NCLIV_022920 | Renin, related

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_022920OTHER0.9958830.0000310.004086
No Results

  • Fasta :-

    >NCLIV_022920 MDTRIMSPSSRFRNLVNTQASSHEVGKRSSLYASLLDSPPVSFLPGGSAVAERDVEDESW QDPAGSFSRGAKTIDRACAFTRLREFTSLRDPLGFFNHAKKRHGQGKAGGRLPSVLCITA LCRERFLLFFCSTPGVVKSRPVYSSQLFAGWSCWLFTGKWKCAVLRCPFRSGVMVMPLRK MKSLRQIGWERNSITVPDLQAHLVASLRQQEGLSKRDGNFSGPSDGDDISIHDYMNAQYY TEIYVGSPGQKVRVVVDTGSSDLWVCSASCGMLCMLHKTYNHGKSETYQEDGTPYHVEYA SGPVGGFLSVDDVALASLRAAKFLLAEAVDLKGLGTAFFFGKFDGILGMGFPALATNGLK PFMQVAVEQNVVKNWIFAFYLGSANGVDGELAIGGVDEERFIGDINFSKVVDSRYWMIDT KGLKSNGDLVAPTTKMIIDSGTSLIAGPLDEVKRIANMMGAFAVPLMPEGTFFISCDKEK VLRDLQLEVEGQDYPIKIKDLLIPVSTAPGAPCLFGMMGLKALEGDASTPKGVKGFPTPR LLASEKGPIGRTWILGDLFMRNVYTVFDYDNKQIGFARLRN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_022920.fa Sequence name : NCLIV_022920 Sequence length : 581 VALUES OF COMPUTED PARAMETERS Coef20 : 4.661 CoefTot : 0.075 ChDiff : 6 ZoneTo : 23 KR : 3 DE : 1 CleavSite : 23 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.776 1.671 0.308 0.634 MesoH : 0.130 0.808 -0.154 0.400 MuHd_075 : 24.725 20.965 6.593 6.220 MuHd_095 : 11.363 15.551 4.359 5.053 MuHd_100 : 20.856 20.148 5.673 6.431 MuHd_105 : 29.275 21.300 7.408 7.729 Hmax_075 : 2.917 10.900 -0.150 2.180 Hmax_095 : -2.450 12.000 -0.322 4.690 Hmax_100 : 8.500 14.800 2.308 5.380 Hmax_105 : 10.850 12.833 0.944 4.398 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4734 0.5266 DFMC : 0.6062 0.3938
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 581 NCLIV_022920 MDTRIMSPSSRFRNLVNTQASSHEVGKRSSLYASLLDSPPVSFLPGGSAVAERDVEDESWQDPAGSFSRGAKTIDRACAF 80 TRLREFTSLRDPLGFFNHAKKRHGQGKAGGRLPSVLCITALCRERFLLFFCSTPGVVKSRPVYSSQLFAGWSCWLFTGKW 160 KCAVLRCPFRSGVMVMPLRKMKSLRQIGWERNSITVPDLQAHLVASLRQQEGLSKRDGNFSGPSDGDDISIHDYMNAQYY 240 TEIYVGSPGQKVRVVVDTGSSDLWVCSASCGMLCMLHKTYNHGKSETYQEDGTPYHVEYASGPVGGFLSVDDVALASLRA 320 AKFLLAEAVDLKGLGTAFFFGKFDGILGMGFPALATNGLKPFMQVAVEQNVVKNWIFAFYLGSANGVDGELAIGGVDEER 400 FIGDINFSKVVDSRYWMIDTKGLKSNGDLVAPTTKMIIDSGTSLIAGPLDEVKRIANMMGAFAVPLMPEGTFFISCDKEK 480 VLRDLQLEVEGQDYPIKIKDLLIPVSTAPGAPCLFGMMGLKALEGDASTPKGVKGFPTPRLLASEKGPIGRTWILGDLFM 560 RNVYTVFDYDNKQIGFARLRN 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ..................