NCLIV_029950 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_029950OTHER0.9993960.0000140.000590
No Results

  • Fasta :-

    >NCLIV_029950 MFNPKYEEREAHAVNSEHEKNIPNDEERTWLTIRSLAKGPLSRFATGNLETLSTAPKRKG INVVVRLKDFHRKYYCASNMPNPAAMNEVARLAHNLLTYEPYHVLAGDVLLADPDATFVN QLLAKMTPEHAIVAFSDPQFRRNTESFDVEPFYGVEFKINDLPKEQLMALKSVTPAPGTY KVPPALKHVPRPEDLHLRPNIGGMSIPELLGESNTSGGHSVWWQGQGTLPVPRVHANIKA RTARNQTNMKSRTQATLLMEAIGEQLDEATVDLKQCGISHSAGVSGDGLYLTFAAYTPQQ LRQVMAVVASQIKDPRVEQDRFTRIKQRMIEELEDSASQVAYEHAIAAASVLLRNDANSR KDLLRVLKSDSTSLNETLKTFSDLKSVHADAFIMGNIDKSEATEIVQSFLQDSGFIPIPM KEAAQSLVVEQKAPIEALIANPIPNDVNHATVVQYQLGVPSIEERVNLAVLSQMLNRRLF DRLRTQEQLGYIVGANAYIDSSVESLRCVLEGSRKHPDEVADLIEKELREMDDHIQSLSD GELEHWKEATRAELEKPTETFYEEFGRSWSQIANHGHCFNKRELELIYLKTNFNRKQLSR TYAKLLAPTSRLVSSLS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_029950.fa Sequence name : NCLIV_029950 Sequence length : 617 VALUES OF COMPUTED PARAMETERS Coef20 : 2.796 CoefTot : -0.657 ChDiff : -10 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.747 1.071 0.020 0.469 MesoH : -0.666 0.262 -0.444 0.219 MuHd_075 : 16.464 7.484 4.297 3.233 MuHd_095 : 3.907 5.630 0.703 2.474 MuHd_100 : 3.547 3.230 1.294 2.078 MuHd_105 : 3.160 3.461 2.224 2.488 Hmax_075 : -9.450 -5.075 -5.905 0.577 Hmax_095 : -10.600 -5.425 -6.786 0.455 Hmax_100 : -14.000 -3.000 -5.843 0.920 Hmax_105 : -11.783 -3.900 -5.306 0.600 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9791 0.0209 DFMC : 0.9782 0.0218
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 617 NCLIV_029950 MFNPKYEEREAHAVNSEHEKNIPNDEERTWLTIRSLAKGPLSRFATGNLETLSTAPKRKGINVVVRLKDFHRKYYCASNM 80 PNPAAMNEVARLAHNLLTYEPYHVLAGDVLLADPDATFVNQLLAKMTPEHAIVAFSDPQFRRNTESFDVEPFYGVEFKIN 160 DLPKEQLMALKSVTPAPGTYKVPPALKHVPRPEDLHLRPNIGGMSIPELLGESNTSGGHSVWWQGQGTLPVPRVHANIKA 240 RTARNQTNMKSRTQATLLMEAIGEQLDEATVDLKQCGISHSAGVSGDGLYLTFAAYTPQQLRQVMAVVASQIKDPRVEQD 320 RFTRIKQRMIEELEDSASQVAYEHAIAAASVLLRNDANSRKDLLRVLKSDSTSLNETLKTFSDLKSVHADAFIMGNIDKS 400 EATEIVQSFLQDSGFIPIPMKEAAQSLVVEQKAPIEALIANPIPNDVNHATVVQYQLGVPSIEERVNLAVLSQMLNRRLF 480 DRLRTQEQLGYIVGANAYIDSSVESLRCVLEGSRKHPDEVADLIEKELREMDDHIQSLSDGELEHWKEATRAELEKPTET 560 FYEEFGRSWSQIANHGHCFNKRELELIYLKTNFNRKQLSRTYAKLLAPTSRLVSSLS 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ......................