NCLIV_008960 | hypothetical protein

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  • Computed_GO_Function_IDs:        

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  • Computed_GO_Process_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_008960OTHER0.9990430.0009000.000056
No Results

  • Fasta :-

    >NCLIV_008960 MESEIGSGEAANPAASVLLAIVGFAARTTWVGGLILLCMVVLVWYFQEKLLFYPGVPQGF ETPDKNPKGLRSPAERGLPFEELWLRTVDGVKLHCWLIKQKLPQVSAHAPTLIFFHGNAG NVGFRLPNVELLYKHVGVNVLIVSYRGYGFSEGSPTEAGVYRDAEAALDMLVERQEELQI DAKRIFLFGRSLGGAVAIDLAVQKPHQVRGVIVENTFTSLLDMVLIVFPLLRPFQRIVKV LQRLYMDNGEKVQRLRLPILFISGQKDELVPTRHMKRLFELCASPLKEKEDVPLGAHNDT WEWAIGGKSYYDRIAAFIQHALQFDYQPSRQQSDDARLQRRPSSPDAPAIPSPSKSGVPA QAEKEDMHGLPLSVTPMDAAVMPSSASDSLLPKGTAEEENPPSKNLSCSPTSLDLPTASV AAREVVAAAASAASSAAAKAASAFSPVAAGVPGSATGAERGGEGSETFGAVQRDGANGGL RHRAVGATCEGSECGKEDL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_008960.fa Sequence name : NCLIV_008960 Sequence length : 499 VALUES OF COMPUTED PARAMETERS Coef20 : 3.641 CoefTot : 0.000 ChDiff : -6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.288 2.341 0.406 0.892 MesoH : 0.012 0.638 -0.191 0.337 MuHd_075 : 13.657 11.143 3.824 2.778 MuHd_095 : 12.292 8.836 4.159 2.238 MuHd_100 : 16.070 10.696 4.933 2.197 MuHd_105 : 18.129 14.705 5.094 3.479 Hmax_075 : 14.350 13.300 2.413 5.110 Hmax_095 : 10.400 9.400 1.453 3.237 Hmax_100 : 11.400 11.800 1.907 3.700 Hmax_105 : 7.933 9.200 0.726 3.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9759 0.0241 DFMC : 0.9709 0.0291
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 499 NCLIV_008960 MESEIGSGEAANPAASVLLAIVGFAARTTWVGGLILLCMVVLVWYFQEKLLFYPGVPQGFETPDKNPKGLRSPAERGLPF 80 EELWLRTVDGVKLHCWLIKQKLPQVSAHAPTLIFFHGNAGNVGFRLPNVELLYKHVGVNVLIVSYRGYGFSEGSPTEAGV 160 YRDAEAALDMLVERQEELQIDAKRIFLFGRSLGGAVAIDLAVQKPHQVRGVIVENTFTSLLDMVLIVFPLLRPFQRIVKV 240 LQRLYMDNGEKVQRLRLPILFISGQKDELVPTRHMKRLFELCASPLKEKEDVPLGAHNDTWEWAIGGKSYYDRIAAFIQH 320 ALQFDYQPSRQQSDDARLQRRPSSPDAPAIPSPSKSGVPAQAEKEDMHGLPLSVTPMDAAVMPSSASDSLLPKGTAEEEN 