NCLIV_030520 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
NCLIV_030520OTHER0.9999980.0000010.000001
No Results

  • Fasta :-

    >NCLIV_030520 MGSKKKNTRGRQAVRGKSAKERRQESDREDCQGDRREKKGKGTRSAPLASSFASHLEAYG LELELIAPDGNCLFRAFADQHCGEQERHREYREKAVDYIEAHAEDFKCFLAEEEESFKKY VSRMRRLGTWGSQMELQALSQVYQVSLFIHVANAPGEDAPWHGMAGGHRGRKQQGKKKGR AVEKGGKKRNLRRDRGREEDDAEDVEREESCEAETTHEPGEEQDWSICKMENFSEAQPCV QLAFHVHHEHYNSIRVRGRAPGAMLSLAQVRRVLKLSVDGDEEASECAEATTDGEAAAAE EEAGEGVKREFLEQPRKEACAGEGESHEACDETQAEEAAERQETRAKEDTGEEGDRENRR APDAETETQGAKTGENGAGVCTLGQPAAEASGSCVRADGRLSPADGGTPSDGGVEEHEEC RGRAEDAPSDSEKEQSREEDTLEEENAAKEKDGTASEEDTRDDTRNETTAPLLENEETAE KAPEGGEQETGASEESGARKRGKEKTMRGKDRPDSTAPRSGSSTKEGEASSASDERGRRD TEPQHVPCSLSSSSSSSLPAAASSSSSGSPSSSSVCSPFSAPSAASCASSASSPPSSSSA PSSASPAWSAPSCSSSAASLKVPAVGGCVSAASRCAKVRRSRSTGSLRRRRWEREEALLC SSRLCFLRPSSEAPRVSDSALPEKETAGEHAEASRETHPASGFPSCGASRRGSRRAQRIG GDTSSSSLSRAPLLPGDSGKMHASSANPANAEGVCAVFFPRRVLRRNSLRGCCGASCSPS RSLFGPSSWVRETCETRAQLTASPGNQSASPDAADSPPLRSSLLCACASASCAHGSPPST FPGLSATRCSSEALPNGDEETGEEKDERETRASPLVCV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/NCLIV_030520.fa Sequence name : NCLIV_030520 Sequence length : 878 VALUES OF COMPUTED PARAMETERS Coef20 : 3.971 CoefTot : -0.693 ChDiff : -30 ZoneTo : 20 KR : 8 DE : 0 CleavSite : 17 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.265 1.129 0.274 0.435 MesoH : 0.930 0.277 0.062 0.201 MuHd_075 : 28.341 12.519 6.521 4.547 MuHd_095 : 16.632 9.796 5.445 3.428 MuHd_100 : 13.398 6.752 3.288 3.714 MuHd_105 : 16.437 7.549 3.663 4.345 Hmax_075 : -11.288 -2.100 -4.210 -1.811 Hmax_095 : -11.200 -3.800 -5.082 -0.595 Hmax_100 : -10.800 -3.400 -6.951 -0.500 Hmax_105 : -9.100 -3.033 -4.614 -0.303 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9041 0.0959 DFMC : 0.7466 0.2534
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 878 NCLIV_030520 MGSKKKNTRGRQAVRGKSAKERRQESDREDCQGDRREKKGKGTRSAPLASSFASHLEAYGLELELIAPDGNCLFRAFADQ 80 HCGEQERHREYREKAVDYIEAHAEDFKCFLAEEEESFKKYVSRMRRLGTWGSQMELQALSQVYQVSLFIHVANAPGEDAP 160 WHGMAGGHRGRKQQGKKKGRAVEKGGKKRNLRRDRGREEDDAEDVEREESCEAETTHEPGEEQDWSICKMENFSEAQPCV 240 QLAFHVHHEHYNSIRVRGRAPGAMLSLAQVRRVLKLSVDGDEEASECAEATTDGEAAAAEEEAGEGVKREFLEQPRKEAC 320 AGEGESHEACDETQAEEAAERQETRAKEDTGEEGDRENRRAPDAETETQGAKTGENGAGVCTLGQPAAEASGSCVRADGR 400 LSPADGGTPSDGGVEEHEECRGRAEDAPSDSEKEQSREEDTLEEENAAKEKDGTASEEDTRDDTRNETTAPLLENEETAE 480 