NCLIV_018100 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      GO:0008242      

  • Computed_GO_Functions:  hydrolase activity      omega peptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_018100SP0.0118560.9855920.002552CS pos: 18-19. GMQ-FL. Pr: 0.3589
No Results

  • Fasta :-

    >NCLIV_018100 MVFRALLLLCLLWPPGMQFLNNCAPAYCSVGSAEAGGAPPWRHESEARGAEQPDVDEAKF VAFPSEQRSIERIARRDPEARTTGQGVPKERAKELCAQANNVPACVQQQLNEPVARRAGR KRAAVIGVLAQGPVSPAVMGPNGHPPEDGDRLPEDGGPSYVAASYVKFIEASGSKAIPVP AFATEEEYRRVFDSLDGLILPGGEAAIDRANAAYYRATKLLLDWAKEANDAGRYFPVVGI CLGFEAMLIWGSEGRFDYFSVDDYRNVDRARRLKLLPDAFQSRLFGGPGFPWSQERPSLS ASYEGPPDSSVDKEATSPARGGATLVPESDARFNAVNPMGLSEGSAGDFRGDRGRAPTRR LLFLHRERTGSPGREPSSSDIPLFSGEGNREFGHDTDDDDALEQVTNSKRVASLLQEQPA SYFHHHRRMTRVEFETDPHLKTKFQLVASALVGDGTNPDGSDEIVAIVEAKGYPFYGFQS HPEKPLFEHCPFAQVPHDMVSRMISLYVAAFLGSEANQSDHPVEPLEKEWYHLFERYPVY STSSPDQNYVFEQVHVFPAILRGEYSAVHRVFGRSVVG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_018100.fa Sequence name : NCLIV_018100 Sequence length : 578 VALUES OF COMPUTED PARAMETERS Coef20 : 4.432 CoefTot : -0.062 ChDiff : -17 ZoneTo : 33 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.641 1.741 0.259 0.752 MesoH : -0.578 0.226 -0.402 0.226 MuHd_075 : 24.877 20.054 7.038 6.417 MuHd_095 : 21.238 22.505 8.227 6.054 MuHd_100 : 23.430 19.875 7.543 5.795 MuHd_105 : 27.203 20.401 7.798 6.475 Hmax_075 : 20.000 20.900 3.509 7.050 Hmax_095 : 17.062 19.163 4.660 6.116 Hmax_100 : 17.500 20.100 3.618 6.700 Hmax_105 : 18.317 17.150 4.390 6.890 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2958 0.7042 DFMC : 0.4596 0.5404 This protein is probably imported in mitochondria. f(Ser) = 0.0606 f(Arg) = 0.0303 CMi = 0.53908 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 578 NCLIV_018100 MVFRALLLLCLLWPPGMQFLNNCAPAYCSVGSAEAGGAPPWRHESEARGAEQPDVDEAKFVAFPSEQRSIERIARRDPEA 80 RTTGQGVPKERAKELCAQANNVPACVQQQLNEPVARRAGRKRAAVIGVLAQGPVSPAVMGPNGHPPEDGDRLPEDGGPSY 160 VAASYVKFIEASGSKAIPVPAFATEEEYRRVFDSLDGLILPGGEAAIDRANAAYYRATKLLLDWAKEANDAGRYFPVVGI 240 CLGFEAMLIWGSEGRFDYFSVDDYRNVDRARRLKLLPDAFQSRLFGGPGFPWSQERPSLSASYEGPPDSSVDKEATSPAR 320 GGATLVPESDARFNAVNPMGLSEGSAGDFRGDRGRAPTRRLLFLHRERTGSPGREPSSSDIPLFSGEGNREFGHDTDDDD 400 ALEQVTNSKRVASLLQEQPASYFHHHRRMTRVEFETDPHLKTKFQLVASALVGDGTNPDGSDEIVAIVEAKGYPFYGFQS 480 HPEKPLFEHCPFAQVPHDMVSRMISLYVAAFLGSEANQSDHPVEPLEKEWYHLFERYPVYSTSSPDQNYVFEQVHVFPAI 