400 PPSKNLSCSPTSLDLPTASVAAREVVAAAASAASSAAAKAASAFSPVAAGVPGSATGAERGGEGSETFGAVQRDGANGGL 480 RHRAVGATCEGSECGKEDL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_008960 27 IVGFAAR|TT 0.098 . NCLIV_008960 49 VWYFQEK|LL 0.062 . NCLIV_008960 65 GFETPDK|NP 0.055 . NCLIV_008960 68 TPDKNPK|GL 0.066 . NCLIV_008960 71 KNPKGLR|SP 0.098 . NCLIV_008960 76 LRSPAER|GL 0.144 . NCLIV_008960 86 FEELWLR|TV 0.100 . NCLIV_008960 92 RTVDGVK|LH 0.057 . NCLIV_008960 99 LHCWLIK|QK 0.069 . NCLIV_008960 101 CWLIKQK|LP 0.059 . NCLIV_008960 125 AGNVGFR|LP 0.079 . NCLIV_008960 134 NVELLYK|HV 0.076 . NCLIV_008960 146 VLIVSYR|GY 0.157 . NCLIV_008960 162 TEAGVYR|DA 0.331 . NCLIV_008960 174 LDMLVER|QE 0.096 . NCLIV_008960 183 ELQIDAK|RI 0.065 . NCLIV_008960 184 LQIDAKR|IF 0.145 . NCLIV_008960 190 RIFLFGR|SL 0.206 . NCLIV_008960 204 IDLAVQK|PH 0.059 . NCLIV_008960 209 QKPHQVR|GV 0.144 . NCLIV_008960 232 IVFPLLR|PF 0.082 . NCLIV_008960 236 LLRPFQR|IV 0.132 . NCLIV_008960 239 PFQRIVK|VL 0.086 . NCLIV_008960 243 IVKVLQR|LY 0.085 . NCLIV_008960 251 YMDNGEK|VQ 0.053 . NCLIV_008960 254 NGEKVQR|LR 0.083 . NCLIV_008960 256 EKVQRLR|LP 0.071 . NCLIV_008960 266 LFISGQK|DE 0.056 . NCLIV_008960 273 DELVPTR|HM 0.077 . NCLIV_008960 276 VPTRHMK|RL 0.134 . NCLIV_008960 277 PTRHMKR|LF 0.131 . NCLIV_008960 287 LCASPLK|EK 0.064 . NCLIV_008960 289 ASPLKEK|ED 0.059 . NCLIV_008960 308 EWAIGGK|SY 0.083 . NCLIV_008960 313 GKSYYDR|IA 0.174 . NCLIV_008960 330 FDYQPSR|QQ 0.086 . NCLIV_008960 337 QQSDDAR|LQ 0.076 . NCLIV_008960 340 DDARLQR|RP 0.146 . NCLIV_008960 341 DARLQRR|PS 0.157 . NCLIV_008960 355 AIPSPSK|SG 0.071 . NCLIV_008960 364 VPAQAEK|ED 0.071 . NCLIV_008960 393 SDSLLPK|GT 0.084 . NCLIV_008960 404 EENPPSK|NL 0.075 . NCLIV_008960 423 TASVAAR|EV 0.220 . NCLIV_008960 439 ASSAAAK|AA 0.101 . NCLIV_008960 460 SATGAER|GG 0.113 . NCLIV_008960 473 TFGAVQR|DG 0.111 . NCLIV_008960 481 GANGGLR|HR 0.089 . NCLIV_008960 483 NGGLRHR|AV 0.138 . NCLIV_008960 496 EGSECGK|ED 0.061 . ____________________________^_________________

