NCLIV_025890 | Peptidase M24, related

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_025890OTHER0.9999700.0000210.000008
No Results

  • Fasta :-

    >NCLIV_025890 MARDGKGGDSGLSAGEKLSQLRKLMKDRQLDAFIVYSGDAHGSEIPAPCDERRQFLTGFD GSNGVAVVTADEALLWTDGRYFVQAEQQLDASLWTLMKQNTPGTPKVQGWLFNNAKVKRV GVDGHSTLISEYRQLLHAGFVPSPSSSAPSLGAAGDLSLKSNGSGGPVDAGNAKELVILS ENLVDQALDDVAWFLNLRGADAPCSPVFLSYCLIVNTASALHPAENGDSSVQDGSSALIV LYTNEERIKGAVAEALARYRVHVRPYGSVCDDLRHVLRNKPSFIDFISQAERPAGSNNQN ADASNQKSDDGSERSKTCAQMLWVDPTANVSIFATANECDARVTLAVTPAAKQKAVKNSA ELEGMKEAHVQDGVALAKFFSWLERTSGEPQPEPFSEWLVAQVVDGFRALSPSFRGISFS TIASADANAAIVHYRPSREDSAPVTSSCLFLLDSGGHYAVGGTTDVTRTVHTGTPTELQR RYFTLVLKGFIGLSRQVFPQGTRGPQLDVLARQYLWASGLDYRHGTGHGVGSYLNVHEGP IGISPRLICQAGETDLAEGNVLSVEPGFYEQGSLGIRIENLVYVTKATPAENFEDMKFLR FDQLTVVPIQKKLILPSLLTNEEIQWLNDYHQRVWTLVAPRLREETKNKAVTSITVGEGR RISVPTPGETLSWLEKATAPLPLH
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_025890.fa Sequence name : NCLIV_025890 Sequence length : 684 VALUES OF COMPUTED PARAMETERS Coef20 : 3.003 CoefTot : 0.276 ChDiff : -13 ZoneTo : 3 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.347 1.394 0.292 0.508 MesoH : -0.368 0.438 -0.270 0.261 MuHd_075 : 14.013 0.952 2.798 2.199 MuHd_095 : 10.474 4.431 4.616 3.274 MuHd_100 : 26.598 12.624 7.768 6.859 MuHd_105 : 36.925 18.631 9.776 8.878 Hmax_075 : -1.400 -0.525 -1.982 1.330 Hmax_095 : -4.300 -0.900 -1.498 1.540 Hmax_100 : 2.800 4.800 -0.441 3.380 Hmax_105 : 2.275 2.800 -0.557 2.958 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9888 0.0112 DFMC : 0.9652 0.0348
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 684 NCLIV_025890 MARDGKGGDSGLSAGEKLSQLRKLMKDRQLDAFIVYSGDAHGSEIPAPCDERRQFLTGFDGSNGVAVVTADEALLWTDGR 80 YFVQAEQQLDASLWTLMKQNTPGTPKVQGWLFNNAKVKRVGVDGHSTLISEYRQLLHAGFVPSPSSSAPSLGAAGDLSLK 160 SNGSGGPVDAGNAKELVILSENLVDQALDDVAWFLNLRGADAPCSPVFLSYCLIVNTASALHPAENGDSSVQDGSSALIV 240 LYTNEERIKGAVAEALARYRVHVRPYGSVCDDLRHVLRNKPSFIDFISQAERPAGSNNQNADASNQKSDDGSERSKTCAQ 320 MLWVDPTANVSIFATANECDARVTLAVTPAAKQKAVKNSAELEGMKEAHVQDGVALAKFFSWLERTSGEPQPEPFSEWLV 400 AQVVDGFRALSPSFRGISFSTIASADANAAIVHYRPSREDSAPVTSSCLFLLDSGGHYAVGGTTDVTRTVHTGTPTELQR 480 RYFTLVLKGFIGLSRQVFPQGTRGPQLDVLARQYLWASGLDYRHGTGHGVGSYLNVHEGPIGISPRLICQAGETDLAEGN 560 VLSVEPGFYEQGSLGIRIENLVYVTKATPAENFEDMKFLRFDQLTVVPIQKKLILPSLLTNEEIQWLNDYHQRVWTLVAP 640 RLREETKNKAVTSITVGEGRRISVPTPGETLSWLEKATAPLPLH 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_025890 