560 LRGEYSAVHRVFGRSVVG 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_018100 4 ---MVFR|AL 0.073 . NCLIV_018100 42 GGAPPWR|HE 0.138 . NCLIV_018100 48 RHESEAR|GA 0.154 . NCLIV_018100 59 PDVDEAK|FV 0.078 . NCLIV_018100 68 AFPSEQR|SI 0.106 . NCLIV_018100 72 EQRSIER|IA 0.097 . NCLIV_018100 75 SIERIAR|RD 0.226 . NCLIV_018100 76 IERIARR|DP 0.206 . NCLIV_018100 81 RRDPEAR|TT 0.199 . NCLIV_018100 89 TGQGVPK|ER 0.074 . NCLIV_018100 91 QGVPKER|AK 0.091 . NCLIV_018100 93 VPKERAK|EL 0.090 . NCLIV_018100 116 LNEPVAR|RA 0.162 . NCLIV_018100 117 NEPVARR|AG 0.105 . NCLIV_018100 120 VARRAGR|KR 0.275 . NCLIV_018100 121 ARRAGRK|RA 0.104 . NCLIV_018100 122 RRAGRKR|AA 0.425 . NCLIV_018100 151 PPEDGDR|LP 0.101 . NCLIV_018100 167 VAASYVK|FI 0.080 . NCLIV_018100 175 IEASGSK|AI 0.057 . NCLIV_018100 189 ATEEEYR|RV 0.144 . NCLIV_018100 190 TEEEYRR|VF 0.099 . NCLIV_018100 209 GEAAIDR|AN 0.100 . NCLIV_018100 216 ANAAYYR|AT 0.093 . NCLIV_018100 219 AYYRATK|LL 0.095 . NCLIV_018100 226 LLLDWAK|EA 0.083 . NCLIV_018100 233 EANDAGR|YF 0.113 . NCLIV_018100 255 IWGSEGR|FD 0.095 . NCLIV_018100 265 FSVDDYR|NV 0.124 . NCLIV_018100 269 DYRNVDR|AR 0.077 . NCLIV_018100 271 RNVDRAR|RL 0.087 . NCLIV_018100 272 NVDRARR|LK 0.139 . NCLIV_018100 274 DRARRLK|LL 0.152 . NCLIV_018100 283 PDAFQSR|LF 0.101 . NCLIV_018100 296 FPWSQER|PS 0.077 . NCLIV_018100 313 PDSSVDK|EA 0.073 . NCLIV_018100 320 EATSPAR|GG 0.085 . NCLIV_018100 332 VPESDAR|FN 0.098 . NCLIV_018100 350 GSAGDFR|GD 0.097 . NCLIV_018100 353 GDFRGDR|GR 0.176 . NCLIV_018100 355 FRGDRGR|AP 0.092 . NCLIV_018100 359 RGRAPTR|RL 0.073 . NCLIV_018100 360 GRAPTRR|LL 0.166 . NCLIV_018100 366 RLLFLHR|ER 0.075 . NCLIV_018100 368 LFLHRER|TG 0.083 . NCLIV_018100 374 RTGSPGR|EP 0.079 . NCLIV_018100 390 FSGEGNR|EF 0.088 . NCLIV_018100 409 EQVTNSK|RV 0.065 . NCLIV_018100 410 QVTNSKR|VA 0.165 . NCLIV_018100 427 SYFHHHR|RM 0.113 . NCLIV_018100 428 YFHHHRR|MT 0.254 . NCLIV_018100 431 HHRRMTR|VE 0.209 . NCLIV_018100 441 ETDPHLK|TK 0.063 . NCLIV_018100 443 DPHLKTK|FQ 0.072 . NCLIV_018100 471 VAIVEAK|GY 0.074 . NCLIV_018100 484 FQSHPEK|PL 0.074 . NCLIV_018100 502 PHDMVSR|MI 0.103 . NCLIV_018100 528 PVEPLEK|EW 0.056 . NCLIV_018100 536 WYHLFER|YP 0.079 . NCLIV_018100 562 VFPAILR|GE 0.075 . NCLIV_018100 570 EYSAVHR|VF 0.116 . NCLIV_018100 574 VHRVFGR|SV 0.279 . ____________________________^_________________

