NCLIV_027730 | hypothetical protein

UniProt_ID: F0VGZ0

Computed_GO_Component_IDs:
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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	NCLIV_027730	OTHER	0.999982	0.000004	0.000014

No Results

Fasta :-
>NCLIV_027730 MPLCRSSASSSSHHRDEPESPQGHDTRELARKFSRLRIGSSLAGHAHADAAPAMLPMSSR DQIVVDRLSRKVNASNFATVMKAYLIIKNRVAAQRANKEFQQGQRRSFAILGRRSSRVAL ESPSHSRSKTGSLKSVAETSKATSGRQRRPESCLARNECADGVHGEGAFPPKTLSPPPVP GDEGSCHSSNSSTDADGIKAVGAVGRMKACQSLLEQRLGFMGFKSVRIAGDGNCQFRSCS WNMFGSEEHHKVVRSRAVQHMREHKDEYGVFFEDDDFEKYLKNMARSGTWGDELSVRAIA DSFQCTIHIITSTDSNWYLRYDPQGAGGTLEAVRHIFLTYISPIHYNAFTLEELTASDTE TPGAQRG
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_027730.fa Sequence name : NCLIV_027730 Sequence length : 367 VALUES OF COMPUTED PARAMETERS Coef20 : 3.771 CoefTot : 0.474 ChDiff : 8 ZoneTo : 15 KR : 2 DE : 0 CleavSite : 17 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.853 1.053 -0.081 0.482 MesoH : -0.691 -0.024 -0.417 0.158 MuHd_075 : 17.670 8.351 3.330 5.526 MuHd_095 : 15.916 10.998 6.190 2.325 MuHd_100 : 17.256 9.211 5.245 3.278 MuHd_105 : 15.940 7.113 3.407 3.763 Hmax_075 : 0.800 -0.700 -2.252 1.150 Hmax_095 : 1.575 1.200 -0.410 0.193 Hmax_100 : 3.400 -0.900 -0.568 0.570 Hmax_105 : 5.000 -0.200 -0.669 0.910 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8819 0.1181 DFMC : 0.7886 0.2114

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 367 NCLIV_027730 MPLCRSSASSSSHHRDEPESPQGHDTRELARKFSRLRIGSSLAGHAHADAAPAMLPMSSRDQIVVDRLSRKVNASNFATV 80 MKAYLIIKNRVAAQRANKEFQQGQRRSFAILGRRSSRVALESPSHSRSKTGSLKSVAETSKATSGRQRRPESCLARNECA 160 DGVHGEGAFPPKTLSPPPVPGDEGSCHSSNSSTDADGIKAVGAVGRMKACQSLLEQRLGFMGFKSVRIAGDGNCQFRSCS 240 WNMFGSEEHHKVVRSRAVQHMREHKDEYGVFFEDDDFEKYLKNMARSGTWGDELSVRAIADSFQCTIHIITSTDSNWYLR 320 YDPQGAGGTLEAVRHIFLTYISPIHYNAFTLEELTASDTETPGAQRG 400 ................................................................................ 80 ....................................................................P........... 160 ................................................................................ 240 ................................................................................ 320 ............................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_027730 5 --MPLCR|SS 0.111 . NCLIV_027730 15 SSSSHHR|DE 0.143 . NCLIV_027730 27 PQGHDTR|EL 0.101 . NCLIV_027730 31 DTRELAR|KF 0.093 . NCLIV_027730 32 TRELARK|FS 0.105 . NCLIV_027730 35 LARKFSR|LR 0.082 . NCLIV_027730 37 RKFSRLR|IG 0.077 . NCLIV_027730 60 MLPMSSR|DQ 0.108 . NCLIV_027730 67 DQIVVDR|LS 0.088 . NCLIV_027730 70 VVDRLSR|KV 0.250 . NCLIV_027730 71 VDRLSRK|VN 0.081 . NCLIV_027730 82 NFATVMK|AY 0.068 . NCLIV_027730 88 KAYLIIK|NR 0.060 . NCLIV_027730 90 YLIIKNR|VA 0.093 . NCLIV_027730 95 NRVAAQR|AN 0.106 . NCLIV_027730 98 AAQRANK|EF 0.167 . NCLIV_027730 105 EFQQGQR|RS 0.085 . NCLIV_027730 106 FQQGQRR|SF 0.192 . NCLIV_027730 113 SFAILGR|RS 0.093 . NCLIV_027730 114 FAILGRR|SS 0.176 . NCLIV_027730 117 LGRRSSR|VA 0.304 . NCLIV_027730 127 ESPSHSR|SK 0.158 . NCLIV_027730 129 PSHSRSK|TG 0.064 . NCLIV_027730 134 SKTGSLK|SV 0.091 . NCLIV_027730 141 SVAETSK|AT 0.071 . NCLIV_027730 146 SKATSGR|QR 0.110 . NCLIV_027730 148 ATSGRQR|RP 0.095 . NCLIV_027730 149 TSGRQRR|PE 0.516 *ProP* NCLIV_027730 156 PESCLAR|NE 0.105 . NCLIV_027730 172 EGAFPPK|TL 0.070 . NCLIV_027730 199 TDADGIK|AV 0.136 . NCLIV_027730 206 AVGAVGR|MK 0.088 . NCLIV_027730 208 GAVGRMK|AC 0.068 . NCLIV_027730 217 QSLLEQR|LG 0.083 . NCLIV_027730 224 LGFMGFK|SV 0.109 . NCLIV_027730 227 MGFKSVR|IA 0.178 . NCLIV_027730 237 DGNCQFR|SC 0.192 . NCLIV_027730 251 GSEEHHK|VV 0.074 . NCLIV_027730 254 EHHKVVR|SR 0.140 . NCLIV_027730 256 HKVVRSR|AV 0.194 . NCLIV_027730 262 RAVQHMR|EH 0.107 . NCLIV_027730 265 QHMREHK|DE 0.180 . NCLIV_027730 279 EDDDFEK|YL 0.063 . NCLIV_027730 282 DFEKYLK|NM 0.057 . NCLIV_027730 286 YLKNMAR|SG 0.153 . NCLIV_027730 297 GDELSVR|AI 0.120 . NCLIV_027730 320 DSNWYLR|YD 0.108 . NCLIV_027730 334 GTLEAVR|HI 0.077 . NCLIV_027730 366 ETPGAQR|G- 0.078 . ____________________________^_________________

