• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:  GO:0019538      

  • Computed_GO_Processes:  protein metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_028370OTHER0.9997590.0001220.000119
No Results
  • Fasta :-

    >NCLIV_028370 MDADAWTTLVKKAFLAGQEVCRERRNPQLDPLHLFEAMLRDKQSFASQVLSQCPGDFAQL KEDVHRAVLKFPQQNPPPDFPSPNHALMAVLRHGKEIQRQLNDSLMSADSLFLALVQEKS IRGLLTEAGFMMKQIEEKAKSVRGLRKISSSDDDANFEALKKYGTDFTDLAEKGKLDPVI GREDEIRRVIRILCRRTKNNPVLIGEPGVGKSAIVEGLARRIVENDVPSNLRCRLVSLDV GALISGAKYRGEFEERLTAVLKEVKDAAGKVILFIDEIHVILGAGKTEGALDAANLLKPM LARGELRCIGATTLDEYRKHVEKDAAFERRFQQVHVREPSVQATISILRGLKDRYASHHG VRILDSALVEAAQLADRYITARFLPDKAIDLMDEACAIARVQVDSKPEAVDVLERQKVQL EVEVLALEKEKDPASQKRLAEVRQHLGEIADALRPLYLQYQQEKGRIDELGKLAQKQDEL KAKIDRAQRVGDLDLVAELRFDALPGVEARFKKLQAEQEEYERTHKPLLTEVVGPEQIAD VVQRWTNIPVHKLTQTETERLLAFGKTLAEQVIGQPQAVEAVSQAILRSAAGLSKRNKPI GSFLFLGPTGVGKTELCKRVAESLFDTKERLVRFDMSEYMEQHSVSRLIGAPPGYVGHDE GGQLTEEIRRNPYSVVLFDEVEKAHSQVWNVLLQVLDDGRLTDSQGRTVDFSNTIIILTS NLGAAFLLEAAQRVGTEEQLAAEAAAKEMVMMEVRKFFKPEMLNRLDDIVIFKALTNVNL RQVMNLQMEEVRERLAEKRIELTLTDRATDHVVHEAFDPAYGARPLKRFVERHIVSDLSL KLLKGEIVPDSRVLCDWDEKRRAWVWETTTAVESTASVRKTPGHPVEAEMDAESLSPDSR TLSLGSRTDSYTNRSSAMHETNAKKFRY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_028370.fa Sequence name : NCLIV_028370 Sequence length : 928 VALUES OF COMPUTED PARAMETERS Coef20 : 3.887 CoefTot : 0.000 ChDiff : -9 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.371 1.753 0.143 0.648 MesoH : -0.834 0.418 -0.446 0.188 MuHd_075 : 21.287 18.759 6.432 5.274 MuHd_095 : 16.172 9.529 4.146 4.630 MuHd_100 : 17.239 10.299 5.074 4.715 MuHd_105 : 20.035 11.632 6.269 4.737 Hmax_075 : 19.717 21.350 3.263 6.720 Hmax_095 : 5.250 8.400 -0.624 4.401 Hmax_100 : 13.600 8.600 0.884 4.780 Hmax_105 : 13.650 12.100 2.052 5.350 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8977 0.1023 DFMC : 0.9036 0.0964