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ NCLIV_029950 5 --MFNPK|YE 0.072 . NCLIV_029950 9 NPKYEER|EA 0.150 . NCLIV_029950 20 VNSEHEK|NI 0.074 . NCLIV_029950 28 IPNDEER|TW 0.105 . NCLIV_029950 34 RTWLTIR|SL 0.137 . NCLIV_029950 38 TIRSLAK|GP 0.066 . NCLIV_029950 43 AKGPLSR|FA 0.152 . NCLIV_029950 57 TLSTAPK|RK 0.075 . NCLIV_029950 58 LSTAPKR|KG 0.146 . NCLIV_029950 59 STAPKRK|GI 0.138 . NCLIV_029950 66 GINVVVR|LK 0.109 . NCLIV_029950 68 NVVVRLK|DF 0.065 . NCLIV_029950 72 RLKDFHR|KY 0.091 . NCLIV_029950 73 LKDFHRK|YY 0.110 . NCLIV_029950 91 AMNEVAR|LA 0.146 . NCLIV_029950 125 VNQLLAK|MT 0.066 . NCLIV_029950 141 FSDPQFR|RN 0.088 . NCLIV_029950 142 SDPQFRR|NT 0.148 . NCLIV_029950 158 FYGVEFK|IN 0.062 . NCLIV_029950 164 KINDLPK|EQ 0.075 . NCLIV_029950 171 EQLMALK|SV 0.114 . NCLIV_029950 181 PAPGTYK|VP 0.055 . NCLIV_029950 187 KVPPALK|HV 0.067 . NCLIV_029950 191 ALKHVPR|PE 0.102 . NCLIV_029950 198 PEDLHLR|PN 0.089 . NCLIV_029950 233 GTLPVPR|VH 0.071 . NCLIV_029950 239 RVHANIK|AR 0.065 . NCLIV_029950 241 HANIKAR|TA 0.204 . NCLIV_029950 244 IKARTAR|NQ 0.297 . NCLIV_029950 250 RNQTNMK|SR 0.084 . NCLIV_029950 252 QTNMKSR|TQ 0.119 . NCLIV_029950 274 EATVDLK|QC 0.063 . NCLIV_029950 302 YTPQQLR|QV 0.128 . NCLIV_029950 313 VVASQIK|DP 0.067 . NCLIV_029950 316 SQIKDPR|VE 0.081 . NCLIV_029950 321 PRVEQDR|FT 0.146 . NCLIV_029950 324 EQDRFTR|IK 0.178 . NCLIV_029950 326 DRFTRIK|QR 0.070 . NCLIV_029950 328 FTRIKQR|MI 0.167 . NCLIV_029950 354 AASVLLR|ND 0.096 . NCLIV_029950 360 RNDANSR|KD 0.061 . NCLIV_029950 361 NDANSRK|DL 0.119 . NCLIV_029950 365 SRKDLLR|VL 0.083 . NCLIV_029950 368 DLLRVLK|SD 0.203 . NCLIV_029950 379 SLNETLK|TF 0.070 . NCLIV_029950 385 KTFSDLK|SV 0.091 . NCLIV_029950 399 IMGNIDK|SE 0.083 . NCLIV_029950 421 FIPIPMK|EA 0.070 . NCLIV_029950 432 SLVVEQK|AP 0.072 . NCLIV_029950 465 VPSIEER|VN 0.115 . NCLIV_029950 477 LSQMLNR|RL 0.113 . NCLIV_029950 478 SQMLNRR|LF 0.147 . NCLIV_029950 482 NRRLFDR|LR 0.108 . NCLIV_029950 484 RLFDRLR|TQ 0.086 . NCLIV_029950 507 SSVESLR|CV 0.114 . NCLIV_029950 514 CVLEGSR|KH 0.061 . NCLIV_029950 515 VLEGSRK|HP 0.081 . NCLIV_029950 526 VADLIEK|EL 0.057 . NCLIV_029950 529 LIEKELR|EM 0.099 . NCLIV_029950 547 GELEHWK|EA 0.071 . NCLIV_029950 551 HWKEATR|AE 0.072 . NCLIV_029950 556 TRAELEK|PT 0.088 . NCLIV_029950 567 FYEEFGR|SW 0.191 . NCLIV_029950 581 HGHCFNK|RE 0.058 . NCLIV_029950 582 GHCFNKR|EL 0.172 . NCLIV_029950 590 LELIYLK|TN 0.053 . NCLIV_029950 595 LKTNFNR|KQ 0.073 . NCLIV_029950 596 KTNFNRK|QL 0.089 . NCLIV_029950 600 NRKQLSR|TY 0.095 . NCLIV_029950 604 LSRTYAK|LL 0.065 . NCLIV_029950 611 LLAPTSR|LV 0.114 . ____________________________^_________________

