NCLIV_012070 | peptidase C26, related

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_012070OTHER0.9999310.0000390.000030
No Results

  • Fasta :-

    >NCLIV_012070 MIPSGSSAKASPREDITKVVDSKQVTVQVSESGELVAEQDAPLSPDDFVRILVVTRRWLR KGRLTGYVSELHLEMLQSHNAVPVMVPRTPWTRAMLDGFMPMHGLLLVEGEDIGQSLDPY RGTASVDQVQKLEVQSMHPGEVTSDEERDAIELELLQRCHRDGIPILGICRGCQLINIFR GGSLYYDIGLQVGKGVQHINYSNYDASEAGAEQEPRHGLTTETQANEMATTTCAPAGLAQ RCADNSSYSGPQMDKGDVFFSLQVNSYHHQGVRQLGEGLVPIAYSEDGLVEAYCDAGMMA SESRRAGADPTGGSWKDAERSTGQPRRHFVLGLQCGRVNIVS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_012070.fa Sequence name : NCLIV_012070 Sequence length : 342 VALUES OF COMPUTED PARAMETERS Coef20 : 3.890 CoefTot : -0.004 ChDiff : -14 ZoneTo : 13 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.688 1.388 0.213 0.515 MesoH : -0.789 0.131 -0.433 0.137 MuHd_075 : 37.865 19.655 10.371 7.363 MuHd_095 : 15.385 9.744 4.329 2.989 MuHd_100 : 10.549 11.401 3.473 3.327 MuHd_105 : 1.221 7.521 2.025 2.312 Hmax_075 : 10.850 6.100 1.105 3.430 Hmax_095 : 0.700 1.900 -1.339 2.180 Hmax_100 : 3.200 6.800 -0.942 3.160 Hmax_105 : -1.400 2.683 -1.708 2.007 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9011 0.0989 DFMC : 0.9181 0.0819
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 342 NCLIV_012070 MIPSGSSAKASPREDITKVVDSKQVTVQVSESGELVAEQDAPLSPDDFVRILVVTRRWLRKGRLTGYVSELHLEMLQSHN 80 AVPVMVPRTPWTRAMLDGFMPMHGLLLVEGEDIGQSLDPYRGTASVDQVQKLEVQSMHPGEVTSDEERDAIELELLQRCH 160 RDGIPILGICRGCQLINIFRGGSLYYDIGLQVGKGVQHINYSNYDASEAGAEQEPRHGLTTETQANEMATTTCAPAGLAQ 240 RCADNSSYSGPQMDKGDVFFSLQVNSYHHQGVRQLGEGLVPIAYSEDGLVEAYCDAGMMASESRRAGADPTGGSWKDAER 320 STGQPRRHFVLGLQCGRVNIVS 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ...................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_012070 9 PSGSSAK|AS 0.068 . NCLIV_012070 13 SAKASPR|ED 0.105 . NCLIV_012070 18 PREDITK|VV 0.097 . NCLIV_012070 23 TKVVDSK|QV 0.088 . NCLIV_012070 50 SPDDFVR|IL 0.106 . NCLIV_012070 56 RILVVTR|RW 0.078 . NCLIV_012070 57 ILVVTRR|WL 0.226 . NCLIV_012070 60 VTRRWLR|KG 0.126 . NCLIV_012070 61 TRRWLRK|GR 0.121 . NCLIV_012070 63 RWLRKGR|LT 0.304 . NCLIV_012070 88 VPVMVPR|TP 0.082 . NCLIV_012070 93 PRTPWTR|AM 0.100 . NCLIV_012070 121 QSLDPYR|GT 0.097 . NCLIV_012070 131 SVDQVQK|LE 0.059 . NCLIV_012070 148 VTSDEER|DA 0.132 . NCLIV_012070 158 ELELLQR|CH 0.088 . NCLIV_012070 161 LLQRCHR|DG 0.306 . NCLIV_012070 171 PILGICR|GC 0.066 . NCLIV_012070 180 QLINIFR|GG 0.082 . NCLIV_012070 194 IGLQVGK|GV 0.078 . NCLIV_012070 216 GAEQEPR|HG 0.100 . NCLIV_012070 241 PAGLAQR|CA 0.098 . NCLIV_012070 255 SGPQMDK|GD 0.055 . NCLIV_012070 273 YHHQGVR|QL 0.125 . NCLIV_012070 304 MMASESR|RA 0.124 . NCLIV_012070 305 MASESRR|AG 0.166 . NCLIV_012070 316 PTGGSWK|DA 0.112 . NCLIV_012070 320 SWKDAER|ST 0.193 . NCLIV_012070 326 RSTGQPR|RH 0.087 . NCLIV_012070 327 STGQPRR|HF 0.167 . NCLIV_012070 337 LGLQCGR|VN 0.070 . ____________________________^_________________

