NCLIV_025950 | Aspartic protease 7, related

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_IDPredictionOTHERSPmTPCS_Position
NCLIV_025950OTHER0.9986990.0001960.001105
No Results

  • Fasta :-

    >NCLIV_025950 MEGSSLQGFWHEDQFRLLAPPRTVTRNSQSFYDIKSQVLQAQRKTHSSDESGPSSLLTLP IRTNFGCHVQETELFVDQKASGIWGLEIWSQFGPETYMTRTLLNSTNKSSAVVPSTLPDG ASSFALCLAEHGGAFSIGDANGELHTSDTVTSNFIPHQESYSVYLSGISVGDKIISLENS KGDRADPSNVPQTLRGSALQSSSPARDDRPNPPHHLPHPSTKFEVLLDSGTTMSYFPTRI YDEIVGAIEEYAELKGGRRTGNRRRRLAGAGEIPTAAINEAPGTNSLARGKLIKLLGQEE SVSGSEFVSDSMSAQHRITVRSLAATAHSGVEYDVLSTGTEGLSEFLPAGSAEQDDEVIM NLVDRLTSDANHVDTSGTVNTEGIRRAAPGEISISNPQRRRQERPTPSLAKTPATNEANQ HLGSSPSSSAAAGHNSQTPHPQSEHLASGRGRRQQRRQARRVELGQEVRDSEAEAIGEII TTLSVDDEVAYELLPPSASPRQSQAVKVESTAGELCFYLPKGRADLSYFPDIWLHFVPPH QNSGSASSLRRDAALQNGHGNETTETKETGSGWVRWQPASYLYTKGNEHYRCVAMSDDPR ADSSGVLGSSFFIGHDLIFDVRHEMIGIAEASCPGIKLKDRPRDLPL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_025950.fa Sequence name : NCLIV_025950 Sequence length : 647 VALUES OF COMPUTED PARAMETERS Coef20 : 3.337 CoefTot : 0.000 ChDiff : -18 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.100 1.200 0.153 0.569 MesoH : -0.135 0.170 -0.288 0.235 MuHd_075 : 30.384 10.609 7.210 4.104 MuHd_095 : 12.899 6.695 1.025 3.456 MuHd_100 : 20.092 2.666 2.661 2.722 MuHd_105 : 21.977 3.675 2.736 2.325 Hmax_075 : 10.967 5.300 -0.429 3.698 Hmax_095 : 2.000 3.150 -2.752 2.651 Hmax_100 : 4.400 3.100 -2.474 3.050 Hmax_105 : 0.263 1.100 -3.853 2.030 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9384 0.0616 DFMC : 0.9260 0.0740
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 647 NCLIV_025950 MEGSSLQGFWHEDQFRLLAPPRTVTRNSQSFYDIKSQVLQAQRKTHSSDESGPSSLLTLPIRTNFGCHVQETELFVDQKA 80 SGIWGLEIWSQFGPETYMTRTLLNSTNKSSAVVPSTLPDGASSFALCLAEHGGAFSIGDANGELHTSDTVTSNFIPHQES 160 YSVYLSGISVGDKIISLENSKGDRADPSNVPQTLRGSALQSSSPARDDRPNPPHHLPHPSTKFEVLLDSGTTMSYFPTRI 240 YDEIVGAIEEYAELKGGRRTGNRRRRLAGAGEIPTAAINEAPGTNSLARGKLIKLLGQEESVSGSEFVSDSMSAQHRITV 320 RSLAATAHSGVEYDVLSTGTEGLSEFLPAGSAEQDDEVIMNLVDRLTSDANHVDTSGTVNTEGIRRAAPGEISISNPQRR 400 RQERPTPSLAKTPATNEANQHLGSSPSSSAAAGHNSQTPHPQSEHLASGRGRRQQRRQARRVELGQEVRDSEAEAIGEII 480 TTLSVDDEVAYELLPPSASPRQSQAVKVESTAGELCFYLPKGRADLSYFPDIWLHFVPPHQNSGSASSLRRDAALQNGHG 560 NETTETKETGSGWVRWQPASYLYTKGNEHYRCVAMSDDPRADSSGVLGSSFFIGHDLIFDVRHEMIGIAEASCPGIKLKD 640 RPRDLPL 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .........................P...................................................... 320 ................................................................................ 