasta :-

    >NCLIV_007010 MSPAGHLVATGTAQHGTSVGHSRLPRASFLAALLLVCRALGLPFWTKFVEPVRGDLPAHC LVRHVLGEWEIQEGLWLPCKGELTAAAAQLHDPYCGYGVPDKIDAHDPMTPPNISPSFHL LRTSRFTLHPDFRVDFDDGSTGVWTLVYDEGLHFEVTTPQSRRFFAFFKYEVAPDGRNLA WSYCHTTLVGWWDRVPQGDAVRQSLEPTPPAYDVPELVVPETPADQLLHSLKRGCWWGRK VGEDLSVPTNEVPKERRTPLDVPIWPTSLPPDIQSVAAVVRKSLSTDAPWEPVEDDYIEI RGRKLRSIQEVWENAGNQPLLMSRQHIEGRRATVKASLPLHVLSGVQPFGSPAGSEPPWR TIREFDWSNEEHVALRIGRRRSVVPDAPNQGRCGSCYAISTGTVLTSRLWIRYAANDDVF GKINVSAFQGTSCNVYNQGCGGGYVFLALKFGQEHGFRTEECVQEYTREAHHRSSPLSPS LQTCHDLGGQLGTSAYGCRAPPARSSLPESCSVSIKVASWQYVGGVYGGCSEDAMLRTLW EHGPMAASIEPTVAFTVYRKGVFKSAYNSLVQKGENWVWEKVDHAVVVVGWGWARHGDKW LPYWKVRNSWGARWGEGGYARVIRGVNEMAIERVAVVGEVSLFRDGKHIPPTPAKEPTTS QLAANSSTEPSGNREFSVETLPTLRGVTVMRAARTHQPSEDDREAGESESEAASEQAGAP EDADESRIDAKFAAPQPSFLSQSVKRHRT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_007010.fa Sequence name : NCLIV_007010 Sequence length : 749 VALUES OF COMPUTED PARAMETERS Coef20 : 3.341 CoefTot : -0.178 ChDiff : -8 ZoneTo : 49 KR : 4 DE : 0 CleavSite : 48 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.412 1.953 0.280 0.656 MesoH : -0.250 0.469 -0.242 0.270 MuHd_075 : 26.946 17.980 5.439 6.773 MuHd_095 : 35.501 15.732 7.227 7.864 MuHd_100 : 25.569 12.580 5.171 5.579 MuHd_105 : 18.122 12.383 5.204 4.516 Hmax_075 : 19.250 17.200 3.058 7.257 Hmax_095 : 15.300 9.700 4.016 5.530 Hmax_100 : 14.900 9.600 2.106 5.860 Hmax_105 : 14.700 23.917 5.512 6.673 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5050 0.4950 DFMC : 0.5663 0.4337
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 749 NCLIV_007010 MSPAGHLVATGTAQHGTSVGHSRLPRASFLAALLLVCRALGLPFWTKFVEPVRGDLPAHCLVRHVLGEWEIQEGLWLPCK 80 GELTAAAAQLHDPYCGYGVPDKIDAHDPMTPPNISPSFHLLRTSRFTLHPDFRVDFDDGSTGVWTLVYDEGLHFEVTTPQ 160 SRRFFAFFKYEVAPDGRNLAWSYCHTTLVGWWDRVPQGDAVRQSLEPTPPAYDVPELVVPETPADQLLHSLKRGCWWGRK 240 VGEDLSVPTNEVPKERRTPLDVPIWPTSLPPDIQSVAAVVRKSLSTDAPWEPVEDDYIEIRGRKLRSIQEVWENAGNQPL 320 LMSRQHIEGRRATVKASLPLHVLSGVQPFGSPAGSEPPWRTIREFDWSNEEHVALRIGRRRSVVPDAPNQGRCGSCYAIS 400 TGTVLTSRLWIRYAANDDVFGKINVSAFQGTSCNVYNQGCGGGYVFLALKFGQEHGFRTEECVQEYTREAHHRSSPLSPS 480 LQTCHDLGGQLGTSAYGCRAPPARSSLPESCSVSIKVASWQYVGGVYGGCSEDAMLRTLWEHGPMAASIEPTVAFTVYRK 560 GVFKSAYNSLVQKGENWVWEKVDHAVVVVGWGWARHGDKWLPYWKVRNSWGARWGEGGYARVIRGVNEMAIERVAVVGEV 640 SLFRDGKHIPPTPAKEPTTSQLAANSSTEPSGNREFSVETLPTLRGVTVMRAARTHQPSEDDREAGESESEAASEQAGAP 720 EDADESRIDAKFAAPQPSFLSQSVKRHRT 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................................................................P.............. 