Fasta :-
>NCLIV_027730 ATGCCGCTTTGTCGAAGTTCAGCCTCGTCATCTTCTCACCACCGGGATGAGCCGGAGAGT CCGCAGGGACACGACACGCGTGAGTTAGCCCGCAAGTTCTCTCGACTCCGAATTGGAAGC TCTTTGGCAGGCCACGCACATGCAGACGCAGCGCCGGCGATGCTGCCAATGAGCAGCCGG GATCAAATAGTGGTGGATCGGCTCTCGAGAAAAGTGAATGCAAGTAACTTCGCGACGGTT ATGAAGGCGTACCTCATTATAAAGAATCGAGTGGCTGCGCAGAGAGCGAACAAAGAATTT CAACAGGGACAAAGGCGCTCGTTCGCTATCTTGGGCAGGAGAAGCAGCCGCGTGGCCTTG GAAAGCCCCTCGCATAGCCGCAGCAAGACGGGAAGTCTGAAGAGCGTGGCGGAGACGTCC AAAGCAACATCAGGCAGGCAAAGGCGACCCGAATCATGTTTAGCTCGAAATGAGTGTGCC GACGGCGTTCACGGGGAAGGCGCCTTTCCGCCAAAGACGTTAAGCCCGCCGCCGGTGCCT GGAGATGAGGGGTCGTGTCACAGTTCAAATTCGTCCACCGACGCTGACGGCATCAAGGCC GTTGGTGCGGTGGGAAGAATGAAGGCATGCCAGTCACTCCTTGAACAGCGCTTAGGGTTT ATGGGTTTCAAGAGTGTGCGCATTGCGGGTGACGGGAATTGCCAGTTCCGTTCCTGCTCG TGGAACATGTTCGGCTCTGAAGAGCACCACAAAGTGGTGCGCTCCCGAGCTGTACAGCAC ATGCGTGAGCATAAAGATGAATACGGGGTTTTCTTTGAGGACGACGACTTTGAAAAGTAC CTGAAGAATATGGCGCGTTCAGGAACATGGGGAGATGAGCTATCTGTTCGTGCAATAGCT GATAGTTTCCAATGTACAATTCATATTATCACTTCCACCGACTCGAACTGGTATCTGCGG TACGATCCCCAGGGCGCGGGTGGAACATTAGAAGCCGTGCGGCACATCTTCCTCACGTAC ATCTCACCGATACATTACAATGCATTTACACTCGAAGAGCTGACCGCGTCCGACACGGAA ACCCCGGGAGCGCAACGAGGTTGA
Download Fasta

Fasta :-

MPLCRSSASSSSHHRDEPESPQGHDTRELARKFSRLRIGSSLAGHAHADAAPAMLPMSSR DQIVVDRLSRKVNASNFATVMKAYLIIKNRVAAQRANKEFQQGQRRSFAILGRRSSRVAL ESPSHSRSKTGSLKSVAETSKATSGRQRRPESCLARNECADGVHGEGAFPPKTLSPPPVP GDEGSCHSSNSSTDADGIKAVGAVGRMKACQSLLEQRLGFMGFKSVRIAGDGNCQFRSCS WNMFGSEEHHKVVRSRAVQHMREHKDEYGVFFEDDDFEKYLKNMARSGTWGDELSVRAIA DSFQCTIHIITSTDSNWYLRYDPQGAGGTLEAVRHIFLTYISPIHYNAFTLEELTASDTE TPGAQRG

Ubiquitin thiolesterase protein OTUB2 (Otubain-2)

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	NCLIV_027730	20 S	DEPESPQGH	0.996	unsp	NCLIV_027730	20 S	DEPESPQGH	0.996	unsp	NCLIV_027730	20 S	DEPESPQGH	0.996	unsp	NCLIV_027730	58 S	MLPMSSRDQ	0.996	unsp	NCLIV_027730	69 S	VDRLSRKVN	0.994	unsp	NCLIV_027730	115 S	LGRRSSRVA	0.992	unsp	NCLIV_027730	116 S	GRRSSRVAL	0.991	unsp	NCLIV_027730	135 S	GSLKSVAET	0.992	unsp	NCLIV_027730	144 S	SKATSGRQR	0.996	unsp	NCLIV_027730	191 S	HSSNSSTDA	0.993	unsp	NCLIV_027730	10 S	SSASSSSHH	0.994	unsp	NCLIV_027730	12 S	ASSSSHHRD	0.993	unsp

NCLIV_027730 | hypothetical protein

ID's

UniProt_ID: F0VGZ0

GEO Functions

Computed_GO_Component_IDs:

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Ubiquitin thiolesterase protein OTUB2 (Otubain-2)

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India