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 928 NCLIV_028370 MDADAWTTLVKKAFLAGQEVCRERRNPQLDPLHLFEAMLRDKQSFASQVLSQCPGDFAQLKEDVHRAVLKFPQQNPPPDF 80 PSPNHALMAVLRHGKEIQRQLNDSLMSADSLFLALVQEKSIRGLLTEAGFMMKQIEEKAKSVRGLRKISSSDDDANFEAL 160 KKYGTDFTDLAEKGKLDPVIGREDEIRRVIRILCRRTKNNPVLIGEPGVGKSAIVEGLARRIVENDVPSNLRCRLVSLDV 240 GALISGAKYRGEFEERLTAVLKEVKDAAGKVILFIDEIHVILGAGKTEGALDAANLLKPMLARGELRCIGATTLDEYRKH 320 VEKDAAFERRFQQVHVREPSVQATISILRGLKDRYASHHGVRILDSALVEAAQLADRYITARFLPDKAIDLMDEACAIAR 400 VQVDSKPEAVDVLERQKVQLEVEVLALEKEKDPASQKRLAEVRQHLGEIADALRPLYLQYQQEKGRIDELGKLAQKQDEL 480 KAKIDRAQRVGDLDLVAELRFDALPGVEARFKKLQAEQEEYERTHKPLLTEVVGPEQIADVVQRWTNIPVHKLTQTETER 560 LLAFGKTLAEQVIGQPQAVEAVSQAILRSAAGLSKRNKPIGSFLFLGPTGVGKTELCKRVAESLFDTKERLVRFDMSEYM 640 EQHSVSRLIGAPPGYVGHDEGGQLTEEIRRNPYSVVLFDEVEKAHSQVWNVLLQVLDDGRLTDSQGRTVDFSNTIIILTS 720 NLGAAFLLEAAQRVGTEEQLAAEAAAKEMVMMEVRKFFKPEMLNRLDDIVIFKALTNVNLRQVMNLQMEEVRERLAEKRI 800 ELTLTDRATDHVVHEAFDPAYGARPLKRFVERHIVSDLSLKLLKGEIVPDSRVLCDWDEKRRAWVWETTTAVESTASVRK 880 TPGHPVEAEMDAESLSPDSRTLSLGSRTDSYTNRSSAMHETNAKKFRY 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................ 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_028370 11 AWTTLVK|KA 0.065 . NCLIV_028370 12 WTTLVKK|AF 0.095 . NCLIV_028370 22 AGQEVCR|ER 0.077 . NCLIV_028370 24 QEVCRER|RN 0.077 . NCLIV_028370 25 EVCRERR|NP 0.191 . NCLIV_028370 40 LFEAMLR|DK 0.079 . NCLIV_028370 42 EAMLRDK|QS 0.066 . NCLIV_028370 61 GDFAQLK|ED 0.056 . NCLIV_028370 66 LKEDVHR|AV 0.137 . NCLIV_028370 70 VHRAVLK|FP 0.073 . NCLIV_028370 92 ALMAVLR|HG 0.113 . NCLIV_028370 95 AVLRHGK|EI 0.135 . NCLIV_028370 99 HGKEIQR|QL 0.104 . NCLIV_028370 119 LALVQEK|SI 0.088 . NCLIV_028370 122 VQEKSIR|GL 0.095 . NCLIV_028370 133 EAGFMMK|QI 0.074 . NCLIV_028370 138 MKQIEEK|AK 0.068 . NCLIV_028370 140 QIEEKAK|SV 0.139 . NCLIV_028370 143 EKAKSVR|GL 0.142 . NCLIV_028370 146 KSVRGLR|KI 0.241 . NCLIV_028370 147 SVRGLRK|IS 0.089 . NCLIV_028370 161 ANFEALK|KY 0.067 . NCLIV_028370 162 NFEALKK|YG 0.087 . NCLIV_028370 173 FTDLAEK|GK 0.052 . NCLIV_028370 175 DLAEKGK|LD 0.065 . NCLIV_028370 182 LDPVIGR|ED 0.083 . NCLIV_028370 187 GREDEIR|RV 0.135 . NCLIV_028370 188 REDEIRR|VI 0.099 . NCLIV_028370 191 EIRRVIR|IL 0.246 . NCLIV_028370 195 