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_022920 4 ---MDTR|IM 0.082 . NCLIV_022920 11 IMSPSSR|FR 0.111 . NCLIV_022920 13 SPSSRFR|NL 0.126 . NCLIV_022920 27 SSHEVGK|RS 0.067 . NCLIV_022920 28 SHEVGKR|SS 0.185 . NCLIV_022920 53 GSAVAER|DV 0.295 . NCLIV_022920 69 PAGSFSR|GA 0.128 . NCLIV_022920 72 SFSRGAK|TI 0.216 . NCLIV_022920 76 GAKTIDR|AC 0.072 . NCLIV_022920 82 RACAFTR|LR 0.073 . NCLIV_022920 84 CAFTRLR|EF 0.070 . NCLIV_022920 90 REFTSLR|DP 0.090 . NCLIV_022920 100 GFFNHAK|KR 0.080 . NCLIV_022920 101 FFNHAKK|RH 0.137 . NCLIV_022920 102 FNHAKKR|HG 0.237 . NCLIV_022920 107 KRHGQGK|AG 0.099 . NCLIV_022920 111 QGKAGGR|LP 0.076 . NCLIV_022920 123 CITALCR|ER 0.066 . NCLIV_022920 125 TALCRER|FL 0.079 . NCLIV_022920 138 STPGVVK|SR 0.065 . NCLIV_022920 140 PGVVKSR|PV 0.130 . NCLIV_022920 159 CWLFTGK|WK 0.072 . NCLIV_022920 161 LFTGKWK|CA 0.057 . NCLIV_022920 166 WKCAVLR|CP 0.105 . NCLIV_022920 170 VLRCPFR|SG 0.112 . NCLIV_022920 179 VMVMPLR|KM 0.069 . NCLIV_022920 180 MVMPLRK|MK 0.076 . NCLIV_022920 182 MPLRKMK|SL 0.376 . NCLIV_022920 185 RKMKSLR|QI 0.223 . NCLIV_022920 191 RQIGWER|NS 0.087 . NCLIV_022920 208 HLVASLR|QQ 0.077 . NCLIV_022920 215 QQEGLSK|RD 0.057 . NCLIV_022920 216 QEGLSKR|DG 0.229 . NCLIV_022920 251 VGSPGQK|VR 0.059 . NCLIV_022920 253 SPGQKVR|VV 0.191 . NCLIV_022920 278 MLCMLHK|TY 0.067 . NCLIV_022920 284 KTYNHGK|SE 0.107 . NCLIV_022920 319 VALASLR|AA 0.081 . NCLIV_022920 322 ASLRAAK|FL 0.158 . NCLIV_022920 332 AEAVDLK|GL 0.081 . NCLIV_022920 342 TAFFFGK|FD 0.096 . NCLIV_022920 360 LATNGLK|PF 0.060 . NCLIV_022920 373 VEQNVVK|NW 0.064 . NCLIV_022920 400 GGVDEER|FI 0.155 . NCLIV_022920 409 GDINFSK|VV 0.076 . NCLIV_022920 414 SKVVDSR|YW 0.110 . NCLIV_022920 421 YWMIDTK|GL 0.066 . NCLIV_022920 424 IDTKGLK|SN 0.076 . NCLIV_022920 435 LVAPTTK|MI 0.082 . NCLIV_022920 453 GPLDEVK|RI 0.063 . NCLIV_022920 454 PLDEVKR|IA 0.180 . NCLIV_022920 478 FFISCDK|EK 0.050 . NCLIV_022920 480 ISCDKEK|VL 0.071 . NCLIV_022920 483 DKEKVLR|DL 0.103 . NCLIV_022920 497 GQDYPIK|IK 0.062 . NCLIV_022920 499 DYPIKIK|DL 0.063 . NCLIV_022920 521 FGMMGLK|AL 0.063 . NCLIV_022920 531 GDASTPK|GV 0.079 . NCLIV_022920 534 STPKGVK|GF 0.055 . NCLIV_022920 540 KGFPTPR|LL 0.075 . NCLIV_022920 546 RLLASEK|GP 0.061 . NCLIV_022920 551 EKGPIGR|TW 0.090 . NCLIV_022920 561 LGDLFMR|NV 0.117 . NCLIV_022920 572 VFDYDNK|QI 0.061 . NCLIV_022920 578 KQIGFAR|LR 0.087 . NCLIV_022920 580 IGFARLR|N- 0.080 . ____________________________^_________________