KAPEGGEQETGASEESGARKRGKEKTMRGKDRPDSTAPRSGSSTKEGEASSASDERGRRDTEPQHVPCSLSSSSSSSLPA 560 AASSSSSGSPSSSSVCSPFSAPSAASCASSASSPPSSSSAPSSASPAWSAPSCSSSAASLKVPAVGGCVSAASRCAKVRR 640 SRSTGSLRRRRWEREEALLCSSRLCFLRPSSEAPRVSDSALPEKETAGEHAEASRETHPASGFPSCGASRRGSRRAQRIG 720 GDTSSSSLSRAPLLPGDSGKMHASSANPANAEGVCAVFFPRRVLRRNSLRGCCGASCSPSRSLFGPSSWVRETCETRAQL 800 TASPGNQSASPDAADSPPLRSSLLCACASASCAHGSPPSTFPGLSATRCSSEALPNGDEETGEEKDERETRASPLVCV 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..........................................................P..................... 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 .............................................................................. 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ NCLIV_030520 4 ---MGSK|KK 0.059 . NCLIV_030520 5 --MGSKK|KN 0.118 . NCLIV_030520 6 -MGSKKK|NT 0.108 . NCLIV_030520 9 SKKKNTR|GR 0.112 . NCLIV_030520 11 KKNTRGR|QA 0.160 . NCLIV_030520 15 RGRQAVR|GK 0.138 . NCLIV_030520 17 RQAVRGK|SA 0.108 . NCLIV_030520 20 VRGKSAK|ER 0.085 . NCLIV_030520 22 GKSAKER|RQ 0.120 . NCLIV_030520 23 KSAKERR|QE 0.270 . NCLIV_030520 28 RRQESDR|ED 0.137 . NCLIV_030520 35 EDCQGDR|RE 0.072 . NCLIV_030520 36 DCQGDRR|EK 0.112 . NCLIV_030520 38 QGDRREK|KG 0.088 . NCLIV_030520 39 GDRREKK|GK 0.414 . NCLIV_030520 41 RREKKGK|GT 0.097 . NCLIV_030520 44 KKGKGTR|SA 0.119 . NCLIV_030520 75 DGNCLFR|AF 0.109 . NCLIV_030520 87 HCGEQER|HR 0.096 . NCLIV_030520 89 GEQERHR|EY 0.095 . NCLIV_030520 92 ERHREYR|EK 0.299 . NCLIV_030520 94 HREYREK|AV 0.141 . NCLIV_030520 107 AHAEDFK|CF 0.068 . NCLIV_030520 118 EEEESFK|KY 0.055 . NCLIV_030520 119 EEESFKK|YV 0.160 . NCLIV_030520 123 FKKYVSR|MR 0.105 . NCLIV_030520 125 KYVSRMR|RL 0.110 . NCLIV_030520 126 YVSRMRR|LG 0.485 . NCLIV_030520 169 GMAGGHR|GR 0.100 . NCLIV_030520 171 AGGHRGR|KQ 0.084 . NCLIV_030520 172 GGHRGRK|QQ 0.293 . NCLIV_030520 176 GRKQQGK|KK 0.094 . NCLIV_030520 177 RKQQGKK|KG 0.123 . NCLIV_030520 178 KQQGKKK|GR 0.110 . NCLIV_030520 180 QGKKKGR|AV 0.275 . NCLIV_030520 184 KGRAVEK|GG 0.064 . NCLIV_030520 187 AVEKGGK|KR 0.052 . NCLIV_030520 188 VEKGGKK|RN 0.066 . NCLIV_030520 189 EKGGKKR|NL 0.202 . NCLIV_030520 192 GKKRNLR|RD 0.205 . NCLIV_030520 193 KKRNLRR|DR 0.325 . NCLIV_030520 195 RNLRRDR|GR 0.210 . NCLIV_030520 197 LRRDRGR|EE 0.181 . NCLIV_030520 207 DAEDVER|EE 0.093 . NCLIV_030520 229 QDWSICK|ME 0.065 . NCLIV_030520 255 EHYNSIR|VR 0.106 . NCLIV_030520 257 YNSIRVR|GR 0.129 . NCLIV_030520 259 