400 ...........................................................P.................... 480 ................................................................................ 560 ................................................................................ 640 ....... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ NCLIV_025950 16 WHEDQFR|LL 0.084 . NCLIV_025950 22 RLLAPPR|TV 0.106 . NCLIV_025950 26 PPRTVTR|NS 0.085 . NCLIV_025950 35 QSFYDIK|SQ 0.066 . NCLIV_025950 43 QVLQAQR|KT 0.076 . NCLIV_025950 44 VLQAQRK|TH 0.089 . NCLIV_025950 62 LLTLPIR|TN 0.083 . NCLIV_025950 79 ELFVDQK|AS 0.072 . NCLIV_025950 100 PETYMTR|TL 0.071 . NCLIV_025950 108 LLNSTNK|SS 0.090 . NCLIV_025950 173 GISVGDK|II 0.070 . NCLIV_025950 181 ISLENSK|GD 0.059 . NCLIV_025950 184 ENSKGDR|AD 0.095 . NCLIV_025950 195 NVPQTLR|GS 0.072 . NCLIV_025950 206 QSSSPAR|DD 0.194 . NCLIV_025950 209 SPARDDR|PN 0.261 . NCLIV_025950 222 LPHPSTK|FE 0.070 . NCLIV_025950 239 MSYFPTR|IY 0.141 . NCLIV_025950 255 EEYAELK|GG 0.060 . NCLIV_025950 258 AELKGGR|RT 0.086 . NCLIV_025950 259 ELKGGRR|TG 0.082 . NCLIV_025950 263 GRRTGNR|RR 0.087 . NCLIV_025950 264 RRTGNRR|RR 0.108 . NCLIV_025950 265 RTGNRRR|RL 0.145 . NCLIV_025950 266 TGNRRRR|LA 0.790 *ProP* NCLIV_025950 289 GTNSLAR|GK 0.124 . NCLIV_025950 291 NSLARGK|LI 0.059 . NCLIV_025950 294 ARGKLIK|LL 0.097 . NCLIV_025950 317 SMSAQHR|IT 0.138 . NCLIV_025950 321 QHRITVR|SL 0.147 . NCLIV_025950 365 IMNLVDR|LT 0.130 . NCLIV_025950 385 VNTEGIR|RA 0.088 . NCLIV_025950 386 NTEGIRR|AA 0.137 . NCLIV_025950 399 SISNPQR|RR 0.089 . NCLIV_025950 400 ISNPQRR|RQ 0.189 . NCLIV_025950 401 SNPQRRR|QE 0.116 . NCLIV_025950 404 QRRRQER|PT 0.327 . NCLIV_025950 411 PTPSLAK|TP 0.060 . NCLIV_025950 450 EHLASGR|GR 0.107 . NCLIV_025950 452 LASGRGR|RQ 0.091 . NCLIV_025950 453 ASGRGRR|QQ 0.472 . NCLIV_025950 456 RGRRQQR|RQ 0.188 . NCLIV_025950 457 GRRQQRR|QA 0.367 . NCLIV_025950 460 QQRRQAR|RV 0.592 *ProP* NCLIV_025950 461 QRRQARR|VE 0.156 . NCLIV_025950 469 ELGQEVR|DS 0.114 . NCLIV_025950 501 PPSASPR|QS 0.150 . NCLIV_025950 507 RQSQAVK|VE 0.079 . NCLIV_025950 521 LCFYLPK|GR 0.057 . NCLIV_025950 523 FYLPKGR|AD 0.075 . NCLIV_025950 550 GSASSLR|RD 0.097 . NCLIV_025950 551 SASSLRR|DA 0.277 . NCLIV_025950 567 NETTETK|ET 0.069 . NCLIV_025950 575 TGSGWVR|WQ 0.091 . NCLIV_025950 585 ASYLYTK|GN 0.074 . NCLIV_025950 591 KGNEHYR|CV 0.137 . NCLIV_025950 600 AMSDDPR|AD 0.112 . NCLIV_025950 622 DLIFDVR|HE 0.082 . NCLIV_025950 637 ASCPGIK|LK 0.057 . NCLIV_025950 639 CPGIKLK|DR 0.075 . NCLIV_025950 641 GIKLKDR|PR 0.082 . NCLIV_025950 643 KLKDRPR|DL 0.100 . ____________________________^_________________

