NCLIV_029840 | conserved hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_029840OTHER0.9999990.0000010.000000
No Results

  • Fasta :-

    >NCLIV_029840 MKQKRGHGREIEDTESSASSRSVVQDEYLASQRKASGFPGLTYSSASPAPERLLGPSPSP GTCAASEVLSRSPSHAKSLHAQHTAQPRAVAASERSSGASSDPVSCPSSDSLREEPAVVN PARGSPDAKAEAGSASHLSPQPPSADVRSRPPSTPGNGEPASPLLKFGDETLSWIQRQQM KLWSFFALRDWRVKTLVHALSAMGAPVDLIVVDCAQTSARATASSPPHRGGYSPVYHTVW LCGNCFWSPFELRRVLLHELVHAFDFARAEISPDNCRHVACTEIRAYNLSGQCSWWATKR WDEDQFQRIDPALLRPRGGASTRTGARQMLPEETSKGEGLYGGPAWENGPTRPEPAQAAA QSGEDRRDNEEGGEWRTSAPESRAGARTSPFFSGDGPLPWQDTKRNRCLVHNALNSLRDH QQCKAPGLAEVAITDVFQRCLRDTWPFMAPPERDSKWRPSRIWRDGSSDFFKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_029840.fa Sequence name : NCLIV_029840 Sequence length : 473 VALUES OF COMPUTED PARAMETERS Coef20 : 3.402 CoefTot : -0.850 ChDiff : 4 ZoneTo : 9 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.135 1.794 0.140 0.631 MesoH : -0.262 0.327 -0.288 0.210 MuHd_075 : 20.199 8.580 3.304 4.625 MuHd_095 : 22.878 9.165 3.667 5.749 MuHd_100 : 27.995 12.774 4.924 6.267 MuHd_105 : 30.207 14.490 5.477 5.988 Hmax_075 : -9.888 -5.425 -5.773 -0.420 Hmax_095 : -14.525 -5.700 -6.625 -0.245 Hmax_100 : -8.800 -2.800 -5.409 0.500 Hmax_105 : -1.500 0.000 -3.734 1.190 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9215 0.0785 DFMC : 0.9552 0.0448
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 473 NCLIV_029840 MKQKRGHGREIEDTESSASSRSVVQDEYLASQRKASGFPGLTYSSASPAPERLLGPSPSPGTCAASEVLSRSPSHAKSLH 80 AQHTAQPRAVAASERSSGASSDPVSCPSSDSLREEPAVVNPARGSPDAKAEAGSASHLSPQPPSADVRSRPPSTPGNGEP 160 ASPLLKFGDETLSWIQRQQMKLWSFFALRDWRVKTLVHALSAMGAPVDLIVVDCAQTSARATASSPPHRGGYSPVYHTVW 240 LCGNCFWSPFELRRVLLHELVHAFDFARAEISPDNCRHVACTEIRAYNLSGQCSWWATKRWDEDQFQRIDPALLRPRGGA 320 STRTGARQMLPEETSKGEGLYGGPAWENGPTRPEPAQAAAQSGEDRRDNEEGGEWRTSAPESRAGARTSPFFSGDGPLPW 400 QDTKRNRCLVHNALNSLRDHQQCKAPGLAEVAITDVFQRCLRDTWPFMAPPERDSKWRPSRIWRDGSSDFFKK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...............................................................P......... