NCLIV_015220 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_015220OTHER0.9963540.0033700.000276
No Results

  • Fasta :-

    >NCLIV_015220 MALGGGPGGGSPLLVSAADILAAAVEKRRQDQLAASAAWTADGEPPAAPTSSEPASSRSE SADGGCDTQSVPPPNAVHLHVYDLDPTISKYMNKVMRPLGAGAFHAGVEVYGIEYCYGQT HDKSPGITVNRPRRHPAHIYRETIYMGETALAHEEFVALIEALKDEWPGEKYNILTRNCL NFADQLCLLLGVGCLPPWLLRLQQQASSLQESMQYAARRLQQIDETTGLSAVASAAATAA AAAARAFGGFLRPSLESQEGRSVSSRLDRALTSGISLLSGGLGAFADGVAVGLAGLMDDD DADVPYPDPSYVSTLHCSLPEASLQESPQPSTLPPSTSSPLSSSPARSLSASAAASGASA GERQVQSPDNNGKLFYLYDEADLSPSQLLEEENNNILPDHVVESSVYSLSLTPGAGDSGA A
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_015220.fa Sequence name : NCLIV_015220 Sequence length : 421 VALUES OF COMPUTED PARAMETERS Coef20 : 2.983 CoefTot : -0.993 ChDiff : -23 ZoneTo : 18 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.753 1.776 0.301 0.666 MesoH : -0.093 0.550 -0.170 0.243 MuHd_075 : 2.685 6.903 1.934 2.244 MuHd_095 : 4.569 9.523 1.652 2.275 MuHd_100 : 1.948 7.354 1.210 1.524 MuHd_105 : 2.590 4.266 0.570 0.803 Hmax_075 : 13.767 12.000 2.616 5.360 Hmax_095 : 13.300 14.000 2.616 5.355 Hmax_100 : 13.600 14.200 2.723 5.500 Hmax_105 : 12.600 13.067 2.152 5.273 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9975 0.0025 DFMC : 0.9962 0.0038
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 421 NCLIV_015220 MALGGGPGGGSPLLVSAADILAAAVEKRRQDQLAASAAWTADGEPPAAPTSSEPASSRSESADGGCDTQSVPPPNAVHLH 80 VYDLDPTISKYMNKVMRPLGAGAFHAGVEVYGIEYCYGQTHDKSPGITVNRPRRHPAHIYRETIYMGETALAHEEFVALI 160 EALKDEWPGEKYNILTRNCLNFADQLCLLLGVGCLPPWLLRLQQQASSLQESMQYAARRLQQIDETTGLSAVASAAATAA 240 AAAARAFGGFLRPSLESQEGRSVSSRLDRALTSGISLLSGGLGAFADGVAVGLAGLMDDDDADVPYPDPSYVSTLHCSLP 320 EASLQESPQPSTLPPSTSSPLSSSPARSLSASAAASGASAGERQVQSPDNNGKLFYLYDEADLSPSQLLEEENNNILPDH 400 VVESSVYSLSLTPGAGDSGAA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_015220 27 LAAAVEK|RR 0.067 . NCLIV_015220 28 AAAVEKR|RQ 0.203 . NCLIV_015220 29 AAVEKRR|QD 0.104 . NCLIV_015220 58 SEPASSR|SE 0.139 . NCLIV_015220 90 LDPTISK|YM 0.062 . NCLIV_015220 94 ISKYMNK|VM 0.066 . NCLIV_015220 97 YMNKVMR|PL 0.196 . NCLIV_015220 123 YGQTHDK|SP 0.083 . NCLIV_015220 131 PGITVNR|PR 0.073 . NCLIV_015220 133 ITVNRPR|RH 0.081 . NCLIV_015220 134 TVNRPRR|HP 0.497 . NCLIV_015220 141 HPAHIYR|ET 0.138 . NCLIV_015220 164 ALIEALK|DE 0.070 . NCLIV_015220 171 DEWPGEK|YN 0.058 . NCLIV_015220 177 KYNILTR|NC 0.076 . NCLIV_015220 201 LPPWLLR|LQ 0.070 . NCLIV_015220 218 SMQYAAR|RL 0.109 . NCLIV_015220 219 MQYAARR|LQ 0.154 . NCLIV_015220 245 AAAAAAR|AF 0.143 . NCLIV_015220 252 AFGGFLR|PS 0.085 . NCLIV_015220 261 LESQEGR|SV 0.302 . NCLIV_015220 266 GRSVSSR|LD 0.132 . NCLIV_015220 269 VSSRLDR|AL 0.410 . NCLIV_015220 347 LSSSPAR|SL 0.316 . NCLIV_015220 363 GASAGER|QV 0.120 . NCLIV_015220 373 SPDNNGK|LF 0.061 . ____________________________^_________________

