NCLIV_012110 | hypothetical protein

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_012110OTHER0.9999710.0000090.000021
No Results

  • Fasta :-

    >NCLIV_012110 MEPRTAENCRHSCTVKPKATTVSSASAEINDETDSAFPLLDAADEEERNFGRDLADAHCV TTPATTCGTPPVAEAAGTASVYSASTPEADDFFEGGLDIPDEMSPGERVSARATPPGGSP TDCCGARTEEMIFGRLAALHAKERELSLNLSPLQGGTTEPDPQPLVKEVKFAHDVLKPPK VILPPDWLPFVAPDLCCRRRLAETLNMPAKNLTMVPQPQLSFYDAEVVQKRCVAPDGNCQ FRSVSYALLGTEEAHIELRRQVAQYLKDNFSRLSWLINPDRLQEEDWRMAKLDKKYKVRV PYKGSRKYPVVDADELKRNWVIRLGDVRYRIWGDECTLAVIAEMYNICIVVEQQEQDGRR ATQMGSHAIEVIRPYDVSSDYRLPTIFLIFEIRQQHYNVVERVKRR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_012110.fa Sequence name : NCLIV_012110 Sequence length : 406 VALUES OF COMPUTED PARAMETERS Coef20 : 3.888 CoefTot : 0.000 ChDiff : -10 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.024 1.641 0.155 0.530 MesoH : -0.681 0.040 -0.315 0.114 MuHd_075 : 12.028 12.114 6.363 2.275 MuHd_095 : 20.107 10.553 8.158 2.418 MuHd_100 : 20.322 12.045 8.303 3.233 MuHd_105 : 18.827 12.578 8.029 3.651 Hmax_075 : -2.217 3.150 -0.294 -0.280 Hmax_095 : -4.025 -0.875 -1.496 -0.289 Hmax_100 : -3.800 -0.300 -1.761 -0.480 Hmax_105 : -3.200 0.100 -1.761 0.280 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9972 0.0028 DFMC : 0.9922 0.0078
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 406 NCLIV_012110 MEPRTAENCRHSCTVKPKATTVSSASAEINDETDSAFPLLDAADEEERNFGRDLADAHCVTTPATTCGTPPVAEAAGTAS 80 VYSASTPEADDFFEGGLDIPDEMSPGERVSARATPPGGSPTDCCGARTEEMIFGRLAALHAKERELSLNLSPLQGGTTEP 160 DPQPLVKEVKFAHDVLKPPKVILPPDWLPFVAPDLCCRRRLAETLNMPAKNLTMVPQPQLSFYDAEVVQKRCVAPDGNCQ 240 FRSVSYALLGTEEAHIELRRQVAQYLKDNFSRLSWLINPDRLQEEDWRMAKLDKKYKVRVPYKGSRKYPVVDADELKRNW 320 VIRLGDVRYRIWGDECTLAVIAEMYNICIVVEQQEQDGRRATQMGSHAIEVIRPYDVSSDYRLPTIFLIFEIRQQHYNVV 400 ERVKRR 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_012110 4 ---MEPR|TA 0.139 . NCLIV_012110 10 RTAENCR|HS 0.119 . NCLIV_012110 16 RHSCTVK|PK 0.070 . NCLIV_012110 18 SCTVKPK|AT 0.078 . NCLIV_012110 48 AADEEER|NF 0.082 . NCLIV_012110 52 EERNFGR|DL 0.138 . NCLIV_012110 108 EMSPGER|VS 0.080 . NCLIV_012110 112 GERVSAR|AT 0.177 . NCLIV_012110 127 TDCCGAR|TE 0.104 . NCLIV_012110 135 EEMIFGR|LA 0.084 . NCLIV_012110 142 LAALHAK|ER 0.071 . NCLIV_012110 144 ALHAKER|EL 0.099 . NCLIV_012110 167 DPQPLVK|EV 0.082 . NCLIV_012110 170 PLVKEVK|FA 0.101 . NCLIV_012110 177 FAHDVLK|PP 0.070 . NCLIV_012110 180 DVLKPPK|VI 0.056 . NCLIV_012110 198 APDLCCR|RR 0.068 . NCLIV_012110 199 PDLCCRR|RL 0.105 . NCLIV_012110 200 DLCCRRR|LA 0.155 . NCLIV_012110 210 TLNMPAK|NL 0.081 . NCLIV_012110 230 DAEVVQK|RC 0.056 . NCLIV_012110 231 AEVVQKR|CV 0.287 . NCLIV_012110 242 DGNCQFR|SV 0.312 . NCLIV_012110 259 EAHIELR|RQ 0.071 . NCLIV_012110 260 AHIELRR|QV 0.220 . NCLIV_012110 267 QVAQYLK|DN 0.066 . NCLIV_012110 272 LKDNFSR|LS 0.086 . NCLIV_012110 281 WLINPDR|LQ 0.083 . NCLIV_012110 288 LQEEDWR|MA 0.076 . NCLIV_012110 291 EDWRMAK|LD 0.101 . NCLIV_012110 294 RMAKLDK|KY 0.061 . NCLIV_012110 295 MAKLDKK|YK 0.088 . NCLIV_012110 297 KLDKKYK|VR 0.058 . NCLIV_012110 299 DKKYKVR|VP 0.087 . NCLIV_012110 303 KVRVPYK|GS 0.074 . NCLIV_012110 306 VPYKGSR|KY 0.084 . NCLIV_012110 307 PYKGSRK|YP 0.069 . NCLIV_012110 317 VDADELK|RN 0.062 . NCLIV_012110 318 DADELKR|NW 0.125 . NCLIV_012110 323 KRNWVIR|LG 0.120 . NCLIV_012110 328 IRLGDVR|YR 0.089 . NCLIV_012110 330 LGDVRYR|IW 0.113 . NCLIV_012110 359 QQEQDGR|RA 0.100 . NCLIV_012110 360 QEQDGRR|AT 0.160 . NCLIV_012110 373 HAIEVIR|PY 0.091 . NCLIV_012110 382 DVSSDYR|LP 0.079 . NCLIV_012110 393 FLIFEIR|QQ 0.077 . NCLIV_012110 402 HYNVVER|VK 0.096 . NCLIV_012110 404 NVVERVK|RR 0.058 . NCLIV_012110 405 VVERVKR|R- 0.442 . NCLIV_012110 406 VERVKRR|-- 0.196 . ____________________________^_________________