3 ----MAR|DG 0.130 . NCLIV_025890 6 -MARDGK|GG 0.181 . NCLIV_025890 17 GLSAGEK|LS 0.059 . NCLIV_025890 22 EKLSQLR|KL 0.080 . NCLIV_025890 23 KLSQLRK|LM 0.082 . NCLIV_025890 26 QLRKLMK|DR 0.066 . NCLIV_025890 28 RKLMKDR|QL 0.119 . NCLIV_025890 52 PAPCDER|RQ 0.068 . NCLIV_025890 53 APCDERR|QF 0.209 . NCLIV_025890 80 LLWTDGR|YF 0.123 . NCLIV_025890 98 SLWTLMK|QN 0.069 . NCLIV_025890 106 NTPGTPK|VQ 0.062 . NCLIV_025890 116 WLFNNAK|VK 0.069 . NCLIV_025890 118 FNNAKVK|RV 0.117 . NCLIV_025890 119 NNAKVKR|VG 0.260 . NCLIV_025890 133 TLISEYR|QL 0.123 . NCLIV_025890 160 AGDLSLK|SN 0.081 . NCLIV_025890 174 VDAGNAK|EL 0.065 . NCLIV_025890 198 AWFLNLR|GA 0.082 . NCLIV_025890 247 LYTNEER|IK 0.086 . NCLIV_025890 249 TNEERIK|GA 0.073 . NCLIV_025890 258 VAEALAR|YR 0.084 . NCLIV_025890 260 EALARYR|VH 0.063 . NCLIV_025890 264 RYRVHVR|PY 0.119 . NCLIV_025890 274 SVCDDLR|HV 0.102 . NCLIV_025890 278 DLRHVLR|NK 0.084 . NCLIV_025890 280 RHVLRNK|PS 0.062 . NCLIV_025890 292 FISQAER|PA 0.120 . NCLIV_025890 307 ADASNQK|SD 0.103 . NCLIV_025890 314 SDDGSER|SK 0.143 . NCLIV_025890 316 DGSERSK|TC 0.068 . NCLIV_025890 342 ANECDAR|VT 0.098 . NCLIV_025890 352 AVTPAAK|QK 0.059 . NCLIV_025890 354 TPAAKQK|AV 0.112 . NCLIV_025890 357 AKQKAVK|NS 0.072 . NCLIV_025890 366 AELEGMK|EA 0.064 . NCLIV_025890 378 DGVALAK|FF 0.085 . NCLIV_025890 385 FFSWLER|TS 0.113 . NCLIV_025890 408 QVVDGFR|AL 0.102 . NCLIV_025890 415 ALSPSFR|GI 0.163 . NCLIV_025890 435 AAIVHYR|PS 0.087 . NCLIV_025890 438 VHYRPSR|ED 0.221 . NCLIV_025890 468 GTTDVTR|TV 0.175 . NCLIV_025890 480 TPTELQR|RY 0.079 . NCLIV_025890 481 PTELQRR|YF 0.140 . NCLIV_025890 488 YFTLVLK|GF 0.058 . NCLIV_025890 495 GFIGLSR|QV 0.136 . NCLIV_025890 503 VFPQGTR|GP 0.062 . NCLIV_025890 512 QLDVLAR|QY 0.078 . NCLIV_025890 523 ASGLDYR|HG 0.091 . NCLIV_025890 546 PIGISPR|LI 0.145 . NCLIV_025890 577 QGSLGIR|IE 0.075 . NCLIV_025890 586 NLVYVTK|AT 0.069 . NCLIV_025890 597 ENFEDMK|FL 0.067 . NCLIV_025890 600 EDMKFLR|FD 0.086 . NCLIV_025890 611 TVVPIQK|KL 0.054 . NCLIV_025890 612 VVPIQKK|LI 0.090 . NCLIV_025890 633 LNDYHQR|VW 0.087 . NCLIV_025890 641 WTLVAPR|LR 0.070 . NCLIV_025890 643 LVAPRLR|EE 0.077 . NCLIV_025890 647 RLREETK|NK 0.062 . NCLIV_025890 649 REETKNK|AV 0.096 . NCLIV_025890 660 ITVGEGR|RI 0.095 . NCLIV_025890 661 TVGEGRR|IS 0.099 . NCLIV_025890 676 TLSWLEK|AT 0.075 . ____________________________^_________________