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_007010 23 TSVGHSR|LP 0.108 . NCLIV_007010 26 GHSRLPR|AS 0.300 . NCLIV_007010 38 ALLLVCR|AL 0.083 . NCLIV_007010 47 GLPFWTK|FV 0.116 . NCLIV_007010 53 KFVEPVR|GD 0.076 . NCLIV_007010 63 PAHCLVR|HV 0.117 . NCLIV_007010 80 GLWLPCK|GE 0.061 . NCLIV_007010 102 GYGVPDK|ID 0.062 . NCLIV_007010 122 PSFHLLR|TS 0.080 . NCLIV_007010 125 HLLRTSR|FT 0.212 . NCLIV_007010 133 TLHPDFR|VD 0.114 . NCLIV_007010 162 VTTPQSR|RF 0.075 . NCLIV_007010 163 TTPQSRR|FF 0.122 . NCLIV_007010 169 RFFAFFK|YE 0.058 . NCLIV_007010 177 EVAPDGR|NL 0.083 . NCLIV_007010 194 LVGWWDR|VP 0.067 . NCLIV_007010 202 PQGDAVR|QS 0.067 . NCLIV_007010 232 QLLHSLK|RG 0.061 . NCLIV_007010 233 LLHSLKR|GC 0.262 . NCLIV_007010 239 RGCWWGR|KV 0.154 . NCLIV_007010 240 GCWWGRK|VG 0.065 . NCLIV_007010 254 PTNEVPK|ER 0.064 . NCLIV_007010 256 NEVPKER|RT 0.080 . NCLIV_007010 257 EVPKERR|TP 0.105 . NCLIV_007010 281 SVAAVVR|KS 0.073 . NCLIV_007010 282 VAAVVRK|SL 0.184 . NCLIV_007010 301 DDYIEIR|GR 0.068 . NCLIV_007010 303 YIEIRGR|KL 0.087 . NCLIV_007010 304 IEIRGRK|LR 0.219 . NCLIV_007010 306 IRGRKLR|SI 0.657 *ProP* NCLIV_007010 324 QPLLMSR|QH 0.086 . NCLIV_007010 330 RQHIEGR|RA 0.105 . NCLIV_007010 331 QHIEGRR|AT 0.106 . NCLIV_007010 335 GRRATVK|AS 0.068 . NCLIV_007010 360 GSEPPWR|TI 0.107 . NCLIV_007010 363 PPWRTIR|EF 0.306 . NCLIV_007010 376 EEHVALR|IG 0.070 . NCLIV_007010 379 VALRIGR|RR 0.197 . NCLIV_007010 380 ALRIGRR|RS 0.083 . NCLIV_007010 381 LRIGRRR|SV 0.399 . NCLIV_007010 392 DAPNQGR|CG 0.084 . NCLIV_007010 408 GTVLTSR|LW 0.072 . NCLIV_007010 412 TSRLWIR|YA 0.110 . NCLIV_007010 422 NDDVFGK|IN 0.064 . NCLIV_007010 450 YVFLALK|FG 0.056 . NCLIV_007010 458 GQEHGFR|TE 0.091 . NCLIV_007010 468 CVQEYTR|EA 0.082 . NCLIV_007010 473 TREAHHR|SS 0.175 . NCLIV_007010 499 TSAYGCR|AP 0.079 . NCLIV_007010 504 CRAPPAR|SS 0.197 . NCLIV_007010 516 SCSVSIK|VA 0.100 . NCLIV_007010 537 SEDAMLR|TL 0.089 . NCLIV_007010 559 VAFTVYR|KG 0.069 . NCLIV_007010 560 AFTVYRK|GV 0.107 . NCLIV_007010 564 YRKGVFK|SA 0.136 . NCLIV_007010 573 YNSLVQK|GE 0.071 . NCLIV_007010 581 