  • Fasta :-

    >NCLIV_022920 ATGGACACACGCATCATGTCTCCGTCGTCGCGGTTCCGGAATCTTGTCAACACTCAGGCC TCTTCCCACGAAGTGGGGAAGAGATCCTCCTTGTACGCTTCGCTGCTTGACTCTCCCCCA GTTTCCTTTCTTCCGGGCGGCTCAGCTGTCGCGGAACGGGATGTCGAGGACGAGTCGTGG CAGGATCCTGCTGGCTCTTTTTCTCGCGGCGCCAAGACCATCGACAGAGCGTGTGCGTTT ACCCGACTTCGCGAATTCACGTCTCTGAGAGATCCGCTCGGATTTTTCAACCATGCGAAG AAACGGCACGGACAAGGCAAGGCCGGAGGCCGGTTGCCCTCCGTGCTCTGCATCACTGCA CTCTGTCGTGAGAGATTTCTTTTGTTCTTTTGTTCAACACCCGGGGTGGTCAAGTCTCGT CCTGTTTACTCTTCACAACTGTTCGCCGGTTGGTCCTGCTGGCTCTTCACGGGAAAGTGG AAATGCGCCGTTCTCCGTTGTCCGTTCCGTTCAGGAGTGATGGTGATGCCTCTGCGCAAA ATGAAATCGTTGCGCCAGATTGGCTGGGAGAGAAACAGCATCACCGTTCCAGATTTGCAA GCGCATCTTGTTGCCTCTCTGCGTCAGCAAGAAGGCCTTTCCAAACGTGACGGGAACTTC TCGGGGCCTTCCGATGGAGACGACATCAGCATTCATGACTACATGAATGCACAGTACTAC ACGGAAATTTATGTGGGGTCTCCGGGCCAGAAGGTGCGCGTCGTCGTCGACACAGGCAGC AGCGATCTGTGGGTCTGCAGTGCGTCTTGTGGGATGCTGTGCATGCTGCACAAGACCTAC AACCACGGGAAATCGGAAACTTACCAAGAAGACGGGACGCCGTACCACGTTGAGTATGCA TCGGGCCCCGTTGGAGGCTTCCTCTCTGTCGACGACGTCGCGCTGGCGTCCCTCCGAGCA GCAAAGTTTCTGCTAGCCGAGGCTGTTGACCTGAAGGGTCTGGGCACAGCCTTCTTCTTC GGGAAATTCGACGGCATCCTGGGAATGGGCTTTCCCGCGTTGGCCACGAACGGCCTGAAG CCGTTTATGCAGGTGGCGGTCGAGCAGAATGTTGTTAAAAACTGGATCTTCGCCTTTTAT CTCGGTTCGGCGAACGGCGTGGACGGAGAGCTGGCCATTGGCGGAGTCGACGAAGAGCGC TTCATCGGCGACATCAACTTCTCCAAGGTTGTCGATTCGCGTTACTGGATGATCGACACA AAGGGCCTGAAGAGTAACGGAGACCTTGTTGCGCCGACCACGAAGATGATCATCGACAGC GGCACTTCTCTGATTGCAGGCCCTCTGGACGAAGTGAAGCGCATCGCCAACATGATGGGA GCTTTCGCGGTTCCCCTGATGCCCGAGGGCACGTTCTTCATTTCATGCGATAAGGAAAAA GTCCTCCGAGATCTGCAGCTCGAGGTCGAGGGGCAAGACTACCCCATAAAAATCAAGGAT CTCCTCATTCCCGTTAGCACGGCCCCGGGAGCGCCTTGCCTCTTTGGAATGATGGGGCTG AAAGCCTTGGAGGGCGATGCCTCGACACCCAAAGGCGTCAAGGGATTCCCGACCCCTCGA CTGCTTGCCTCAGAAAAGGGACCGATTGGCCGTACTTGGATCTTGGGAGACCTTTTCATG CGCAACGTGTACACAGTGTTCGACTACGACAACAAACAGATTGGGTTTGCGAGACTCAGG AACTGA
  • Download Fasta

  • Fasta :-

    MDTRIMSPSSRFRNLVNTQASSHEVGKRSSLYASLLDSPPVSFLPGGSAVAERDVEDESW QDPAGSFSRGAKTIDRACAFTRLREFTSLRDPLGFFNHAKKRHGQGKAGGRLPSVLCITA LCRERFLLFFCSTPGVVKSRPVYSSQLFAGWSCWLFTGKWKCAVLRCPFRSGVMVMPLRK MKSLRQIGWERNSITVPDLQAHLVASLRQQEGLSKRDGNFSGPSDGDDISIHDYMNAQYY TEIYVGSPGQKVRVVVDTGSSDLWVCSASCGMLCMLHKTYNHGKSETYQEDGTPYHVEYA SGPVGGFLSVDDVALASLRAAKFLLAEAVDLKGLGTAFFFGKFDGILGMGFPALATNGLK PFMQVAVEQNVVKNWIFAFYLGSANGVDGELAIGGVDEERFIGDINFSKVVDSRYWMIDT KGLKSNGDLVAPTTKMIIDSGTSLIAGPLDEVKRIANMMGAFAVPLMPEGTFFISCDKEK VLRDLQLEVEGQDYPIKIKDLLIPVSTAPGAPCLFGMMGLKALEGDASTPKGVKGFPTPR LLASEKGPIGRTWILGDLFMRNVYTVFDYDNKQIGFARLRN

  • title: inhibitor binding site
  • coordinates: D257,G259,S261,H296,V297,E298,I346
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_022920214 SQEGLSKRDG0.994unspNCLIV_022920214 SQEGLSKRDG0.994unspNCLIV_022920214 SQEGLSKRDG0.994unspNCLIV_022920425 SKGLKSNGDL0.995unspNCLIV_0229207 STRIMSPSSR0.991unspNCLIV_02292059 SVEDESWQDP0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India