  • Fasta :-

    >NCLIV_025890 ATGGCGCGAGATGGCAAGGGTGGGGATTCCGGGCTGTCGGCAGGGGAGAAGCTCTCCCAG CTGCGCAAGCTTATGAAAGACCGCCAACTAGACGCGTTCATTGTCTACAGCGGGGACGCA CATGGCAGTGAAATTCCGGCCCCGTGCGACGAAAGACGCCAGTTCCTCACCGGCTTCGAC GGCAGCAATGGCGTGGCCGTCGTCACCGCTGACGAGGCGCTACTGTGGACTGACGGAAGA TATTTCGTCCAGGCCGAACAGCAGCTGGACGCTTCTCTGTGGACTCTCATGAAACAAAAC ACGCCGGGGACTCCGAAAGTCCAGGGCTGGCTTTTCAACAATGCAAAAGTGAAACGTGTA GGCGTCGACGGTCACTCCACGCTGATCTCGGAGTATCGACAGCTGCTCCACGCCGGCTTC GTCCCCTCGCCGTCGTCTTCCGCCCCTTCCCTCGGCGCCGCAGGCGACCTGTCCCTGAAA AGCAACGGCAGTGGCGGACCCGTAGACGCTGGAAACGCGAAGGAACTCGTCATCCTTTCT GAAAACCTCGTGGACCAGGCCCTAGACGACGTGGCGTGGTTTCTGAATCTTCGAGGCGCA GATGCTCCTTGTTCTCCTGTCTTCCTCTCCTACTGCTTGATCGTCAACACGGCTTCGGCG CTCCACCCAGCTGAAAACGGCGACTCTTCAGTGCAAGACGGCTCGTCAGCTCTGATTGTT CTGTATACAAACGAGGAGCGGATCAAAGGCGCCGTTGCTGAGGCGCTAGCCAGATACCGC GTGCACGTTCGTCCTTACGGGAGCGTGTGCGATGATTTGCGGCACGTCCTCCGAAACAAA CCGTCCTTCATCGACTTCATCTCCCAAGCGGAACGCCCCGCCGGCTCCAACAACCAAAAC GCCGACGCTTCCAACCAGAAAAGTGACGACGGATCAGAGAGGAGCAAAACGTGTGCTCAA ATGCTCTGGGTTGATCCAACCGCCAACGTATCCATTTTCGCAACTGCGAACGAGTGTGAC GCCCGCGTGACGCTGGCAGTGACCCCAGCTGCGAAGCAGAAGGCAGTGAAGAACTCGGCG GAGCTTGAGGGAATGAAGGAGGCACACGTGCAGGACGGCGTCGCTCTCGCCAAGTTCTTC TCGTGGTTGGAGCGGACGAGCGGGGAACCGCAACCTGAGCCGTTCTCTGAGTGGCTTGTG GCCCAGGTTGTCGACGGTTTTCGAGCGCTCTCCCCGTCTTTCAGGGGAATCTCCTTTTCC ACCATCGCCTCTGCCGACGCGAACGCCGCCATCGTCCACTATCGGCCCTCGCGGGAGGAC AGTGCACCGGTCACGTCTTCGTGTCTCTTCCTCCTCGATAGCGGCGGTCACTACGCCGTC GGCGGGACGACAGATGTCACGCGAACCGTGCACACGGGGACTCCAACAGAACTCCAACGA CGCTATTTCACGCTGGTTCTCAAGGGGTTTATAGGCCTGTCTCGGCAGGTGTTTCCACAG GGAACGCGCGGGCCGCAGCTCGACGTGCTGGCGCGCCAGTATTTGTGGGCTTCTGGCCTG GACTATCGGCATGGAACGGGACACGGTGTTGGAAGCTATTTGAACGTCCACGAAGGGCCG ATCGGTATTTCTCCCCGCCTCATTTGTCAAGCAGGCGAGACTGATTTGGCGGAGGGGAAC GTGCTGTCGGTGGAGCCCGGATTCTATGAGCAAGGCAGCCTTGGCATCCGCATAGAGAAT CTTGTCTACGTCACAAAAGCCACTCCGGCCGAGAACTTCGAGGACATGAAGTTTCTCCGT TTCGACCAGCTTACTGTTGTTCCCATCCAGAAAAAGCTGATTCTCCCTTCTCTCCTGACA AACGAGGAAATTCAGTGGCTGAACGATTACCACCAGCGAGTATGGACACTGGTGGCTCCT CGTCTTCGAGAAGAAACCAAAAACAAGGCGGTGACCTCAATCACTGTGGGAGAAGGCAGA AGAATCTCAGTTCCCACTCCGGGTGAAACTCTGAGTTGGCTCGAGAAAGCCACAGCTCCG TTGCCTCTCCACTAG
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  • Fasta :-

