NCLIV_009170 | proteasome (Prosome, macropain) subunit, beta type, 1, related

_IDPredictionOTHERSPmTPCS_Position
NCLIV_009170OTHER0.9865750.0056780.007747
No Results

  • Fasta :-

    >NCLIV_009170 METVIGIRGRTFALVACDRYANSSILRMKDDEDKLMLVDDNKVMGLAGQIGDRLQFGDYI QKNIHLYRFRNNKKLSCAATASFTRQQLAYYLRRSPYHVDVMLAGYDEMGPHLYWMDYLA SMASVNKGAHGYAAYFLGGLLDRYYHPELTEEEALKIIEMCKKELMTRFVISQASFRVKI ATKDGIRTLDI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_009170.fa Sequence name : NCLIV_009170 Sequence length : 191 VALUES OF COMPUTED PARAMETERS Coef20 : 4.447 CoefTot : -0.059 ChDiff : 3 ZoneTo : 17 KR : 2 DE : 1 CleavSite : 20 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.700 1.018 -0.052 0.425 MesoH : -0.643 0.027 -0.432 0.188 MuHd_075 : 12.724 5.600 1.865 2.142 MuHd_095 : 19.627 12.463 4.020 3.533 MuHd_100 : 9.874 8.600 0.852 2.717 MuHd_105 : 4.492 6.199 2.820 1.180 Hmax_075 : 6.825 13.767 1.106 4.433 Hmax_095 : 7.175 14.900 1.393 3.946 Hmax_100 : 6.200 14.900 1.189 4.220 Hmax_105 : 5.900 12.700 1.871 4.737 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9348 0.0652 DFMC : 0.9460 0.0540
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 191 NCLIV_009170 METVIGIRGRTFALVACDRYANSSILRMKDDEDKLMLVDDNKVMGLAGQIGDRLQFGDYIQKNIHLYRFRNNKKLSCAAT 80 ASFTRQQLAYYLRRSPYHVDVMLAGYDEMGPHLYWMDYLASMASVNKGAHGYAAYFLGGLLDRYYHPELTEEEALKIIEM 160 CKKELMTRFVISQASFRVKIATKDGIRTLDI 240 ................................................................................ 80 ................................................................................ 160 ............................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_009170 8 ETVIGIR|GR 0.075 . NCLIV_009170 10 VIGIRGR|TF 0.080 . NCLIV_009170 19 ALVACDR|YA 0.096 . NCLIV_009170 27 ANSSILR|MK 0.118 . NCLIV_009170 29 SSILRMK|DD 0.104 . NCLIV_009170 34 MKDDEDK|LM 0.056 . NCLIV_009170 42 MLVDDNK|VM 0.063 . NCLIV_009170 53 AGQIGDR|LQ 0.071 . NCLIV_009170 62 FGDYIQK|NI 0.056 . NCLIV_009170 68 KNIHLYR|FR 0.097 . NCLIV_009170 70 IHLYRFR|NN 0.073 . NCLIV_009170 73 YRFRNNK|KL 0.158 . NCLIV_009170 74 RFRNNKK|LS 0.111 . NCLIV_009170 85 ATASFTR|QQ 0.074 . NCLIV_009170 93 QLAYYLR|RS 0.077 . NCLIV_009170 94 LAYYLRR|SP 0.195 . NCLIV_009170 127 SMASVNK|GA 0.086 . NCLIV_009170 143 LGGLLDR|YY 0.109 . NCLIV_009170 156 TEEEALK|II 0.070 . NCLIV_009170 162 KIIEMCK|KE 0.055 . NCLIV_009170 163 IIEMCKK|EL 0.096 . NCLIV_009170 168 KKELMTR|FV 0.120 . NCLIV_009170 177 ISQASFR|VK 0.093 . NCLIV_009170 179 QASFRVK|IA 0.083 . NCLIV_009170 183 RVKIATK|DG 0.068 . NCLIV_009170 187 ATKDGIR|TL 0.078 . ____________________________^_________________

  • Fasta :-

    >NCLIV_009170 ATGGAGACCGTGATCGGCATCCGGGGGCGCACCTTCGCTCTGGTCGCATGTGACCGGTAC GCGAATTCGAGCATTCTTCGCATGAAGGACGACGAAGACAAACTGATGTTGGTTGACGAC AACAAGGTGATGGGCTTGGCGGGCCAGATCGGGGACCGCCTCCAGTTCGGCGACTACATC CAGAAAAACATTCACCTCTACCGATTTCGAAACAACAAGAAGCTGAGTTGCGCGGCAACC GCCAGCTTCACGCGCCAGCAACTCGCCTACTACCTGCGGCGAAGCCCGTACCACGTCGAC GTCATGCTCGCAGGCTACGACGAGATGGGGCCGCACCTGTACTGGATGGACTACCTGGCC TCGATGGCGTCGGTGAACAAGGGAGCGCACGGCTACGCGGCCTACTTTTTGGGTGGTCTC TTGGACCGATACTACCATCCGGAGTTGACGGAAGAAGAGGCGCTGAAAATCATCGAAATG TGCAAGAAAGAGCTTATGACGCGATTCGTCATTTCCCAAGCGTCGTTCCGAGTTAAAATT GCAACCAAGGACGGAATCCGAACCCTCGATATCTAA
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  • Fasta :-

    METVIGIRGRTFALVACDRYANSSILRMKDDEDKLMLVDDNKVMGLAGQIGDRLQFGDYI QKNIHLYRFRNNKKLSCAATASFTRQQLAYYLRRSPYHVDVMLAGYDEMGPHLYWMDYLA SMASVNKGAHGYAAYFLGGLLDRYYHPELTEEEALKIIEMCKKELMTRFVISQASFRVKI ATKDGIRTLDI

    No Results
No Results
No Results
IDSitePeptideScoreMethod
NCLIV_00917095 SYLRRSPYHV0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India