  • Fasta :-

    >NCLIV_025950 ATGGAGGGCAGTAGTCTGCAGGGCTTTTGGCATGAAGATCAGTTCCGGCTTCTAGCTCCA CCTCGGACGGTGACGCGAAACAGTCAGTCTTTTTACGATATCAAGAGTCAAGTTCTCCAA GCTCAAAGAAAGACGCATTCTTCAGACGAATCTGGACCTTCTTCACTCCTGACCCTGCCC ATCAGAACGAACTTCGGTTGTCATGTACAGGAAACAGAACTGTTCGTCGATCAGAAGGCA AGCGGAATTTGGGGTCTAGAAATTTGGAGTCAATTCGGACCGGAAACATATATGACACGT ACTTTGTTGAATTCAACGAACAAGAGCAGCGCTGTTGTCCCCTCAACCCTCCCTGACGGT GCGAGTTCCTTCGCTCTCTGTCTTGCGGAGCATGGTGGCGCCTTCTCCATCGGAGACGCA AATGGAGAGCTACACACTTCAGATACAGTAACGTCGAATTTTATTCCACACCAAGAGTCC TATTCGGTCTACCTCTCAGGTATCAGTGTTGGTGATAAGATCATATCTCTCGAAAACAGT AAAGGTGACAGAGCCGATCCGAGCAATGTGCCCCAGACTCTGCGGGGGAGCGCGCTTCAA AGTAGCAGTCCAGCCCGAGACGACCGCCCTAATCCTCCACATCACCTGCCCCATCCATCG ACGAAATTCGAGGTGCTTCTCGACTCGGGTACCACGATGAGCTATTTCCCCACCAGAATT TATGACGAAATTGTTGGTGCTATTGAAGAGTATGCAGAGCTAAAGGGTGGCCGCCGAACC GGGAATCGTAGAAGAAGACTCGCAGGTGCTGGGGAGATTCCAACAGCAGCAATCAACGAG GCTCCTGGGACAAACAGCCTTGCCAGAGGGAAACTAATCAAGCTTCTTGGCCAGGAAGAA AGTGTTTCAGGTTCCGAATTTGTTTCGGACTCGATGTCAGCACAACACCGAATCACGGTA CGAAGCTTGGCGGCCACGGCGCACTCAGGTGTTGAATATGATGTACTTTCAACTGGTACG GAAGGCCTTTCCGAGTTTCTTCCAGCCGGGAGCGCCGAGCAAGACGACGAGGTTATAATG AACTTGGTGGACAGGTTAACTAGTGATGCAAATCATGTGGACACTAGTGGAACGGTAAAT ACAGAAGGTATCAGGCGTGCCGCCCCTGGTGAGATCAGCATTTCTAACCCACAGCGCCGT CGTCAGGAGCGCCCAACTCCAAGTTTAGCAAAGACCCCGGCAACAAACGAAGCGAACCAG CATCTTGGCAGCTCACCATCATCCTCCGCTGCAGCAGGACATAATTCACAGACGCCGCAC CCCCAGAGCGAGCATCTAGCGTCTGGCCGAGGTCGGAGACAGCAGCGTCGTCAAGCGAGG CGCGTGGAGCTCGGACAGGAGGTGCGAGACAGCGAAGCAGAAGCGATTGGCGAGATCATC ACCACGTTAAGCGTCGATGACGAAGTTGCGTATGAGTTGTTGCCCCCCTCAGCTTCACCG AGGCAGAGTCAAGCGGTAAAGGTGGAGAGCACAGCTGGTGAACTTTGTTTCTACTTGCCT AAGGGCCGAGCCGATCTCTCATACTTCCCGGATATTTGGCTACACTTTGTACCACCCCAT CAGAACAGTGGATCGGCAAGCTCTCTCCGCAGGGATGCTGCACTGCAGAATGGCCACGGT AATGAGACCACAGAAACTAAGGAAACAGGTTCTGGTTGGGTGCGCTGGCAACCCGCAAGC TACTTGTATACGAAAGGCAACGAGCATTATCGATGTGTAGCGATGAGTGACGATCCTCGT GCCGACAGCTCTGGCGTCTTGGGCAGTAGCTTCTTCATCGGTCACGATCTCATCTTCGAT GTCCGCCATGAGATGATCGGTATTGCTGAGGCAAGCTGCCCAGGGATCAAGCTGAAGGAT CGACCCAGGGACCTGCCCTTGTAA
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  • Fasta :-

    MEGSSLQGFWHEDQFRLLAPPRTVTRNSQSFYDIKSQVLQAQRKTHSSDESGPSSLLTLP IRTNFGCHVQETELFVDQKASGIWGLEIWSQFGPETYMTRTLLNSTNKSSAVVPSTLPDG ASSFALCLAEHGGAFSIGDANGELHTSDTVTSNFIPHQESYSVYLSGISVGDKIISLENS KGDRADPSNVPQTLRGSALQSSSPARDDRPNPPHHLPHPSTKFEVLLDSGTTMSYFPTRI YDEIVGAIEEYAELKGGRRTGNRRRRLAGAGEIPTAAINEAPGTNSLARGKLIKLLGQEE SVSGSEFVSDSMSAQHRITVRSLAATAHSGVEYDVLSTGTEGLSEFLPAGSAEQDDEVIM NLVDRLTSDANHVDTSGTVNTEGIRRAAPGEISISNPQRRRQERPTPSLAKTPATNEANQ HLGSSPSSSAAAGHNSQTPHPQSEHLASGRGRRQQRRQARRVELGQEVRDSEAEAIGEII TTLSVDDEVAYELLPPSASPRQSQAVKVESTAGELCFYLPKGRADLSYFPDIWLHFVPPH QNSGSASSLRRDAALQNGHGNETTETKETGSGWVRWQPASYLYTKGNEHYRCVAMSDDPR ADSSGVLGSSFFIGHDLIFDVRHEMIGIAEASCPGIKLKDRPRDLPL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_02595048 SKTHSSDESG0.994unspNCLIV_02595048 SKTHSSDESG0.994unspNCLIV_02595048 SKTHSSDESG0.994unspNCLIV_025950471 SEVRDSEAEA0.995unspNCLIV_025950484 SITTLSVDDE0.991unspNCLIV_02595028 SVTRNSQSFY0.995unspNCLIV_02595030 SRNSQSFYDI0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India