SIRVRGR|AP 0.138 . NCLIV_030520 271 LSLAQVR|RV 0.088 . NCLIV_030520 272 SLAQVRR|VL 0.146 . NCLIV_030520 275 QVRRVLK|LS 0.120 . NCLIV_030520 308 EAGEGVK|RE 0.055 . NCLIV_030520 309 AGEGVKR|EF 0.157 . NCLIV_030520 316 EFLEQPR|KE 0.073 . NCLIV_030520 317 FLEQPRK|EA 0.111 . NCLIV_030520 341 AEEAAER|QE 0.077 . NCLIV_030520 345 AERQETR|AK 0.127 . NCLIV_030520 347 RQETRAK|ED 0.071 . NCLIV_030520 356 TGEEGDR|EN 0.090 . NCLIV_030520 359 EGDRENR|RA 0.226 . NCLIV_030520 360 GDRENRR|AP 0.202 . NCLIV_030520 372 TETQGAK|TG 0.061 . NCLIV_030520 396 ASGSCVR|AD 0.086 . NCLIV_030520 400 CVRADGR|LS 0.081 . NCLIV_030520 421 EEHEECR|GR 0.077 . NCLIV_030520 423 HEECRGR|AE 0.089 . NCLIV_030520 433 APSDSEK|EQ 0.110 . NCLIV_030520 437 SEKEQSR|EE 0.096 . NCLIV_030520 449 EEENAAK|EK 0.061 . NCLIV_030520 451 ENAAKEK|DG 0.094 . NCLIV_030520 461 ASEEDTR|DD 0.104 . NCLIV_030520 465 DTRDDTR|NE 0.077 . NCLIV_030520 481 NEETAEK|AP 0.062 . NCLIV_030520 499 SEESGAR|KR 0.091 . NCLIV_030520 500 EESGARK|RG 0.083 . NCLIV_030520 501 ESGARKR|GK 0.279 . NCLIV_030520 503 GARKRGK|EK 0.076 . NCLIV_030520 505 RKRGKEK|TM 0.067 . NCLIV_030520 508 GKEKTMR|GK 0.104 . NCLIV_030520 510 EKTMRGK|DR 0.066 . NCLIV_030520 512 TMRGKDR|PD 0.183 . NCLIV_030520 519 PDSTAPR|SG 0.140 . NCLIV_030520 525 RSGSSTK|EG 0.072 . NCLIV_030520 536 SSASDER|GR 0.143 . NCLIV_030520 538 ASDERGR|RD 0.079 . NCLIV_030520 539 SDERGRR|DT 0.631 *ProP* NCLIV_030520 621 SSAASLK|VP 0.067 . NCLIV_030520 634 CVSAASR|CA 0.091 . NCLIV_030520 637 AASRCAK|VR 0.126 . NCLIV_030520 639 SRCAKVR|RS 0.105 . NCLIV_030520 640 RCAKVRR|SR 0.374 . NCLIV_030520 642 AKVRRSR|ST 0.497 . NCLIV_030520 648 RSTGSLR|RR 0.076 . NCLIV_030520 649 STGSLRR|RR 0.107 . NCLIV_030520 650 TGSLRRR|RW 0.255 . NCLIV_030520 651 GSLRRRR|WE 0.341 . NCLIV_030520 654 RRRRWER|EE 0.197 . NCLIV_030520 663 ALLCSSR|LC 0.069 . NCLIV_030520 668 SRLCFLR|PS 0.112 . NCLIV_030520 675 PSSEAPR|VS 0.119 . NCLIV_030520 684 DSALPEK|ET 0.064 . NCLIV_030520 695 EHAEASR|ET 0.098 . NCLIV_030520 710 PSCGASR|RG 0.069 . NCLIV_030520 711 SCGASRR|GS 0.214 . NCLIV_030520 714 ASRRGSR|RA 0.294 . NCLIV_030520 715 SRRGSRR|AQ 0.324 . NCLIV_030520 718 GSRRAQR|IG 0.322 . NCLIV_030520 730 SSSSLSR|AP 0.089 . NCLIV_030520 740 LPGDSGK|MH 0.068 . NCLIV_030520 761 CAVFFPR|RV 0.086 . NCLIV_030520 762 AVFFPRR|VL 0.093 . NCLIV_030520 765 FPRRVLR|RN 0.236 . NCLIV_030520 766 PRRVLRR|NS 0.164 . NCLIV_030520 770 LRRNSLR|GC 0.124 . NCLIV_030520 781 ASCSPSR|SL 0.122 . NCLIV_030520 791 GPSSWVR|ET 0.129 . NCLIV_030520 797 RETCETR|AQ 0.075 . NCLIV_030520 820 ADSPPLR|SS 0.111 . NCLIV_030520 848 PGLSATR|CS 0.089 . NCLIV_030520 865 EETGEEK|DE 0.059 . NCLIV_030520 868 GEEKDER|ET 0.096 . NCLIV_030520 871 KDERETR|AS 0.186 . ____________________________^_________________

