NCLIV_021070 | conserved hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
NCLIV_021070OTHER0.9999920.0000050.000003
No Results

  • Fasta :-

    >NCLIV_021070 MRELRGFPSGLGAESEGTGPAPRVPLVSDSSPSDRAPPRNFDRDGIHPGASRIQRLEVIH GQLVAALRKEAKQVATLLVTGLLRPVIICMLTATLLSFVLTSSSFALFPRPVSPLTAPSL LSPSSSSDPHSSEGDAARLPSFPSSSSLRQTRSLVRDFSRGLGAVCHIFSSFCGIFFSTV FDLSLDVLIYVAVLTFCLALAVRRGWHRFLYYVMASSASFSLAAGCGGAIYLFTCRYLQP EEGGFTANASFSSDTLLADKNHGVPPETDAANRDVIGSEDRKRLCFFLSHLIGLLAKIPE HVSTVSFLPQPDTVLVLVALWNLSLGGAFVLLWLAPIGIRSQLLVAISVASAFTLHVLLL HFGVNYSPESPSTPTTVLLLCMAAWDLFAVLSPWGPLRWILQGTSAADARPMPLLAYEAS VARPLLSGESVRSAPMAPEPTGPGVSSVWERPSGMRTPGALRLQAEPRLQLEQGETATVI GYTGSEARVRVRLLEPDSIRNYLVKQNMRLEPLEAGFIIQDERARVHAETRRRQQASYAS AAPGDSQPSSREERSSPSEARRKQPCPAETQSRGSGETLRGVHELPVAAFGQLSVRTLRG AARGGAEPRVIRNAEREGEGRHRTEACLATTGRELKETIRDGEKQEGGAHRKFSTHTGPP RNGVTNREERGGETVEGQPAAGLAGHSGEGEAAEERERTLEIEIAVAKRQLHRLRRGNGR AMLGLGDFVFYSLLACNLTSWSFEAGLAASVAVWAGLVITSLGTTFGSRPFLPALPLSII LGLGVGAGIFYFVEPQADFLISVDAFF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_021070.fa Sequence name : NCLIV_021070 Sequence length : 807 VALUES OF COMPUTED PARAMETERS Coef20 : 3.004 CoefTot : 0.135 ChDiff : 4 ZoneTo : 2 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.241 2.453 0.472 0.866 MesoH : 1.275 1.423 0.138 0.569 MuHd_075 : 3.497 1.073 0.554 1.851 MuHd_095 : 20.018 11.935 4.051 4.811 MuHd_100 : 25.885 14.556 5.119 6.022 MuHd_105 : 26.806 16.189 5.316 7.019 Hmax_075 : 0.100 -0.467 -1.766 2.110 Hmax_095 : 2.700 4.100 -1.179 3.080 Hmax_100 : 14.300 9.200 1.156 3.930 Hmax_105 : 6.700 7.700 -0.532 3.730 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9654 0.0346 DFMC : 0.9674 0.0326
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 807 NCLIV_021070 MRELRGFPSGLGAESEGTGPAPRVPLVSDSSPSDRAPPRNFDRDGIHPGASRIQRLEVIHGQLVAALRKEAKQVATLLVT 80 GLLRPVIICMLTATLLSFVLTSSSFALFPRPVSPLTAPSLLSPSSSSDPHSSEGDAARLPSFPSSSSLRQTRSLVRDFSR 160 GLGAVCHIFSSFCGIFFSTVFDLSLDVLIYVAVLTFCLALAVRRGWHRFLYYVMASSASFSLAAGCGGAIYLFTCRYLQP 240 EEGGFTANASFSSDTLLADKNHGVPPETDAANRDVIGSEDRKRLCFFLSHLIGLLAKIPEHVSTVSFLPQPDTVLVLVAL 320 WNLSLGGAFVLLWLAPIGIRSQLLVAISVASAFTLHVLLLHFGVNYSPESPSTPTTVLLLCMAAWDLFAVLSPWGPLRWI 400 LQGTSAADARPMPLLAYEASVARPLLSGESVRSAPMAPEPTGPGVSSVWERPSGMRTPGALRLQAEPRLQLEQGETATVI 480 GYTGSEARVRVRLLEPDSIRNYLVKQNMRLEPLEAGFIIQDERARVHAETRRRQQASYASAAPGDSQPSSREERSSPSEA 560 RRKQPCPAETQSRGSGETLRGVHELPVAAFGQLSVRTLRGAARGGAEPRVIRNAEREGEGRHRTEACLATTGRELKETIR 640 