ENWVWEK|VD 0.065 . NCLIV_007010 595 VGWGWAR|HG 0.100 . NCLIV_007010 599 WARHGDK|WL 0.060 . NCLIV_007010 605 KWLPYWK|VR 0.052 . NCLIV_007010 607 LPYWKVR|NS 0.134 . NCLIV_007010 613 RNSWGAR|WG 0.151 . NCLIV_007010 621 GEGGYAR|VI 0.123 . NCLIV_007010 624 GYARVIR|GV 0.477 . NCLIV_007010 633 NEMAIER|VA 0.093 . NCLIV_007010 644 GEVSLFR|DG 0.118 . NCLIV_007010 647 SLFRDGK|HI 0.141 . NCLIV_007010 655 IPPTPAK|EP 0.069 . NCLIV_007010 674 TEPSGNR|EF 0.075 . NCLIV_007010 685 ETLPTLR|GV 0.095 . NCLIV_007010 691 RGVTVMR|AA 0.146 . NCLIV_007010 694 TVMRAAR|TH 0.338 . NCLIV_007010 703 QPSEDDR|EA 0.207 . NCLIV_007010 727 EDADESR|ID 0.078 . NCLIV_007010 731 ESRIDAK|FA 0.094 . NCLIV_007010 745 FLSQSVK|RH 0.070 . NCLIV_007010 746 LSQSVKR|HR 0.198 . NCLIV_007010 748 QSVKRHR|T- 0.098 . ____________________________^_________________

  • Fasta :-

    >NCLIV_007010 ATGTCACCTGCGGGGCATCTCGTCGCGACGGGGACAGCCCAGCACGGCACTTCCGTGGGC CACTCGAGACTCCCTCGCGCGTCCTTTCTCGCCGCGTTGCTGCTCGTTTGCCGTGCGCTC GGCCTCCCCTTCTGGACAAAGTTCGTAGAGCCTGTGCGAGGAGACTTACCCGCTCACTGC CTCGTCCGACATGTTTTAGGAGAATGGGAGATCCAAGAGGGACTCTGGCTGCCGTGCAAA GGCGAACTTACGGCAGCGGCGGCCCAGCTGCACGACCCATACTGCGGATACGGCGTCCCA GATAAGATCGACGCTCACGATCCCATGACCCCTCCCAACATTTCGCCGAGTTTCCATCTG CTTCGGACCTCGCGGTTCACGCTTCACCCCGATTTCCGAGTGGACTTTGACGACGGATCC ACAGGGGTTTGGACGCTCGTGTACGACGAGGGACTCCACTTTGAGGTGACAACTCCTCAA AGCCGGCGCTTCTTTGCGTTCTTCAAATACGAAGTTGCTCCGGATGGCCGAAACCTAGCG TGGAGCTACTGCCACACGACTCTCGTCGGGTGGTGGGATCGGGTTCCACAGGGAGACGCG GTTCGTCAGTCTTTGGAGCCGACACCGCCAGCTTACGACGTCCCCGAGCTGGTGGTCCCC GAGACACCCGCTGACCAGCTGCTGCACTCGCTCAAGCGCGGCTGCTGGTGGGGCCGCAAA GTGGGAGAAGATCTCTCGGTGCCGACGAACGAAGTTCCCAAAGAGCGCCGCACGCCTTTG GATGTTCCGATTTGGCCTACTTCGCTTCCCCCGGATATCCAGTCGGTCGCTGCGGTAGTG CGGAAAAGCCTGTCAACCGATGCCCCGTGGGAGCCCGTGGAAGACGACTACATCGAAATC CGAGGACGGAAGTTGCGGTCGATACAGGAAGTCTGGGAGAATGCAGGGAACCAACCGCTG CTGATGTCCAGGCAGCATATAGAGGGGAGGCGAGCGACAGTCAAAGCCAGTTTGCCCCTC CACGTTCTCTCCGGGGTCCAGCCCTTTGGAAGCCCCGCCGGGTCCGAGCCTCCCTGGCGA ACGATTCGAGAATTTGACTGGTCAAACGAAGAACATGTCGCTCTACGGATAGGAAGGCGG CGCTCGGTGGTGCCGGACGCGCCGAACCAAGGACGCTGCGGCTCGTGCTACGCGATCTCG ACGGGCACCGTGCTCACTTCTCGATTGTGGATTCGATACGCGGCGAACGATGACGTGTTC GGCAAGATTAACGTCAGTGCTTTTCAGGGAACCAGCTGCAACGTGTATAACCAAGGTTGC GGCGGCGGCTACGTTTTTCTGGCGCTGAAATTCGGCCAAGAGCACGGTTTCCGCACAGAA GAGTGCGTGCAAGAGTACACGAGAGAAGCGCACCACCGCAGCAGTCCCCTCTCGCCCTCC