NCLIV_014700 | conserved hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_014700OTHER0.9999820.0000030.000015
No Results

  • Fasta :-

    >NCLIV_014700 MYWPMELFSAEKSVHLDWTLSTCCERGQWITSGIVLAWLAVAVLLWHCEIWGYNVLLPMK MLTVFFHEFGHATAAWLTCGRVHGIEVHTNEGGVTKTTGGARGIILPAGYLGSCLWGMFF LLMASINIWTLRVGAGILCFSMLIVLLFFARNWALRVVCLFFVALVIGMWVWTEMEQIVW PLRVVLLGIGVMNGVYSLWDIWDDTIRRKVSESDAYKCADLTHCSSRLCGVLWATFALAF MATSIYLLFVVKEVGDDRFE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_014700.fa Sequence name : NCLIV_014700 Sequence length : 260 VALUES OF COMPUTED PARAMETERS Coef20 : 3.761 CoefTot : -0.410 ChDiff : -3 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.547 2.682 0.563 0.902 MesoH : 1.389 1.735 0.185 0.627 MuHd_075 : 25.254 7.270 6.055 2.370 MuHd_095 : 5.198 2.333 1.914 1.800 MuHd_100 : 7.716 2.099 0.883 2.320 MuHd_105 : 6.451 5.849 2.129 2.625 Hmax_075 : 11.550 6.767 -0.374 3.680 Hmax_095 : 4.900 4.100 -2.068 3.300 Hmax_100 : 4.400 4.400 -2.179 3.820 Hmax_105 : 6.000 6.700 -1.861 4.230 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9874 0.0126 DFMC : 0.9698 0.0302
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 260 NCLIV_014700 MYWPMELFSAEKSVHLDWTLSTCCERGQWITSGIVLAWLAVAVLLWHCEIWGYNVLLPMKMLTVFFHEFGHATAAWLTCG 80 RVHGIEVHTNEGGVTKTTGGARGIILPAGYLGSCLWGMFFLLMASINIWTLRVGAGILCFSMLIVLLFFARNWALRVVCL 160 FFVALVIGMWVWTEMEQIVWPLRVVLLGIGVMNGVYSLWDIWDDTIRRKVSESDAYKCADLTHCSSRLCGVLWATFALAF 240 MATSIYLLFVVKEVGDDRFE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_014700 12 ELFSAEK|SV 0.076 . NCLIV_014700 26 LSTCCER|GQ 0.074 . NCLIV_014700 60 NVLLPMK|ML 0.061 . NCLIV_014700 81 AWLTCGR|VH 0.087 . NCLIV_014700 96 NEGGVTK|TT 0.085 . NCLIV_014700 102 KTTGGAR|GI 0.077 . NCLIV_014700 132 INIWTLR|VG 0.089 . NCLIV_014700 151 VLLFFAR|NW 0.074 . NCLIV_014700 156 ARNWALR|VV 0.126 . NCLIV_014700 183 QIVWPLR|VV 0.096 . NCLIV_014700 207 IWDDTIR|RK 0.066 . NCLIV_014700 208 WDDTIRR|KV 0.162 . NCLIV_014700 209 DDTIRRK|VS 0.066 . NCLIV_014700 217 SESDAYK|CA 0.075 . NCLIV_014700 227 LTHCSSR|LC 0.116 . NCLIV_014700 252 YLLFVVK|EV 0.080 . NCLIV_014700 258 KEVGDDR|FE 0.081 . ____________________________^_________________

  • Fasta :-

    >NCLIV_014700 ATGTACTGGCCTATGGAACTCTTCAGCGCGGAGAAGTCCGTCCATCTGGACTGGACGTTG TCGACATGTTGCGAAAGGGGACAATGGATCACTTCCGGGATCGTCCTGGCGTGGCTTGCC GTCGCAGTGCTTCTTTGGCACTGCGAAATTTGGGGCTACAATGTTCTCCTGCCGATGAAA ATGCTGACTGTCTTCTTCCACGAGTTTGGACACGCCACAGCGGCCTGGCTTACGTGCGGG AGAGTCCACGGCATCGAGGTCCACACCAACGAAGGCGGAGTTACCAAGACAACCGGAGGC GCAAGGGGCATCATCCTCCCAGCGGGCTATCTCGGCTCGTGTCTGTGGGGCATGTTTTTC CTGCTGATGGCGTCGATAAACATCTGGACTCTGCGGGTCGGTGCAGGAATTCTCTGTTTC TCCATGCTGATTGTCCTTTTGTTCTTCGCGCGAAACTGGGCGCTACGCGTCGTCTGCCTC TTCTTCGTCGCTCTGGTCATCGGCATGTGGGTGTGGACGGAAATGGAGCAGATTGTCTGG CCGCTCCGAGTCGTTCTGCTCGGCATCGGCGTCATGAACGGCGTGTACAGCTTGTGGGAT ATCTGGGACGATACCATTCGCAGGAAAGTCAGCGAGAGTGACGCGTACAAATGTGCCGAT CTCACCCACTGCAGCAGCCGTCTGTGCGGCGTCCTCTGGGCCACCTTCGCCCTGGCGTTC ATGGCGACCTCCATCTACCTCCTCTTTGTCGTCAAAGAGGTAGGCGATGATCGCTTCGAA TAA
  • Download Fasta

  • Fasta :-

    MYWPMELFSAEKSVHLDWTLSTCCERGQWITSGIVLAWLAVAVLLWHCEIWGYNVLLPMK MLTVFFHEFGHATAAWLTCGRVHGIEVHTNEGGVTKTTGGARGIILPAGYLGSCLWGMFF LLMASINIWTLRVGAGILCFSMLIVLLFFARNWALRVVCLFFVALVIGMWVWTEMEQIVW PLRVVLLGIGVMNGVYSLWDIWDDTIRRKVSESDAYKCADLTHCSSRLCGVLWATFALAF MATSIYLLFVVKEVGDDRFE

    No Results
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IDSitePeptideScoreMethod
NCLIV_014700211 SRRKVSESDA0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India