DGEKQEGGAHRKFSTHTGPPRNGVTNREERGGETVEGQPAAGLAGHSGEGEAAEERERTLEIEIAVAKRQLHRLRRGNGR 720 AMLGLGDFVFYSLLACNLTSWSFEAGLAASVAVWAGLVITSLGTTFGSRPFLPALPLSIILGLGVGAGIFYFVEPQADFL 800 ISVDAFF 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ...........................................................................P.... 720 ................................................................................ 800 ....... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_021070 2 -----MR|EL 0.096 . NCLIV_021070 5 --MRELR|GF 0.302 . NCLIV_021070 23 GTGPAPR|VP 0.072 . NCLIV_021070 35 DSSPSDR|AP 0.096 . NCLIV_021070 39 SDRAPPR|NF 0.116 . NCLIV_021070 43 PPRNFDR|DG 0.120 . NCLIV_021070 52 IHPGASR|IQ 0.069 . NCLIV_021070 55 GASRIQR|LE 0.250 . NCLIV_021070 68 QLVAALR|KE 0.086 . NCLIV_021070 69 LVAALRK|EA 0.094 . NCLIV_021070 72 ALRKEAK|QV 0.103 . NCLIV_021070 84 LVTGLLR|PV 0.097 . NCLIV_021070 110 SFALFPR|PV 0.174 . NCLIV_021070 138 SEGDAAR|LP 0.083 . NCLIV_021070 149 PSSSSLR|QT 0.117 . NCLIV_021070 152 SSLRQTR|SL 0.364 . NCLIV_021070 156 QTRSLVR|DF 0.137 . NCLIV_021070 160 LVRDFSR|GL 0.172 . NCLIV_021070 203 CLALAVR|RG 0.067 . NCLIV_021070 204 LALAVRR|GW 0.147 . NCLIV_021070 208 VRRGWHR|FL 0.130 . NCLIV_021070 236 IYLFTCR|YL 0.102 . NCLIV_021070 260 DTLLADK|NH 0.055 . NCLIV_021070 273 ETDAANR|DV 0.181 . NCLIV_021070 281 VIGSEDR|KR 0.063 . NCLIV_021070 282 IGSEDRK|RL 0.081 . NCLIV_021070 283 GSEDRKR|LC 0.129 . NCLIV_021070 297 LIGLLAK|IP 0.065 . NCLIV_021070 340 LAPIGIR|SQ 0.080 . NCLIV_021070 398 SPWGPLR|WI 0.131 . NCLIV_021070 410 TSAADAR|PM 0.082 . NCLIV_021070 423 YEASVAR|PL 0.102 . NCLIV_021070 432 LSGESVR|SA 0.162 . NCLIV_021070 451 VSSVWER|PS 0.149 . NCLIV_021070 456 ERPSGMR|TP 0.094 . NCLIV_021070 462 RTPGALR|LQ 0.062 . NCLIV_021070 468 RLQAEPR|LQ 0.103 . NCLIV_021070 488 YTGSEAR|VR 0.069 . NCLIV_021070 490 GSEARVR|VR 0.075 . NCLIV_021070 492 EARVRVR|LL 0.085 . NCLIV_021070 500 LEPDSIR|NY 0.084 . NCLIV_021070 505 IRNYLVK|QN 0.088 . NCLIV_021070 509 LVKQNMR|LE 0.064 . NCLIV_021070 523 FIIQDER|AR 0.077 . NCLIV_021070 525 IQDERAR|VH 0.071 . NCLIV_021070 531 RVHAETR|RR 0.079 . NCLIV_021070 532 VHAETRR|RQ 0.123 . NCLIV_021070 533 HAETRRR|QQ 0.106 . NCLIV_021070 551 DSQPSSR|EE 0.092 . NCLIV_021070 554 PSSREER|SS 0.473 . NCLIV_021070 561 SSPSEAR|RK 0.096 . NCLIV_021070 562 SPSEARR|KQ 0.132 . NCLIV_021070 563 PSEARRK|QP 0.106 . NCLIV_021070 573 PAETQSR|GS 0.144 . NCLIV_021070 580 GSGETLR|GV 0.151 . NCLIV_021070 596 