  • Fasta :-

    >NCLIV_008960 ATGGAGAGCGAGATTGGTTCCGGGGAAGCGGCGAACCCTGCCGCGTCCGTACTCTTGGCT ATTGTTGGGTTTGCCGCTCGGACTACCTGGGTAGGAGGGCTGATACTGCTCTGTATGGTA GTGCTTGTCTGGTACTTTCAAGAAAAATTACTCTTCTATCCGGGTGTGCCTCAAGGGTTT GAAACACCAGATAAGAATCCTAAAGGACTCCGCAGCCCTGCCGAGCGAGGTTTGCCCTTC GAGGAGCTATGGCTAAGGACGGTTGATGGTGTGAAACTTCATTGCTGGCTCATCAAACAG AAGCTACCACAAGTTTCGGCTCATGCACCGACTTTGATCTTCTTCCACGGGAACGCCGGC AATGTGGGGTTTCGGCTGCCAAATGTCGAACTTCTGTATAAGCACGTCGGCGTAAACGTC TTGATTGTCTCGTACCGAGGGTATGGATTCAGCGAAGGATCTCCGACCGAGGCTGGCGTC TACAGAGACGCAGAAGCAGCACTGGATATGTTAGTTGAGAGGCAAGAAGAGCTACAAATC GATGCGAAAAGGATCTTCCTTTTTGGACGGAGTCTTGGTGGCGCCGTGGCGATCGACTTA GCGGTGCAGAAGCCTCACCAGGTTCGAGGCGTCATTGTGGAGAACACCTTCACTTCGCTG CTGGACATGGTCTTGATCGTTTTTCCGCTTCTTCGGCCGTTTCAGCGCATTGTGAAAGTT TTGCAGAGACTGTACATGGACAATGGGGAAAAAGTCCAGAGGCTCCGACTGCCAATCTTA TTCATCAGCGGACAGAAAGATGAGCTAGTGCCCACCCGGCACATGAAAAGACTTTTTGAA CTCTGCGCTTCTCCACTCAAGGAGAAAGAAGACGTGCCTCTTGGCGCGCACAACGACACT TGGGAGTGGGCGATTGGCGGTAAAAGCTACTACGACCGCATCGCAGCCTTCATTCAGCAT GCGCTCCAATTCGACTACCAGCCGTCCCGGCAGCAAAGTGACGACGCACGTCTTCAGCGT CGCCCCTCCTCACCGGACGCTCCGGCCATTCCGTCACCCTCGAAATCCGGGGTACCGGCG CAAGCGGAGAAGGAGGATATGCACGGTCTCCCGCTCTCTGTCACGCCGATGGATGCGGCA GTCATGCCTTCGAGTGCGTCCGACTCCCTGCTTCCAAAAGGCACGGCTGAGGAAGAGAAC CCGCCATCCAAAAATCTCTCGTGCTCACCCACCTCTCTCGACTTGCCGACTGCATCAGTA GCTGCGCGTGAAGTTGTCGCTGCGGCTGCCTCTGCCGCCTCCTCTGCAGCCGCGAAAGCT GCGTCTGCCTTCTCTCCAGTCGCGGCAGGGGTTCCTGGGTCGGCAACCGGAGCAGAGCGG GGCGGTGAAGGAAGTGAAACGTTCGGCGCAGTTCAACGAGACGGGGCGAATGGCGGCTTG CGCCATCGGGCCGTGGGCGCGACTTGTGAAGGGTCTGAATGCGGAAAAGAAGACCTGTGA
  • Download Fasta

  • Fasta :-

    MESEIGSGEAANPAASVLLAIVGFAARTTWVGGLILLCMVVLVWYFQEKLLFYPGVPQGF ETPDKNPKGLRSPAERGLPFEELWLRTVDGVKLHCWLIKQKLPQVSAHAPTLIFFHGNAG NVGFRLPNVELLYKHVGVNVLIVSYRGYGFSEGSPTEAGVYRDAEAALDMLVERQEELQI DAKRIFLFGRSLGGAVAIDLAVQKPHQVRGVIVENTFTSLLDMVLIVFPLLRPFQRIVKV LQRLYMDNGEKVQRLRLPILFISGQKDELVPTRHMKRLFELCASPLKEKEDVPLGAHNDT WEWAIGGKSYYDRIAAFIQHALQFDYQPSRQQSDDARLQRRPSSPDAPAIPSPSKSGVPA QAEKEDMHGLPLSVTPMDAAVMPSSASDSLLPKGTAEEENPPSKNLSCSPTSLDLPTASV AAREVVAAAASAASSAAAKAASAFSPVAAGVPGSATGAERGGEGSETFGAVQRDGANGGL RHRAVGATCEGSECGKEDL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_008960343 SQRRPSSPDA0.998unspNCLIV_008960344 SRRPSSPDAP0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India