  • Fasta :-

    >NCLIV_012070 ATGATTCCTTCCGGAAGCAGTGCCAAGGCCTCTCCGCGGGAAGATATCACGAAGGTCGTG GACAGCAAACAGGTGACAGTTCAGGTGTCAGAGTCTGGCGAACTGGTGGCAGAGCAAGAT GCGCCGCTGTCACCTGACGATTTCGTGCGTATCCTCGTGGTAACTCGGAGATGGCTGCGC AAAGGTCGCCTCACCGGATATGTTAGTGAACTGCATCTGGAAATGTTGCAGAGTCACAAT GCCGTGCCGGTGATGGTTCCTCGAACTCCGTGGACGCGCGCCATGCTGGACGGTTTCATG CCAATGCATGGCTTGTTGTTGGTTGAAGGCGAAGATATCGGCCAGTCACTTGATCCGTAC AGGGGCACTGCGTCAGTGGATCAAGTGCAGAAGCTTGAGGTACAGTCGATGCACCCTGGG GAGGTCACGTCCGACGAGGAGCGGGACGCGATTGAGTTGGAGCTTCTTCAGCGTTGTCAC AGGGACGGCATACCCATTTTAGGAATTTGCAGGGGGTGCCAGCTTATCAACATATTTCGT GGCGGCTCACTGTACTACGACATTGGTCTACAAGTCGGCAAGGGCGTTCAGCATATCAAC TACAGCAACTACGATGCGTCAGAGGCAGGTGCTGAGCAAGAACCGCGTCACGGTCTCACC ACGGAAACCCAGGCCAATGAGATGGCCACGACAACCTGTGCACCCGCCGGTTTGGCTCAG AGATGCGCCGACAACAGTTCCTATTCCGGTCCTCAAATGGACAAGGGTGACGTCTTTTTC AGTTTGCAAGTGAACTCGTACCACCACCAAGGAGTGCGCCAGTTAGGCGAGGGCTTGGTT CCGATTGCCTATTCTGAAGACGGTCTAGTTGAAGCTTATTGTGACGCTGGCATGATGGCA TCTGAAAGCCGGCGAGCGGGAGCGGACCCGACAGGTGGAAGCTGGAAGGATGCCGAACGC AGTACCGGGCAGCCCCGAAGACATTTTGTGCTTGGTCTTCAGTGTGGACGCGTTAATATC GTCTCGTAA
  • Download Fasta

  • Fasta :-

    MIPSGSSAKASPREDITKVVDSKQVTVQVSESGELVAEQDAPLSPDDFVRILVVTRRWLR KGRLTGYVSELHLEMLQSHNAVPVMVPRTPWTRAMLDGFMPMHGLLLVEGEDIGQSLDPY RGTASVDQVQKLEVQSMHPGEVTSDEERDAIELELLQRCHRDGIPILGICRGCQLINIFR GGSLYYDIGLQVGKGVQHINYSNYDASEAGAEQEPRHGLTTETQANEMATTTCAPAGLAQ RCADNSSYSGPQMDKGDVFFSLQVNSYHHQGVRQLGEGLVPIAYSEDGLVEAYCDAGMMA SESRRAGADPTGGSWKDAERSTGQPRRHFVLGLQCGRVNIVS

  • title: conserved cys residue
  • coordinates: C170
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_01207044 SDAPLSPDDF0.995unspNCLIV_01207044 SDAPLSPDDF0.995unspNCLIV_01207044 SDAPLSPDDF0.995unspNCLIV_012070144 SGEVTSDEER0.994unspNCLIV_012070314 SPTGGSWKDA0.998unspNCLIV_0120707 SPSGSSAKAS0.993unspNCLIV_01207011 SSAKASPRED0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India