VIRILCR|RT 0.074 . NCLIV_028370 196 IRILCRR|TK 0.099 . NCLIV_028370 198 ILCRRTK|NN 0.108 . NCLIV_028370 211 GEPGVGK|SA 0.089 . NCLIV_028370 220 IVEGLAR|RI 0.070 . NCLIV_028370 221 VEGLARR|IV 0.171 . NCLIV_028370 232 DVPSNLR|CR 0.066 . NCLIV_028370 234 PSNLRCR|LV 0.115 . NCLIV_028370 248 ALISGAK|YR 0.070 . NCLIV_028370 250 ISGAKYR|GE 0.143 . NCLIV_028370 256 RGEFEER|LT 0.075 . NCLIV_028370 262 RLTAVLK|EV 0.075 . NCLIV_028370 265 AVLKEVK|DA 0.068 . NCLIV_028370 270 VKDAAGK|VI 0.057 . NCLIV_028370 286 VILGAGK|TE 0.059 . NCLIV_028370 298 DAANLLK|PM 0.062 . NCLIV_028370 303 LKPMLAR|GE 0.092 . NCLIV_028370 307 LARGELR|CI 0.128 . NCLIV_028370 318 TTLDEYR|KH 0.069 . NCLIV_028370 319 TLDEYRK|HV 0.117 . NCLIV_028370 323 YRKHVEK|DA 0.091 . NCLIV_028370 329 KDAAFER|RF 0.096 . NCLIV_028370 330 DAAFERR|FQ 0.172 . NCLIV_028370 337 FQQVHVR|EP 0.100 . NCLIV_028370 349 ATISILR|GL 0.079 . NCLIV_028370 352 SILRGLK|DR 0.114 . NCLIV_028370 354 LRGLKDR|YA 0.195 . NCLIV_028370 362 ASHHGVR|IL 0.115 . NCLIV_028370 377 AAQLADR|YI 0.086 . NCLIV_028370 382 DRYITAR|FL 0.123 . NCLIV_028370 387 ARFLPDK|AI 0.072 . NCLIV_028370 400 EACAIAR|VQ 0.081 . NCLIV_028370 406 RVQVDSK|PE 0.057 . NCLIV_028370 415 AVDVLER|QK 0.079 . NCLIV_028370 417 DVLERQK|VQ 0.053 . NCLIV_028370 429 EVLALEK|EK 0.054 . NCLIV_028370 431 LALEKEK|DP 0.065 . NCLIV_028370 437 KDPASQK|RL 0.063 . NCLIV_028370 438 DPASQKR|LA 0.314 . NCLIV_028370 443 KRLAEVR|QH 0.088 . NCLIV_028370 454 EIADALR|PL 0.080 . NCLIV_028370 464 LQYQQEK|GR 0.071 . NCLIV_028370 466 YQQEKGR|ID 0.095 . NCLIV_028370 472 RIDELGK|LA 0.062 . NCLIV_028370 476 LGKLAQK|QD 0.056 . NCLIV_028370 481 QKQDELK|AK 0.061 . NCLIV_028370 483 QDELKAK|ID 0.079 . NCLIV_028370 486 LKAKIDR|AQ 0.099 . NCLIV_028370 489 KIDRAQR|VG 0.137 . NCLIV_028370 500 DLVAELR|FD 0.070 . NCLIV_028370 510 LPGVEAR|FK 0.136 . NCLIV_028370 512 GVEARFK|KL 0.067 . NCLIV_028370 513 VEARFKK|LQ 0.366 . NCLIV_028370 523 EQEEYER|TH 0.069 . NCLIV_028370 526 EYERTHK|PL 0.109 . NCLIV_028370 544 IADVVQR|WT 0.107 . NCLIV_028370 552 TNIPVHK|LT 0.075 . NCLIV_028370 