  • Fasta :-

    >NCLIV_030520 ATGGGATCGAAGAAAAAAAACACGCGCGGTCGGCAGGCGGTTCGCGGAAAGTCCGCGAAG GAGAGGCGACAAGAATCCGATAGAGAAGACTGCCAGGGAGACAGGCGCGAGAAGAAAGGG AAGGGGACTCGAAGCGCGCCGTTGGCCTCGTCCTTCGCGTCGCACTTGGAGGCGTACGGC CTCGAGCTGGAACTCATTGCTCCGGACGGCAACTGTCTCTTTCGCGCCTTTGCGGACCAG CACTGCGGCGAGCAGGAGCGCCACCGCGAGTACCGGGAGAAGGCCGTGGACTACATCGAA GCGCATGCAGAGGACTTCAAGTGCTTTCTGGCCGAGGAAGAAGAGAGCTTCAAAAAGTAT GTCAGCCGCATGCGCCGCCTTGGGACCTGGGGCAGCCAGATGGAGCTGCAGGCGCTGAGT CAGGTGTACCAAGTAAGTCTTTTCATCCACGTGGCGAATGCGCCTGGCGAAGACGCGCCG TGGCACGGCATGGCTGGCGGGCATCGAGGCCGCAAGCAGCAAGGCAAGAAGAAAGGCCGA GCAGTCGAGAAGGGCGGAAAGAAACGGAACCTCCGGCGGGATCGCGGGCGGGAGGAAGAC GACGCGGAAGACGTGGAAAGAGAGGAAAGCTGCGAGGCGGAGACGACGCACGAACCAGGC GAAGAGCAAGACTGGAGCATCTGCAAGATGGAGAACTTCTCGGAGGCACAGCCGTGTGTG CAGCTCGCCTTCCACGTCCACCACGAACACTACAACTCGATTCGGGTGAGAGGCCGAGCT CCGGGCGCCATGCTCAGTCTTGCGCAAGTGCGGCGAGTCTTGAAACTGAGCGTAGACGGA GACGAGGAAGCCTCAGAGTGTGCGGAAGCGACAACGGATGGGGAGGCAGCGGCTGCCGAA GAGGAGGCCGGAGAAGGAGTGAAGCGGGAGTTTCTGGAGCAGCCGAGGAAAGAAGCGTGC GCGGGGGAAGGAGAGAGTCATGAGGCGTGCGACGAGACGCAGGCGGAAGAGGCAGCAGAA AGACAGGAAACGAGAGCCAAGGAAGACACAGGAGAGGAGGGAGATCGAGAGAACAGAAGG GCGCCAGACGCAGAAACAGAGACGCAAGGGGCGAAGACAGGAGAGAATGGAGCTGGTGTA TGTACACTCGGCCAGCCAGCGGCTGAGGCGTCGGGCAGCTGTGTGCGAGCGGACGGGCGT CTGTCTCCTGCGGATGGGGGGACTCCGTCGGATGGCGGAGTCGAGGAGCACGAGGAATGC AGGGGCCGCGCGGAAGACGCACCGAGCGACAGTGAGAAGGAGCAAAGCCGAGAGGAAGAC ACCCTGGAGGAAGAGAACGCAGCGAAAGAGAAGGACGGAACAGCAAGCGAGGAAGACACA CGCGACGACACACGAAACGAGACAACAGCTCCGCTTCTCGAGAACGAGGAGACGGCAGAG AAGGCGCCAGAGGGAGGTGAACAGGAGACCGGAGCGAGCGAAGAGAGCGGAGCACGAAAA CGGGGAAAAGAAAAGACGATGCGAGGGAAGGACAGGCCAGACAGCACGGCACCGAGGAGC GGCAGCTCCACGAAGGAAGGCGAGGCTTCCTCAGCATCAGACGAGCGTGGACGACGCGAT ACAGAGCCGCAACACGTGCCATGTTCCCTGTCTTCGTCTTCGTCTTCCTCGTTGCCGGCG GCAGCCTCTTCTTCCTCTTCTGGTTCCCCGTCGTCGTCCTCCGTTTGTTCTCCATTTTCT GCCCCATCTGCCGCGTCTTGTGCCTCCTCAGCCTCGTCTCCTCCCTCTTCCTCATCCGCT CCGTCCTCGGCTTCTCCCGCGTGGTCTGCTCCCTCGTGTTCTTCCTCAGCTGCGTCTCTC AAAGTGCCCGCTGTGGGCGGGTGTGTTTCTGCAGCTTCGAGATGCGCCAAAGTGCGGCGG TCGCGGAGCACTGGGAGCCTCCGTCGGCGCAGATGGGAAAGAGAGGAAGCGTTGCTTTGC