TTGCAGACTTGCCACGACCTCGGCGGCCAGCTCGGCACGTCAGCGTACGGCTGTCGAGCT CCGCCGGCGCGGTCGTCTTTGCCGGAGTCCTGCAGTGTCTCCATCAAAGTCGCTTCGTGG CAGTACGTTGGAGGCGTTTACGGAGGCTGCTCGGAAGATGCCATGCTGCGAACGCTCTGG GAGCACGGGCCGATGGCTGCGTCCATCGAGCCGACAGTCGCCTTCACCGTCTACAGGAAG GGCGTTTTCAAGTCGGCGTACAACAGCCTCGTCCAGAAAGGAGAAAATTGGGTGTGGGAG AAGGTGGACCACGCAGTGGTAGTCGTCGGCTGGGGCTGGGCGCGACACGGAGACAAATGG TTGCCTTACTGGAAAGTGAGAAACTCGTGGGGAGCGAGGTGGGGAGAGGGCGGCTACGCC AGAGTGATTCGGGGCGTCAACGAGATGGCTATCGAACGCGTTGCGGTGGTAGGGGAAGTT TCCCTTTTCCGGGATGGCAAACACATTCCCCCGACGCCAGCTAAGGAGCCCACCACATCG CAGCTTGCGGCAAATTCCTCAACAGAGCCGTCAGGAAACCGCGAGTTCTCCGTTGAAACA CTCCCTACTCTACGCGGAGTAACGGTGATGCGCGCCGCCCGGACTCACCAACCCTCTGAA GACGACCGAGAGGCTGGAGAGTCGGAGTCTGAAGCCGCCTCAGAGCAGGCAGGCGCTCCG GAGGATGCGGATGAATCCCGCATTGACGCGAAGTTTGCAGCGCCACAACCGTCTTTCCTT TCCCAGTCAGTCAAGCGTCACAGGACTTAG
  • Download Fasta

  • Fasta :-

    MSPAGHLVATGTAQHGTSVGHSRLPRASFLAALLLVCRALGLPFWTKFVEPVRGDLPAHC LVRHVLGEWEIQEGLWLPCKGELTAAAAQLHDPYCGYGVPDKIDAHDPMTPPNISPSFHL LRTSRFTLHPDFRVDFDDGSTGVWTLVYDEGLHFEVTTPQSRRFFAFFKYEVAPDGRNLA WSYCHTTLVGWWDRVPQGDAVRQSLEPTPPAYDVPELVVPETPADQLLHSLKRGCWWGRK VGEDLSVPTNEVPKERRTPLDVPIWPTSLPPDIQSVAAVVRKSLSTDAPWEPVEDDYIEI RGRKLRSIQEVWENAGNQPLLMSRQHIEGRRATVKASLPLHVLSGVQPFGSPAGSEPPWR TIREFDWSNEEHVALRIGRRRSVVPDAPNQGRCGSCYAISTGTVLTSRLWIRYAANDDVF GKINVSAFQGTSCNVYNQGCGGGYVFLALKFGQEHGFRTEECVQEYTREAHHRSSPLSPS LQTCHDLGGQLGTSAYGCRAPPARSSLPESCSVSIKVASWQYVGGVYGGCSEDAMLRTLW EHGPMAASIEPTVAFTVYRKGVFKSAYNSLVQKGENWVWEKVDHAVVVVGWGWARHGDKW LPYWKVRNSWGARWGEGGYARVIRGVNEMAIERVAVVGEVSLFRDGKHIPPTPAKEPTTS QLAANSSTEPSGNREFSVETLPTLRGVTVMRAARTHQPSEDDREAGESESEAASEQAGAP EDADESRIDAKFAAPQPSFLSQSVKRHRT

  • title: active site
  • coordinates: Q390,C396,H584,N608
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_007010368 SEFDWSNEEH0.994unspNCLIV_007010368 SEFDWSNEEH0.994unspNCLIV_007010368 SEFDWSNEEH0.994unspNCLIV_007010382 SGRRRSVVPD0.996unspNCLIV_007010475 SHHRSSPLSP0.993unspNCLIV_007010478 SSSPLSPSLQ0.995unspNCLIV_007010506 SPARSSLPES0.992unspNCLIV_007010677 SNREFSVETL0.994unspNCLIV_007010699 STHQPSEDDR0.996unspNCLIV_007010708 SEAGESESEA0.995unspNCLIV_007010726 SDADESRIDA0.996unspNCLIV_007010743 SFLSQSVKRH0.992unspNCLIV_007010204 SAVRQSLEPT0.995unspNCLIV_007010230 SQLLHSLKRG0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India