  • Fasta :-

    >NCLIV_012110 ATGGAACCACGAACCGCAGAGAATTGCAGGCACAGCTGCACAGTGAAGCCTAAGGCGACG ACGGTTTCATCAGCATCAGCAGAAATCAACGACGAAACGGACAGTGCTTTCCCGCTCCTC GATGCAGCGGACGAAGAGGAGCGAAATTTCGGCAGAGACCTCGCGGACGCCCACTGCGTT ACGACCCCTGCTACCACATGTGGAACACCACCCGTAGCGGAAGCTGCAGGTACGGCAAGT GTCTATTCCGCGTCGACACCAGAGGCCGACGACTTCTTTGAAGGAGGCTTGGATATTCCC GACGAGATGTCGCCAGGAGAGCGGGTGTCGGCGAGGGCAACCCCTCCCGGTGGTTCCCCC ACAGATTGCTGTGGAGCGAGAACGGAAGAGATGATCTTCGGTCGACTTGCAGCACTCCAC GCGAAGGAGCGGGAACTTAGCCTAAATCTGAGTCCGCTACAGGGGGGCACCACGGAGCCT GATCCGCAGCCTCTGGTGAAAGAGGTGAAGTTTGCACACGATGTCCTGAAGCCACCTAAA GTCATACTACCTCCTGATTGGTTGCCATTTGTCGCCCCAGATTTGTGTTGTCGTCGTCGA CTTGCCGAAACCCTCAATATGCCAGCCAAAAATTTAACCATGGTCCCGCAGCCGCAGCTG TCATTCTACGACGCGGAGGTTGTGCAGAAGCGCTGCGTTGCCCCTGATGGAAATTGTCAA TTCCGTTCGGTCAGCTACGCCCTGCTTGGCACCGAGGAAGCGCACATTGAACTCCGTCGA CAAGTGGCACAATATCTGAAGGACAACTTCAGCCGACTTTCCTGGCTGATAAACCCGGAC AGGTTGCAGGAAGAGGACTGGAGAATGGCTAAACTCGACAAGAAATATAAAGTTAGAGTT CCGTATAAGGGCTCCAGAAAATATCCCGTAGTGGACGCAGATGAACTCAAAAGGAACTGG GTTATCAGACTTGGAGACGTGAGATACCGGATTTGGGGAGACGAGTGCACTCTCGCAGTC ATTGCTGAGATGTACAATATCTGTATCGTTGTTGAGCAACAGGAGCAGGACGGACGTCGT GCCACGCAGATGGGATCACATGCAATAGAGGTGATCAGACCTTACGATGTCTCGAGTGAT TATCGCCTTCCAACAATATTCCTGATCTTCGAGATTCGGCAACAGCATTACAACGTTGTG GAGAGGGTGAAACGAAGGTGA
  • Download Fasta

  • Fasta :-

    MEPRTAENCRHSCTVKPKATTVSSASAEINDETDSAFPLLDAADEEERNFGRDLADAHCV TTPATTCGTPPVAEAAGTASVYSASTPEADDFFEGGLDIPDEMSPGERVSARATPPGGSP TDCCGARTEEMIFGRLAALHAKERELSLNLSPLQGGTTEPDPQPLVKEVKFAHDVLKPPK VILPPDWLPFVAPDLCCRRRLAETLNMPAKNLTMVPQPQLSFYDAEVVQKRCVAPDGNCQ FRSVSYALLGTEEAHIELRRQVAQYLKDNFSRLSWLINPDRLQEEDWRMAKLDKKYKVRV PYKGSRKYPVVDADELKRNWVIRLGDVRYRIWGDECTLAVIAEMYNICIVVEQQEQDGRR ATQMGSHAIEVIRPYDVSSDYRLPTIFLIFEIRQQHYNVVERVKRR

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_012110110 SGERVSARAT0.995unspNCLIV_012110110 SGERVSARAT0.995unspNCLIV_012110110 SGERVSARAT0.995unspNCLIV_012110119 SPPGGSPTDC0.993unspNCLIV_012110221 SQPQLSFYDA0.996unspNCLIV_01211026 SVSSASAEIN0.992unspNCLIV_012110104 SPDEMSPGER0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India