  • Fasta :-

    >NCLIV_018100 ATGGTCTTCCGAGCCTTGCTGCTTCTCTGCCTCCTCTGGCCCCCAGGGATGCAGTTTTTG AACAACTGTGCACCTGCCTATTGCAGTGTGGGTTCCGCAGAGGCAGGAGGCGCTCCGCCT TGGCGACACGAGAGCGAGGCGCGGGGCGCCGAGCAGCCGGATGTGGACGAAGCGAAATTC GTCGCGTTCCCCTCAGAGCAGAGATCGATTGAAAGAATTGCGAGGCGAGATCCCGAGGCA AGAACGACGGGACAAGGTGTGCCCAAAGAACGCGCGAAAGAACTGTGTGCACAGGCGAAC AATGTACCGGCGTGCGTCCAGCAACAACTCAATGAACCTGTCGCGCGGCGCGCAGGCCGC AAGAGGGCGGCCGTCATTGGAGTCCTCGCTCAAGGCCCCGTCTCCCCTGCTGTCATGGGA CCTAACGGACACCCGCCAGAGGACGGAGATCGTCTTCCTGAGGACGGTGGCCCGTCCTAC GTCGCAGCCTCATACGTCAAGTTTATCGAAGCCAGTGGAAGCAAAGCCATTCCCGTGCCT GCCTTTGCGACCGAAGAGGAGTACCGTCGGGTCTTTGACTCACTGGACGGTCTCATTCTT CCCGGGGGAGAAGCCGCGATTGACCGTGCCAATGCCGCCTATTACCGCGCGACGAAACTC TTGCTTGACTGGGCCAAGGAGGCAAACGACGCAGGTCGGTACTTTCCTGTCGTTGGCATC TGCTTAGGTTTTGAAGCGATGCTCATTTGGGGCAGTGAAGGTCGATTTGACTATTTTTCC GTCGACGACTATCGGAACGTCGATCGGGCGAGGCGCCTGAAGCTCCTTCCAGACGCGTTT CAGTCTCGCCTTTTCGGCGGGCCAGGCTTTCCGTGGTCTCAGGAGCGTCCGTCGCTGTCC GCGTCCTATGAGGGCCCGCCCGACTCGAGTGTGGACAAGGAGGCCACGTCTCCCGCTCGT GGCGGCGCAACTCTCGTTCCCGAAAGCGATGCCCGGTTCAACGCTGTAAACCCGATGGGA CTGTCCGAGGGGTCGGCTGGAGACTTCCGTGGCGACCGCGGTCGCGCACCGACGCGACGG CTGCTGTTTCTCCACAGAGAAAGGACTGGATCTCCCGGCAGGGAGCCAAGCAGCTCAGAT ATTCCGCTTTTTTCCGGTGAAGGAAACAGAGAGTTTGGGCATGACACAGACGATGACGAT GCTCTGGAGCAAGTGACAAACTCGAAAAGAGTTGCCTCGCTCCTGCAGGAGCAGCCGGCG TCTTACTTCCATCACCATCGCCGGATGACGCGCGTCGAGTTCGAAACTGATCCGCATCTC AAGACGAAGTTCCAGCTCGTCGCCTCTGCCCTCGTCGGGGACGGAACGAACCCAGATGGG AGCGACGAGATCGTCGCAATTGTCGAGGCCAAAGGGTATCCTTTCTACGGCTTCCAGAGC CACCCGGAGAAGCCTCTGTTCGAACACTGCCCGTTCGCCCAGGTTCCTCATGACATGGTA TCCCGAATGATCTCACTCTACGTCGCAGCGTTTCTCGGAAGCGAGGCGAATCAATCAGAT CACCCAGTCGAGCCGTTGGAAAAAGAATGGTACCATCTGTTTGAACGCTACCCGGTGTAC AGCACCTCGTCTCCAGACCAAAACTACGTTTTTGAGCAGGTGCACGTGTTTCCTGCAATT CTTCGTGGAGAGTACAGTGCGGTGCATCGAGTCTTTGGCAGGTCCGTGGTGGGTTGA
  • Download Fasta

  • Fasta :-

    MVFRALLLLCLLWPPGMQFLNNCAPAYCSVGSAEAGGAPPWRHESEARGAEQPDVDEAKF VAFPSEQRSIERIARRDPEARTTGQGVPKERAKELCAQANNVPACVQQQLNEPVARRAGR KRAAVIGVLAQGPVSPAVMGPNGHPPEDGDRLPEDGGPSYVAASYVKFIEASGSKAIPVP AFATEEEYRRVFDSLDGLILPGGEAAIDRANAAYYRATKLLLDWAKEANDAGRYFPVVGI CLGFEAMLIWGSEGRFDYFSVDDYRNVDRARRLKLLPDAFQSRLFGGPGFPWSQERPSLS ASYEGPPDSSVDKEATSPARGGATLVPESDARFNAVNPMGLSEGSAGDFRGDRGRAPTRR LLFLHRERTGSPGREPSSSDIPLFSGEGNREFGHDTDDDDALEQVTNSKRVASLLQEQPA SYFHHHRRMTRVEFETDPHLKTKFQLVASALVGDGTNPDGSDEIVAIVEAKGYPFYGFQS HPEKPLFEHCPFAQVPHDMVSRMISLYVAAFLGSEANQSDHPVEPLEKEWYHLFERYPVY STSSPDQNYVFEQVHVFPAILRGEYSAVHRVFGRSVVG

    No Results
  • title: conserved cys residue
  • coordinates: C241
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_018100298 SQERPSLSAS0.995unspNCLIV_018100298 SQERPSLSAS0.995unspNCLIV_018100298 SQERPSLSAS0.995unspNCLIV_018100302 SSLSASYEGP0.992unspNCLIV_018100317 SKEATSPARG0.994unspNCLIV_018100371 SERTGSPGRE0.997unspNCLIV_018100377 SGREPSSSDI0.995unspNCLIV_018100430 THRRMTRVEF0.995unspNCLIV_01810069 SSEQRSIERI0.993unspNCLIV_018100260 SFDYFSVDDY0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India