560 TQTETER|LL 0.074 . NCLIV_028370 566 RLLAFGK|TL 0.065 . NCLIV_028370 588 VSQAILR|SA 0.123 . NCLIV_028370 595 SAAGLSK|RN 0.064 . NCLIV_028370 596 AAGLSKR|NK 0.155 . NCLIV_028370 598 GLSKRNK|PI 0.096 . NCLIV_028370 613 GPTGVGK|TE 0.060 . NCLIV_028370 618 GKTELCK|RV 0.072 . NCLIV_028370 619 KTELCKR|VA 0.199 . NCLIV_028370 628 ESLFDTK|ER 0.056 . NCLIV_028370 630 LFDTKER|LV 0.100 . NCLIV_028370 633 TKERLVR|FD 0.271 . NCLIV_028370 647 EQHSVSR|LI 0.108 . NCLIV_028370 669 QLTEEIR|RN 0.070 . NCLIV_028370 670 LTEEIRR|NP 0.087 . NCLIV_028370 683 LFDEVEK|AH 0.065 . NCLIV_028370 700 QVLDDGR|LT 0.085 . NCLIV_028370 707 LTDSQGR|TV 0.106 . NCLIV_028370 733 LLEAAQR|VG 0.079 . NCLIV_028370 747 AAEAAAK|EM 0.061 . NCLIV_028370 755 MVMMEVR|KF 0.086 . NCLIV_028370 756 VMMEVRK|FF 0.102 . NCLIV_028370 759 EVRKFFK|PE 0.060 . NCLIV_028370 765 KPEMLNR|LD 0.098 . NCLIV_028370 773 DDIVIFK|AL 0.065 . NCLIV_028370 781 LTNVNLR|QV 0.123 . NCLIV_028370 792 LQMEEVR|ER 0.076 . NCLIV_028370 794 MEEVRER|LA 0.102 . NCLIV_028370 798 RERLAEK|RI 0.070 . NCLIV_028370 799 ERLAEKR|IE 0.122 . NCLIV_028370 807 ELTLTDR|AT 0.093 . NCLIV_028370 824 DPAYGAR|PL 0.099 . NCLIV_028370 827 YGARPLK|RF 0.087 . NCLIV_028370 828 GARPLKR|FV 0.470 . NCLIV_028370 832 LKRFVER|HI 0.109 . NCLIV_028370 841 VSDLSLK|LL 0.056 . NCLIV_028370 844 LSLKLLK|GE 0.055 . NCLIV_028370 852 EIVPDSR|VL 0.070 . NCLIV_028370 860 LCDWDEK|RR 0.054 . NCLIV_028370 861 CDWDEKR|RA 0.225 . NCLIV_028370 862 DWDEKRR|AW 0.137 . NCLIV_028370 879 ESTASVR|KT 0.080 . NCLIV_028370 880 STASVRK|TP 0.090 . NCLIV_028370 900 SLSPDSR|TL 0.110 . NCLIV_028370 907 TLSLGSR|TD 0.092 . NCLIV_028370 914 TDSYTNR|SS 0.224 . NCLIV_028370 924 MHETNAK|KF 0.063 . NCLIV_028370 925 HETNAKK|FR 0.092 . NCLIV_028370 927 TNAKKFR|Y- 0.196 . ____________________________^_________________
  • Fasta :-