TCATCTCGACTGTGTTTCCTTCGGCCTTCTTCAGAGGCCCCGCGTGTCTCGGATTCTGCG CTTCCCGAGAAAGAAACAGCTGGAGAGCATGCGGAGGCGTCTCGCGAGACGCATCCCGCG TCGGGTTTCCCCTCGTGCGGCGCCTCCCGCCGTGGTTCGAGGCGTGCGCAACGAATCGGG GGAGACACCTCTTCTTCCTCGCTGTCGCGTGCTCCTCTTCTCCCAGGGGATTCGGGCAAG ATGCATGCAAGCTCAGCGAACCCGGCGAACGCCGAGGGCGTATGCGCCGTGTTCTTCCCC AGGCGAGTGCTCCGCCGCAACTCCCTGCGCGGCTGTTGTGGCGCCTCTTGTTCTCCCTCG CGTTCTCTGTTCGGACCTTCCTCGTGGGTGCGTGAGACGTGCGAGACTCGCGCACAACTC ACCGCGTCGCCTGGAAACCAAAGTGCTTCGCCGGATGCGGCTGACTCGCCTCCCTTGCGT TCTTCGCTGCTCTGTGCATGCGCGTCCGCCTCTTGTGCACACGGCTCCCCGCCTTCGACT TTTCCTGGACTCTCTGCTACGCGATGCTCCTCCGAGGCTCTGCCGAACGGCGACGAGGAG ACAGGAGAGGAGAAGGACGAACGCGAGACCCGTGCATCACCACTCGTGTGCGTGTGA
  • Download Fasta

  • Fasta :-

    MGSKKKNTRGRQAVRGKSAKERRQESDREDCQGDRREKKGKGTRSAPLASSFASHLEAYG LELELIAPDGNCLFRAFADQHCGEQERHREYREKAVDYIEAHAEDFKCFLAEEEESFKKY VSRMRRLGTWGSQMELQALSQVYQVSLFIHVANAPGEDAPWHGMAGGHRGRKQQGKKKGR AVEKGGKKRNLRRDRGREEDDAEDVEREESCEAETTHEPGEEQDWSICKMENFSEAQPCV QLAFHVHHEHYNSIRVRGRAPGAMLSLAQVRRVLKLSVDGDEEASECAEATTDGEAAAAE EEAGEGVKREFLEQPRKEACAGEGESHEACDETQAEEAAERQETRAKEDTGEEGDRENRR APDAETETQGAKTGENGAGVCTLGQPAAEASGSCVRADGRLSPADGGTPSDGGVEEHEEC RGRAEDAPSDSEKEQSREEDTLEEENAAKEKDGTASEEDTRDDTRNETTAPLLENEETAE KAPEGGEQETGASEESGARKRGKEKTMRGKDRPDSTAPRSGSSTKEGEASSASDERGRRD TEPQHVPCSLSSSSSSSLPAAASSSSSGSPSSSSVCSPFSAPSAASCASSASSPPSSSSA PSSASPAWSAPSCSSSAASLKVPAVGGCVSAASRCAKVRRSRSTGSLRRRRWEREEALLC SSRLCFLRPSSEAPRVSDSALPEKETAGEHAEASRETHPASGFPSCGASRRGSRRAQRIG GDTSSSSLSRAPLLPGDSGKMHASSANPANAEGVCAVFFPRRVLRRNSLRGCCGASCSPS RSLFGPSSWVRETCETRAQLTASPGNQSASPDAADSPPLRSSLLCACASASCAHGSPPST FPGLSATRCSSEALPNGDEETGEEKDERETRASPLVCV

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
NCLIV_030520402 SDGRLSPADG0.998unspNCLIV_030520402 SDGRLSPADG0.998unspNCLIV_030520402 SDGRLSPADG0.998unspNCLIV_030520429 SEDAPSDSEK0.994unspNCLIV_030520431 SAPSDSEKEQ0.997unspNCLIV_030520436 SEKEQSREED0.997unspNCLIV_030520456 SDGTASEEDT0.998unspNCLIV_030520520 STAPRSGSST0.992unspNCLIV_030520523 SRSGSSTKEG0.998unspNCLIV_030520531 SGEASSASDE0.995unspNCLIV_030520533 SASSASDERG0.996unspNCLIV_030520569 SSSSGSPSSS0.995unspNCLIV_030520593 SSSASSPPSS0.992unspNCLIV_030520619 SSSAASLKVP0.99unspNCLIV_030520641 SKVRRSRSTG0.994unspNCLIV_030520643 SRRSRSTGSL0.991unspNCLIV_030520713 SSRRGSRRAQ0.998unspNCLIV_030520727 STSSSSLSRA0.992unspNCLIV_03052018 SVRGKSAKER0.998unspNCLIV_03052026 SRRQESDRED0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India