FGQLSVR|TL 0.088 . NCLIV_021070 599 LSVRTLR|GA 0.355 . NCLIV_021070 603 TLRGAAR|GG 0.094 . NCLIV_021070 609 RGGAEPR|VI 0.115 . NCLIV_021070 612 AEPRVIR|NA 0.312 . NCLIV_021070 616 VIRNAER|EG 0.092 . NCLIV_021070 621 EREGEGR|HR 0.087 . NCLIV_021070 623 EGEGRHR|TE 0.074 . NCLIV_021070 633 CLATTGR|EL 0.096 . NCLIV_021070 636 TTGRELK|ET 0.118 . NCLIV_021070 640 ELKETIR|DG 0.126 . NCLIV_021070 644 TIRDGEK|QE 0.068 . NCLIV_021070 651 QEGGAHR|KF 0.108 . NCLIV_021070 652 EGGAHRK|FS 0.099 . NCLIV_021070 661 THTGPPR|NG 0.081 . NCLIV_021070 667 RNGVTNR|EE 0.158 . NCLIV_021070 670 VTNREER|GG 0.419 . NCLIV_021070 696 GEAAEER|ER 0.073 . NCLIV_021070 698 AAEERER|TL 0.085 . NCLIV_021070 708 IEIAVAK|RQ 0.059 . NCLIV_021070 709 EIAVAKR|QL 0.230 . NCLIV_021070 713 AKRQLHR|LR 0.091 . NCLIV_021070 715 RQLHRLR|RG 0.074 . NCLIV_021070 716 QLHRLRR|GN 0.639 *ProP* NCLIV_021070 720 LRRGNGR|AM 0.106 . NCLIV_021070 769 GTTFGSR|PF 0.082 . ____________________________^_________________

  • Fasta :-

    >NCLIV_021070 ATGCGAGAGCTTCGTGGTTTCCCGTCTGGGTTGGGGGCCGAGAGCGAGGGGACTGGCCCA GCGCCGCGCGTGCCTCTCGTGTCGGATTCTTCCCCCTCTGACCGTGCACCCCCAAGAAAT TTCGATAGGGACGGCATACATCCAGGTGCGTCGAGGATTCAGAGGCTTGAAGTCATTCAT GGTCAACTTGTAGCTGCTCTTCGGAAGGAAGCGAAGCAAGTGGCGACGCTTCTTGTCACA GGTCTCCTTCGTCCTGTAATCATCTGCATGCTCACTGCAACGCTCCTGTCCTTCGTTCTG ACCTCTTCTTCGTTTGCCCTTTTCCCCCGTCCCGTTTCTCCGCTCACAGCTCCCTCTCTT CTTTCGCCGTCCTCTTCGTCGGATCCTCATTCTTCTGAGGGAGATGCTGCGCGCCTCCCC TCTTTCCCCTCTTCTTCGTCCTTGCGTCAAACGCGCAGTTTGGTCCGAGATTTTTCTCGA GGCCTTGGCGCGGTGTGCCACATTTTCAGTTCTTTTTGTGGGATCTTTTTCTCGACGGTT TTCGATCTGAGCTTAGACGTGCTCATCTACGTCGCCGTTCTCACCTTTTGTCTGGCTCTT GCCGTGCGCCGAGGATGGCATCGATTTCTCTATTACGTGATGGCTTCATCGGCCTCTTTC AGTCTGGCTGCTGGCTGCGGAGGAGCAATATATCTCTTTACATGCAGGTATTTGCAACCT GAGGAAGGTGGATTCACGGCGAACGCATCTTTCTCCAGCGACACACTTCTCGCCGACAAG AACCACGGTGTCCCTCCCGAAACCGACGCAGCGAACAGGGACGTTATCGGTTCAGAAGAC CGAAAGCGTCTGTGTTTTTTCCTGTCGCATCTCATCGGTCTGCTGGCGAAGATTCCAGAA CACGTCTCCACTGTCTCGTTCCTGCCACAACCGGACACTGTGCTCGTGCTTGTCGCTCTC TGGAACCTAAGTTTGGGGGGCGCATTTGTTCTTCTCTGGCTCGCCCCCATCGGAATCCGC AGTCAGCTTCTCGTGGCCATATCAGTCGCCTCGGCCTTCACCCTCCACGTTCTTCTGCTT CACTTCGGTGTCAACTATAGTCCGGAATCTCCGTCGACGCCGACGACAGTGCTTCTCCTC TGTATGGCTGCTTGGGATCTCTTTGCAGTTCTCTCGCCATGGGGACCGCTCCGTTGGATT CTACAGGGCACAAGCGCTGCCGACGCCCGACCAATGCCGTTGCTCGCCTATGAAGCCTCT GTCGCTCGTCCCCTGCTGTCGGGTGAGTCCGTTAGATCGGCGCCGATGGCCCCTGAACCG ACAGGACCGGGTGTTTCTTCAGTCTGGGAACGCCCTTCAGGTATGCGTACACCCGGGGCG