    MARDGKGGDSGLSAGEKLSQLRKLMKDRQLDAFIVYSGDAHGSEIPAPCDERRQFLTGFD GSNGVAVVTADEALLWTDGRYFVQAEQQLDASLWTLMKQNTPGTPKVQGWLFNNAKVKRV GVDGHSTLISEYRQLLHAGFVPSPSSSAPSLGAAGDLSLKSNGSGGPVDAGNAKELVILS ENLVDQALDDVAWFLNLRGADAPCSPVFLSYCLIVNTASALHPAENGDSSVQDGSSALIV LYTNEERIKGAVAEALARYRVHVRPYGSVCDDLRHVLRNKPSFIDFISQAERPAGSNNQN ADASNQKSDDGSERSKTCAQMLWVDPTANVSIFATANECDARVTLAVTPAAKQKAVKNSA ELEGMKEAHVQDGVALAKFFSWLERTSGEPQPEPFSEWLVAQVVDGFRALSPSFRGISFS TIASADANAAIVHYRPSREDSAPVTSSCLFLLDSGGHYAVGGTTDVTRTVHTGTPTELQR RYFTLVLKGFIGLSRQVFPQGTRGPQLDVLARQYLWASGLDYRHGTGHGVGSYLNVHEGP IGISPRLICQAGETDLAEGNVLSVEPGFYEQGSLGIRIENLVYVTKATPAENFEDMKFLR FDQLTVVPIQKKLILPSLLTNEEIQWLNDYHQRVWTLVAPRLREETKNKAVTSITVGEGR RISVPTPGETLSWLEKATAPLPLH

  • title: active site
  • coordinates: H433,D453,D465,S532,E565,E579
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_025890437 SHYRPSREDS0.997unspNCLIV_025890437 SHYRPSREDS0.997unspNCLIV_025890437 SHYRPSREDS0.997unspNCLIV_025890230 SNGDSSVQDG0.995unspNCLIV_025890387 SLERTSGEPQ0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India