  • Fasta :-

    >NCLIV_029950 ATGTTCAACCCCAAGTACGAAGAAAGGGAGGCGCATGCAGTTAACTCTGAACACGAGAAG AATATCCCGAACGACGAGGAGAGAACCTGGCTTACGATCCGTTCGCTTGCCAAGGGGCCG CTCTCCAGATTCGCAACAGGAAATCTCGAAACGCTAAGCACAGCTCCGAAGCGAAAAGGC ATTAATGTCGTCGTTCGTCTTAAAGATTTCCACAGAAAGTATTACTGTGCGTCGAACATG CCCAATCCAGCTGCGATGAATGAGGTGGCGCGCCTGGCGCATAATCTTCTCACCTATGAA CCGTACCACGTTCTCGCTGGTGACGTTCTGCTAGCGGACCCTGATGCCACATTTGTTAAC CAGCTGCTGGCTAAAATGACTCCAGAGCATGCAATCGTAGCTTTCTCAGACCCTCAGTTC AGGCGGAATACGGAGTCATTCGATGTTGAACCGTTTTACGGTGTTGAGTTCAAGATCAAT GACCTACCAAAGGAACAGCTGATGGCCCTTAAATCAGTGACACCAGCACCGGGAACCTAC AAAGTTCCACCAGCACTAAAACACGTTCCTCGTCCAGAAGATCTCCATCTGCGACCGAAC ATTGGTGGAATGTCGATTCCTGAGCTTCTGGGCGAGAGTAACACATCTGGAGGTCATTCC GTTTGGTGGCAAGGCCAAGGGACTCTACCGGTGCCACGAGTACATGCCAACATAAAAGCG AGAACAGCCCGAAACCAGACGAACATGAAATCAAGGACACAAGCGACATTGTTGATGGAG GCCATCGGAGAGCAGCTGGACGAGGCAACAGTCGATTTGAAACAATGCGGTATCTCTCAC AGCGCTGGAGTATCTGGCGACGGCCTCTATTTGACGTTTGCTGCGTACACGCCGCAGCAA CTCCGCCAGGTGATGGCGGTTGTCGCCTCACAAATCAAAGATCCGCGCGTAGAGCAGGAC CGTTTTACTCGAATCAAGCAGAGGATGATTGAGGAATTGGAGGACTCCGCTTCTCAGGTC GCATATGAGCATGCTATTGCAGCTGCATCCGTTTTGCTTAGGAACGACGCTAACAGCCGA AAGGATCTTCTACGCGTGCTCAAAAGTGACTCCACGTCGCTAAACGAGACCCTCAAGACA TTCAGTGACCTCAAATCAGTCCACGCGGACGCGTTTATTATGGGCAACATCGATAAATCG GAAGCTACGGAGATTGTCCAGTCTTTTCTCCAGGATTCTGGATTCATACCAATACCGATG AAAGAGGCCGCGCAGTCACTTGTCGTGGAGCAAAAGGCGCCGATTGAGGCTCTGATTGCC AATCCCATCCCCAACGACGTTAACCACGCGACCGTAGTGCAGTACCAACTTGGCGTCCCT TCTATTGAAGAAAGGGTCAATCTTGCTGTGTTGAGCCAAATGCTTAATCGAAGACTCTTT GATCGTCTCCGAACGCAGGAGCAGCTCGGCTATATTGTCGGGGCGAATGCGTACATCGAT TCATCTGTCGAAAGCTTGCGTTGCGTGTTGGAGGGGTCAAGAAAGCATCCAGACGAGGTT GCTGACCTTATTGAGAAGGAACTGCGAGAGATGGATGACCATATTCAATCATTATCAGAC GGGGAGCTTGAACACTGGAAAGAGGCAACTCGAGCCGAACTCGAGAAACCGACGGAAACA TTTTATGAGGAGTTCGGCCGGTCCTGGAGCCAGATTGCTAACCACGGGCATTGTTTCAAT AAGCGCGAACTTGAACTGATATACTTAAAAACAAATTTCAACCGAAAGCAACTGAGCCGG ACTTACGCGAAACTGCTCGCACCCACAAGCCGGCTTGTAAGCTCCCTGTCCTGA
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  • Fasta :-

    MFNPKYEEREAHAVNSEHEKNIPNDEERTWLTIRSLAKGPLSRFATGNLETLSTAPKRKG INVVVRLKDFHRKYYCASNMPNPAAMNEVARLAHNLLTYEPYHVLAGDVLLADPDATFVN QLLAKMTPEHAIVAFSDPQFRRNTESFDVEPFYGVEFKINDLPKEQLMALKSVTPAPGTY KVPPALKHVPRPEDLHLRPNIGGMSIPELLGESNTSGGHSVWWQGQGTLPVPRVHANIKA RTARNQTNMKSRTQATLLMEAIGEQLDEATVDLKQCGISHSAGVSGDGLYLTFAAYTPQQ LRQVMAVVASQIKDPRVEQDRFTRIKQRMIEELEDSASQVAYEHAIAAASVLLRNDANSR KDLLRVLKSDSTSLNETLKTFSDLKSVHADAFIMGNIDKSEATEIVQSFLQDSGFIPIPM KEAAQSLVVEQKAPIEALIANPIPNDVNHATVVQYQLGVPSIEERVNLAVLSQMLNRRLF DRLRTQEQLGYIVGANAYIDSSVESLRCVLEGSRKHPDEVADLIEKELREMDDHIQSLSD GELEHWKEATRAELEKPTETFYEEFGRSWSQIANHGHCFNKRELELIYLKTNFNRKQLSR TYAKLLAPTSRLVSSLS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_029950359 SNDANSRKDL0.998unspNCLIV_029950373 SSDSTSLNET0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India