CTACGGTTGCAAGCTGAGCCGCGCTTACAACTGGAGCAGGGGGAGACCGCAACGGTGATT GGCTACACCGGAAGCGAAGCACGCGTTCGGGTGCGTCTGCTGGAACCGGACAGCATACGA AACTATCTTGTAAAGCAGAACATGCGTTTGGAGCCCCTGGAAGCTGGATTTATCATTCAA GATGAGCGAGCACGCGTTCACGCAGAAACCCGGAGGCGGCAGCAGGCGTCATATGCGTCG GCCGCACCTGGCGACAGCCAGCCTTCTTCCAGAGAAGAACGCAGCTCGCCTTCAGAGGCT CGAAGAAAACAACCTTGTCCAGCAGAAACACAAAGCAGAGGAAGTGGCGAGACGCTCAGA GGTGTCCATGAGCTTCCGGTGGCAGCGTTCGGACAGCTGAGTGTACGCACACTCCGTGGG GCGGCGAGGGGCGGGGCAGAACCGAGAGTGATTAGAAATGCAGAGCGCGAAGGCGAAGGG CGTCACCGAACTGAAGCATGCCTCGCGACTACTGGCCGAGAACTGAAGGAGACCATAAGG GACGGAGAGAAACAGGAAGGGGGTGCGCACAGAAAATTTTCGACACACACTGGTCCACCG AGAAACGGTGTAACCAACCGAGAAGAGCGAGGGGGCGAAACTGTAGAGGGACAACCTGCT GCGGGCCTGGCGGGCCACAGCGGTGAGGGCGAGGCAGCTGAAGAGAGGGAGAGGACTTTA GAAATAGAGATCGCCGTCGCCAAGCGGCAGCTACACAGGTTGCGTCGCGGCAACGGACGA GCCATGCTGGGCCTGGGCGATTTCGTCTTCTATTCTCTCCTTGCATGCAACCTGACGAGC TGGAGTTTCGAAGCTGGACTGGCAGCAAGCGTTGCTGTTTGGGCGGGGCTGGTGATCACC TCTCTTGGAACGACCTTTGGTTCGCGCCCCTTCCTTCCAGCCCTTCCGCTCTCGATTATC CTCGGACTAGGAGTTGGAGCTGGCATCTTCTACTTTGTCGAGCCCCAGGCAGATTTTCTC ATTTCAGTGGACGCCTTCTTCTGA
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  • Fasta :-

    MRELRGFPSGLGAESEGTGPAPRVPLVSDSSPSDRAPPRNFDRDGIHPGASRIQRLEVIH GQLVAALRKEAKQVATLLVTGLLRPVIICMLTATLLSFVLTSSSFALFPRPVSPLTAPSL LSPSSSSDPHSSEGDAARLPSFPSSSSLRQTRSLVRDFSRGLGAVCHIFSSFCGIFFSTV FDLSLDVLIYVAVLTFCLALAVRRGWHRFLYYVMASSASFSLAAGCGGAIYLFTCRYLQP EEGGFTANASFSSDTLLADKNHGVPPETDAANRDVIGSEDRKRLCFFLSHLIGLLAKIPE HVSTVSFLPQPDTVLVLVALWNLSLGGAFVLLWLAPIGIRSQLLVAISVASAFTLHVLLL HFGVNYSPESPSTPTTVLLLCMAAWDLFAVLSPWGPLRWILQGTSAADARPMPLLAYEAS VARPLLSGESVRSAPMAPEPTGPGVSSVWERPSGMRTPGALRLQAEPRLQLEQGETATVI GYTGSEARVRVRLLEPDSIRNYLVKQNMRLEPLEAGFIIQDERARVHAETRRRQQASYAS AAPGDSQPSSREERSSPSEARRKQPCPAETQSRGSGETLRGVHELPVAAFGQLSVRTLRG AARGGAEPRVIRNAEREGEGRHRTEACLATTGRELKETIRDGEKQEGGAHRKFSTHTGPP RNGVTNREERGGETVEGQPAAGLAGHSGEGEAAEERERTLEIEIAVAKRQLHRLRRGNGR AMLGLGDFVFYSLLACNLTSWSFEAGLAASVAVWAGLVITSLGTTFGSRPFLPALPLSII LGLGVGAGIFYFVEPQADFLISVDAFF

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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_021070131 SSDPHSSEGD0.996unspNCLIV_021070131 SSDPHSSEGD0.996unspNCLIV_021070131 SSDPHSSEGD0.996unspNCLIV_021070132 SDPHSSEGDA0.993unspNCLIV_021070549 SDSQPSSREE0.997unspNCLIV_021070550 SSQPSSREER0.996unspNCLIV_021070556 SEERSSPSEA0.998unspNCLIV_021070575 SQSRGSGETL0.997unspNCLIV_02107031 SVSDSSPSDR0.996unspNCLIV_02107033 SDSSPSDRAP0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India