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_029840 2 -----MK|QK 0.071 . NCLIV_029840 4 ---MKQK|RG 0.063 . NCLIV_029840 5 --MKQKR|GH 0.333 . NCLIV_029840 9 QKRGHGR|EI 0.207 . NCLIV_029840 21 ESSASSR|SV 0.315 . NCLIV_029840 33 EYLASQR|KA 0.088 . NCLIV_029840 34 YLASQRK|AS 0.092 . NCLIV_029840 52 ASPAPER|LL 0.097 . NCLIV_029840 71 ASEVLSR|SP 0.124 . NCLIV_029840 77 RSPSHAK|SL 0.132 . NCLIV_029840 88 QHTAQPR|AV 0.188 . NCLIV_029840 95 AVAASER|SS 0.201 . NCLIV_029840 113 PSSDSLR|EE 0.093 . NCLIV_029840 123 AVVNPAR|GS 0.112 . NCLIV_029840 129 RGSPDAK|AE 0.074 . NCLIV_029840 148 PPSADVR|SR 0.157 . NCLIV_029840 150 SADVRSR|PP 0.117 . NCLIV_029840 166 PASPLLK|FG 0.073 . NCLIV_029840 177 TLSWIQR|QQ 0.106 . NCLIV_029840 181 IQRQQMK|LW 0.064 . NCLIV_029840 189 WSFFALR|DW 0.103 . NCLIV_029840 192 FALRDWR|VK 0.133 . NCLIV_029840 194 LRDWRVK|TL 0.069 . NCLIV_029840 220 CAQTSAR|AT 0.122 . NCLIV_029840 229 ASSPPHR|GG 0.102 . NCLIV_029840 253 WSPFELR|RV 0.092 . NCLIV_029840 254 SPFELRR|VL 0.141 . NCLIV_029840 268 HAFDFAR|AE 0.081 . NCLIV_029840 277 ISPDNCR|HV 0.104 . NCLIV_029840 285 VACTEIR|AY 0.090 . NCLIV_029840 299 CSWWATK|RW 0.065 . NCLIV_029840 300 SWWATKR|WD 0.284 . NCLIV_029840 308 DEDQFQR|ID 0.073 . NCLIV_029840 315 IDPALLR|PR 0.077 . NCLIV_029840 317 PALLRPR|GG 0.076 . NCLIV_029840 323 RGGASTR|TG 0.083 . NCLIV_029840 327 STRTGAR|QM 0.104 . NCLIV_029840 336 LPEETSK|GE 0.067 . NCLIV_029840 352 WENGPTR|PE 0.093 . NCLIV_029840 366 AQSGEDR|RD 0.097 . NCLIV_029840 367 QSGEDRR|DN 0.286 . NCLIV_029840 376 EEGGEWR|TS 0.081 . NCLIV_029840 383 TSAPESR|AG 0.088 . NCLIV_029840 387 ESRAGAR|TS 0.077 . NCLIV_029840 404 LPWQDTK|RN 0.061 . NCLIV_029840 405 PWQDTKR|NR 0.170 . NCLIV_029840 407 QDTKRNR|CL 0.084 . NCLIV_029840 418 NALNSLR|DH 0.087 . NCLIV_029840 424 RDHQQCK|AP 0.085 . NCLIV_029840 439 ITDVFQR|CL 0.097 . NCLIV_029840 442 VFQRCLR|DT 0.237 . NCLIV_029840 453 FMAPPER|DS 0.093 . NCLIV_029840 456 PPERDSK|WR 0.081 . NCLIV_029840 458 ERDSKWR|PS 0.124 . NCLIV_029840 461 SKWRPSR|IW 0.391 . NCLIV_029840 464 RPSRIWR|DG 0.514 *ProP* NCLIV_029840 472 GSSDFFK|K- 0.083 . NCLIV_029840 473 SSDFFKK|-- 0.124 . ____________________________^_________________