    >NCLIV_028370 ATGGATGCCGACGCGTGGACGACTCTGGTCAAGAAGGCGTTCCTCGCCGGCCAGGAGGTC TGCCGAGAGCGGCGGAATCCTCAGCTGGATCCTCTCCACCTGTTTGAAGCGATGCTTCGC GACAAGCAAAGTTTCGCGAGTCAGGTTCTCTCGCAGTGCCCCGGCGATTTTGCACAGCTG AAGGAAGATGTCCACCGAGCCGTTCTCAAGTTTCCGCAGCAAAACCCGCCGCCGGACTTC CCCAGTCCAAACCACGCGCTGATGGCGGTGCTGAGGCACGGCAAGGAAATCCAAAGGCAA CTGAACGATTCGCTGATGTCGGCGGACAGCTTGTTTCTCGCGCTGGTGCAGGAGAAGAGC ATACGCGGCCTTCTCACCGAAGCGGGGTTCATGATGAAGCAGATCGAGGAGAAGGCGAAG AGCGTGCGCGGGTTGAGGAAGATTTCATCTTCGGACGACGACGCGAACTTTGAGGCACTG AAAAAGTACGGAACCGACTTCACAGACCTCGCCGAGAAGGGAAAGCTGGACCCGGTGATT GGGCGCGAAGACGAGATCCGACGCGTGATTCGCATTCTCTGTCGGCGGACGAAGAACAAC CCGGTGCTCATCGGCGAGCCGGGAGTGGGCAAAAGCGCGATCGTGGAGGGACTTGCGAGG CGCATCGTCGAGAACGACGTGCCGAGCAATCTGCGCTGCCGCCTCGTCTCCCTCGACGTT GGCGCCCTGATCTCCGGCGCCAAGTACCGCGGCGAGTTCGAGGAACGGCTGACCGCTGTC CTGAAGGAAGTCAAGGACGCAGCCGGGAAGGTGATTCTCTTCATCGACGAAATCCACGTC ATCCTGGGAGCCGGGAAAACCGAGGGCGCACTCGACGCGGCCAACCTCCTCAAACCCATG CTCGCAAGAGGCGAGCTGCGCTGCATCGGCGCCACGACGCTCGATGAGTACCGGAAACAC GTGGAGAAGGACGCGGCGTTCGAGCGACGATTTCAACAAGTCCACGTCCGGGAACCTTCG GTCCAGGCCACCATTTCCATTCTGCGTGGCCTAAAAGATCGCTACGCATCCCACCACGGA GTTCGGATTCTTGACTCCGCTCTCGTTGAAGCCGCTCAACTCGCTGACCGTTACATCACA GCTCGGTTTCTGCCCGACAAAGCCATTGACCTGATGGACGAAGCGTGCGCGATCGCGCGA GTGCAAGTCGACAGCAAACCCGAGGCTGTGGACGTGCTGGAGCGGCAAAAAGTGCAGCTT GAAGTGGAGGTTCTTGCGCTGGAGAAGGAGAAGGATCCTGCCTCTCAGAAGCGCCTGGCG GAGGTCCGGCAGCACCTGGGCGAGATCGCCGACGCGTTGCGTCCGCTGTATCTACAGTAC CAGCAAGAGAAAGGCCGAATCGACGAGCTCGGGAAGCTGGCTCAGAAGCAAGACGAACTG AAGGCGAAGATCGACCGGGCCCAGAGAGTCGGCGATCTCGACCTCGTAGCCGAGCTCCGC TTCGACGCCCTCCCCGGCGTGGAGGCGCGATTCAAAAAGCTGCAGGCGGAGCAGGAGGAG TACGAACGAACCCACAAACCGTTGCTTACCGAGGTCGTAGGTCCAGAGCAAATCGCAGAT GTCGTCCAGCGCTGGACCAACATTCCCGTCCACAAGTTGACGCAGACGGAAACCGAGCGT TTGCTGGCCTTCGGGAAGACCCTAGCCGAGCAAGTGATCGGCCAGCCGCAAGCTGTGGAG GCAGTGTCGCAGGCGATTCTGCGATCCGCCGCTGGACTCTCGAAACGCAATAAGCCGATC GGCAGCTTTCTCTTCCTCGGCCCGACTGGCGTGGGGAAGACTGAGCTGTGCAAGCGCGTC GCGGAGTCTCTGTTCGACACGAAAGAGCGCCTTGTACGCTTCGACATGAGCGAGTACATG GAGCAGCACTCGGTTTCGCGGCTCATTGGCGCGCCACCCGGCTACGTGGGGCACGACGAA GGCGGCCAGCTTACTGAGGAGATTCGCCGCAACCCCTACAGCGTGGTGCTGTTTGACGAA GTGGAGAAAGCCCACTCTCAGGTGTGGAACGTGCTGCTGCAAGTCCTCGACGACGGTCGC CTCACCGACAGCCAAGGCCGCACAGTCGACTTCTCCAACACCATCATTATCCTCACTTCC AACCTGGGTGCCGCCTTCCTCCTCGAGGCCGCGCAGCGTGTCGGCACTGAAGAGCAACTC