  • Fasta :-

    >NCLIV_015220 ATGGCGCTTGGAGGCGGACCGGGCGGCGGTTCCCCTCTTCTCGTTTCTGCCGCGGACATC CTCGCAGCCGCCGTGGAGAAAAGACGGCAGGACCAGCTAGCGGCGAGTGCTGCGTGGACA GCAGACGGCGAACCGCCCGCTGCTCCCACGTCATCTGAACCGGCGTCTTCTAGAAGTGAA TCGGCTGATGGGGGCTGCGACACACAGTCCGTCCCCCCACCCAACGCAGTGCATCTGCAT GTGTACGATCTCGACCCTACAATCAGCAAATACATGAACAAAGTTATGCGGCCTCTCGGC GCAGGGGCTTTCCACGCAGGAGTTGAGGTGTACGGGATTGAGTACTGCTACGGACAAACG CACGACAAATCTCCAGGTATCACAGTGAATCGCCCTCGTCGGCACCCGGCCCACATCTAC CGAGAAACAATCTATATGGGAGAGACGGCTCTGGCACACGAAGAGTTTGTGGCTCTCATT GAAGCCCTGAAGGATGAATGGCCCGGCGAAAAATACAACATCTTGACGAGGAACTGTCTG AACTTTGCAGATCAGCTATGTCTCCTTCTCGGAGTGGGGTGTCTCCCCCCGTGGCTTCTG CGCCTTCAACAGCAGGCCTCGAGTCTGCAGGAGAGCATGCAGTACGCGGCGCGGAGACTC CAGCAAATCGATGAGACCACAGGCCTCTCTGCTGTGGCGTCGGCGGCAGCCACCGCAGCC GCAGCTGCTGCGCGGGCCTTTGGCGGTTTTCTGCGGCCTTCCTTGGAATCCCAGGAAGGG CGAAGCGTCTCCTCTCGTCTCGATCGCGCCCTAACCTCGGGGATCAGTCTGCTGTCAGGC GGTTTAGGCGCTTTCGCAGACGGCGTGGCTGTAGGTCTCGCTGGCCTGATGGACGACGAT GATGCCGACGTTCCGTATCCTGATCCTAGCTACGTTTCTACCTTGCACTGTTCTCTCCCT GAAGCGTCTCTCCAAGAGTCTCCTCAACCCTCTACCCTCCCTCCTTCCACATCTTCTCCG TTGTCTTCCTCTCCTGCTCGTTCTCTCTCTGCGTCTGCCGCTGCGTCTGGTGCTTCTGCC GGGGAGCGACAGGTGCAGTCTCCTGACAACAATGGCAAGCTGTTTTACCTCTACGACGAA GCGGATCTTTCTCCTTCGCAGCTTCTAGAGGAAGAAAACAATAATATTCTGCCTGACCAC GTGGTGGAGTCCTCTGTGTACTCTCTTTCGCTTACACCTGGAGCTGGAGACAGTGGCGCG GCATAG
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  • Fasta :-

    MALGGGPGGGSPLLVSAADILAAAVEKRRQDQLAASAAWTADGEPPAAPTSSEPASSRSE SADGGCDTQSVPPPNAVHLHVYDLDPTISKYMNKVMRPLGAGAFHAGVEVYGIEYCYGQT HDKSPGITVNRPRRHPAHIYRETIYMGETALAHEEFVALIEALKDEWPGEKYNILTRNCL NFADQLCLLLGVGCLPPWLLRLQQQASSLQESMQYAARRLQQIDETTGLSAVASAAATAA AAAARAFGGFLRPSLESQEGRSVSSRLDRALTSGISLLSGGLGAFADGVAVGLAGLMDDD DADVPYPDPSYVSTLHCSLPEASLQESPQPSTLPPSTSSPLSSSPARSLSASAAASGASA GERQVQSPDNNGKLFYLYDEADLSPSQLLEEENNNILPDHVVESSVYSLSLTPGAGDSGA A

    No Results
    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_01522061 SSRSESADGG0.994unspNCLIV_01522061 SSRSESADGG0.994unspNCLIV_01522061 SSRSESADGG0.994unspNCLIV_015220254 SFLRPSLESQ0.995unspNCLIV_015220342 SSSPLSSSPA0.995unspNCLIV_01522056 SSEPASSRSE0.991unspNCLIV_01522057 SEPASSRSES0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India