  • Fasta :-

    >NCLIV_029840 ATGAAGCAGAAGCGTGGACACGGCCGCGAAATCGAGGACACAGAGAGCTCCGCTTCCTCT CGGAGTGTCGTTCAAGACGAATACCTCGCTTCCCAAAGGAAGGCCTCCGGCTTCCCTGGA CTTACGTATTCTTCCGCTTCGCCTGCTCCAGAGCGTCTTTTGGGTCCGTCTCCGTCGCCG GGCACTTGCGCAGCTTCAGAGGTACTCTCTCGGTCCCCTTCACACGCAAAATCTCTGCAT GCCCAGCACACGGCGCAACCCCGAGCTGTCGCGGCCTCAGAGCGCTCATCAGGTGCGTCG TCCGACCCTGTGTCCTGTCCTTCCTCTGATTCCCTTCGCGAGGAGCCCGCGGTGGTGAAC CCAGCGCGGGGCTCTCCAGACGCGAAAGCCGAGGCGGGAAGTGCTTCCCACCTTTCTCCG CAGCCGCCGTCTGCAGACGTGCGAAGCCGCCCGCCGTCCACACCGGGAAACGGAGAGCCC GCGTCCCCGCTTCTCAAGTTTGGCGATGAGACTCTCTCTTGGATCCAGCGCCAGCAAATG AAGTTGTGGAGCTTCTTTGCTCTCCGGGACTGGCGGGTCAAGACGCTCGTCCACGCCCTC TCTGCGATGGGCGCTCCGGTCGACCTAATTGTCGTGGACTGCGCACAAACGTCGGCCCGC GCGACGGCGTCTTCCCCTCCACATCGAGGCGGCTACTCGCCAGTCTACCACACGGTGTGG TTATGCGGCAACTGCTTCTGGTCCCCCTTTGAACTGCGTCGCGTCCTGCTGCACGAGCTC GTGCATGCGTTCGATTTCGCGCGGGCGGAAATCTCGCCCGACAATTGCAGGCACGTTGCG TGCACGGAGATTCGCGCGTACAACCTGAGCGGCCAGTGCAGTTGGTGGGCGACGAAGCGA TGGGACGAAGACCAGTTTCAACGCATCGATCCTGCCTTGCTCAGACCGCGAGGCGGCGCC TCGACGAGGACGGGCGCGAGACAAATGCTTCCCGAAGAGACGAGCAAAGGGGAAGGCCTT TACGGAGGGCCTGCGTGGGAAAACGGCCCGACCAGGCCAGAGCCGGCACAGGCGGCGGCA CAGAGCGGAGAAGATCGAAGGGACAACGAGGAAGGAGGCGAGTGGCGAACATCAGCCCCG GAGTCCAGAGCGGGAGCGAGAACGTCGCCTTTCTTTTCAGGGGACGGACCTTTGCCCTGG CAAGATACCAAACGCAATCGCTGTCTCGTCCACAACGCTTTGAACTCACTTCGAGACCAC CAACAGTGCAAAGCCCCGGGCCTGGCGGAAGTCGCAATTACGGACGTATTCCAGCGGTGT CTGAGGGACACGTGGCCCTTCATGGCACCTCCAGAACGAGACAGCAAGTGGCGACCTTCT CGCATATGGCGTGACGGTTCGTCTGATTTTTTCAAGAAATAA
  • Download Fasta

  • Fasta :-

    MKQKRGHGREIEDTESSASSRSVVQDEYLASQRKASGFPGLTYSSASPAPERLLGPSPSP GTCAASEVLSRSPSHAKSLHAQHTAQPRAVAASERSSGASSDPVSCPSSDSLREEPAVVN PARGSPDAKAEAGSASHLSPQPPSADVRSRPPSTPGNGEPASPLLKFGDETLSWIQRQQM KLWSFFALRDWRVKTLVHALSAMGAPVDLIVVDCAQTSARATASSPPHRGGYSPVYHTVW LCGNCFWSPFELRRVLLHELVHAFDFARAEISPDNCRHVACTEIRAYNLSGQCSWWATKR WDEDQFQRIDPALLRPRGGASTRTGARQMLPEETSKGEGLYGGPAWENGPTRPEPAQAAA QSGEDRRDNEEGGEWRTSAPESRAGARTSPFFSGDGPLPWQDTKRNRCLVHNALNSLRDH QQCKAPGLAEVAITDVFQRCLRDTWPFMAPPERDSKWRPSRIWRDGSSDFFKK

    No Results
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_029840111 SPSSDSLREE0.993unspNCLIV_029840111 SPSSDSLREE0.993unspNCLIV_029840111 SPSSDSLREE0.993unspNCLIV_029840153 SSRPPSTPGN0.994unspNCLIV_029840362 SAAAQSGEDR0.992unspNCLIV_029840378 SEWRTSAPES0.996unspNCLIV_02984047 SYSSASPAPE0.993unspNCLIV_02984097 SSERSSGASS0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India