GCCGCCGAAGCGGCGGCGAAGGAGATGGTCATGATGGAAGTGCGAAAATTCTTCAAACCA GAAATGCTGAATCGCCTTGACGACATTGTCATCTTCAAAGCCCTCACAAACGTCAATTTG CGTCAGGTGATGAACCTTCAAATGGAAGAAGTCCGGGAGCGTTTGGCTGAGAAGCGAATC GAACTGACGCTCACCGATCGCGCCACGGACCACGTCGTGCACGAGGCGTTCGATCCCGCC TATGGCGCACGACCTCTCAAGCGATTTGTTGAGCGGCATATTGTCTCTGACCTGTCCCTA AAACTTCTCAAAGGCGAGATTGTCCCGGATTCCCGCGTGCTGTGCGATTGGGACGAGAAG CGCCGCGCGTGGGTATGGGAGACGACGACGGCTGTCGAGTCGACTGCATCTGTGCGCAAA ACGCCAGGGCATCCTGTGGAGGCCGAGATGGATGCCGAGAGCTTGTCACCAGACTCCCGG ACGCTTTCCCTCGGAAGCCGCACCGATAGCTACACCAATCGGTCCTCGGCCATGCATGAG ACCAATGCGAAGAAATTCAGATACTAG
  • Download Fasta
  • Fasta :-

    MDADAWTTLVKKAFLAGQEVCRERRNPQLDPLHLFEAMLRDKQSFASQVLSQCPGDFAQL KEDVHRAVLKFPQQNPPPDFPSPNHALMAVLRHGKEIQRQLNDSLMSADSLFLALVQEKS IRGLLTEAGFMMKQIEEKAKSVRGLRKISSSDDDANFEALKKYGTDFTDLAEKGKLDPVI GREDEIRRVIRILCRRTKNNPVLIGEPGVGKSAIVEGLARRIVENDVPSNLRCRLVSLDV GALISGAKYRGEFEERLTAVLKEVKDAAGKVILFIDEIHVILGAGKTEGALDAANLLKPM LARGELRCIGATTLDEYRKHVEKDAAFERRFQQVHVREPSVQATISILRGLKDRYASHHG VRILDSALVEAAQLADRYITARFLPDKAIDLMDEACAIARVQVDSKPEAVDVLERQKVQL EVEVLALEKEKDPASQKRLAEVRQHLGEIADALRPLYLQYQQEKGRIDELGKLAQKQDEL KAKIDRAQRVGDLDLVAELRFDALPGVEARFKKLQAEQEEYERTHKPLLTEVVGPEQIAD VVQRWTNIPVHKLTQTETERLLAFGKTLAEQVIGQPQAVEAVSQAILRSAAGLSKRNKPI GSFLFLGPTGVGKTELCKRVAESLFDTKERLVRFDMSEYMEQHSVSRLIGAPPGYVGHDE GGQLTEEIRRNPYSVVLFDEVEKAHSQVWNVLLQVLDDGRLTDSQGRTVDFSNTIIILTS NLGAAFLLEAAQRVGTEEQLAAEAAAKEMVMMEVRKFFKPEMLNRLDDIVIFKALTNVNL RQVMNLQMEEVRERLAEKRIELTLTDRATDHVVHEAFDPAYGARPLKRFVERHIVSDLSL KLLKGEIVPDSRVLCDWDEKRRAWVWETTTAVESTASVRKTPGHPVEAEMDAESLSPDSR TLSLGSRTDSYTNRSSAMHETNAKKFRY

    No Results
  • title: ATP binding site
  • coordinates: E206,P207,G208,V209,G210,K211,S212,A213,D276,T313
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_028370151 SKISSSDDDA0.993unspNCLIV_028370151 SKISSSDDDA0.993unspNCLIV_028370151 SKISSSDDDA0.993unspNCLIV_028370435 SKDPASQKRL0.996unspNCLIV_028370623 SRVAESLFDT0.996unspNCLIV_028370906 SLSLGSRTDS0.994unspNCLIV_028370141 SEKAKSVRGL0.996unspNCLIV_028370149 SLRKISSSDD0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India